Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-225b11.1

Gene Name Gene ID Reads Annotation
si:ch211-225b11.1 ENSDARG00000002405 172 si:ch211-225b11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-39]










Genes with expression patterns similar to si:ch211-225b11.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-225b11.1 ENSDARG00000002405 172 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-225b11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-39]
2. BX537137.1 ENSDARG00000092436 77 2.4 - 0.793 - 0.702 - 0.905 - - - gastrula zinc finger protein XlCGF7.1 [Source:NCBI gene;Acc:100148466]
3. CU856237.1 CU856237.1 153 2.293 0.748 0.720 - - - 0.825 - - -
4. stat2 ENSDARG00000031647, ENSDARG00000116348 441 1.78 - 0.894 - - - 0.886 - - - signal transducer and activator of transcription 2 [Source:ZFIN;Acc:ZDB-GENE-080321-1]
5. tmprss13b ENSDARG00000077573 47 1.736 - 0.898 - - - 0.838 - - - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
6. fbxo32 ENSDARG00000040277 93 1.681 - 0.909 - 0.772 - - - - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
7. si:dkey-150k17.3 33 1.677 - 0.782 - - - 0.895 - - - si:dkey-150k17.3
8. tnfrsf1b ENSDARG00000070165 467 1.675 - 0.883 - - - 0.792 - - - tumor necrosis factor receptor superfamily, member 1B [Source:ZFIN;Acc:ZDB-GENE-070410-133]
9. stil ENSDARG00000024904, ENSDARG00000114288, ENSDARG00000116436 324 1.64 0.844 0.796 - - - - - - - scl/tal1 interrupting locus [Source:ZFIN;Acc:ZDB-GENE-020419-39]
10. slc27a6 ENSDARG00000046053 57 1.633 - 0.789 - - 0.844 - - - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
11. kcnk1a ENSDARG00000045067 743 1.631 - 0.790 - - - 0.841 - - - potassium channel, subfamily K, member 1a [Source:ZFIN;Acc:ZDB-GENE-070620-26]
12. rcbtb1 ENSDARG00000036645 255 1.623 - 0.720 - - - 0.903 - - - regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7951]
13. CR848784.2 ENSDARG00000111157 16 1.617 - - - - - 0.899 0.718 - -
14. si:ch73-103l1.2 ENSDARG00000096505 17 1.61 0.711 - - - - 0.899 - - - si:ch73-103l1.2 [Source:ZFIN;Acc:ZDB-GENE-121214-226]
15. esyt1a ENSDARG00000034714 129 1.6 - 0.789 - - - 0.811 - - - extended synaptotagmin-like protein 1a [Source:ZFIN;Acc:ZDB-GENE-090311-55]
16. fam151a ENSDARG00000058218 40 1.584 - 0.798 - - - 0.786 - - - family with sequence similarity 151, member A [Source:ZFIN;Acc:ZDB-GENE-070705-105]
17. adat3 ENSDARG00000005640 96 1.58 - - - - - 0.862 0.718 - - adenosine deaminase, tRNA-specific 3 [Source:ZFIN;Acc:ZDB-GENE-030616-531]
18. ppp1r12c ENSDARG00000052423 183 1.561 - - - 0.718 - 0.843 - - - protein phosphatase 1, regulatory subunit 12C [Source:ZFIN;Acc:ZDB-GENE-010724-11]
19. hsdl1 ENSDARG00000041736 171 1.548 - 0.754 - - - 0.794 - - - hydroxysteroid dehydrogenase like 1 [Source:ZFIN;Acc:ZDB-GENE-041212-31]
20. strumpellin 212 1.548 - 0.842 - - - 0.706 - - - strumpellin
21. si:dkey-152b24.7 ENSDARG00000099715 26 1.543 0.711 - - - - 0.832 - - - si:dkey-152b24.7 [Source:ZFIN;Acc:ZDB-GENE-100921-77]
22. CREB3L4 1085 1.537 - 0.731 - - - 0.806 - - - cAMP responsive element binding protein 3-like 4
23. dock9b ENSDARG00000016311 122 1.537 - 0.760 - - - - 0.777 - - dedicator of cytokinesis 9b [Source:ZFIN;Acc:ZDB-GENE-090916-2]
24. megf11 ENSDARG00000062686 230 1.534 - 0.781 - 0.753 - - - - - multiple EGF-like-domains 11 [Source:ZFIN;Acc:ZDB-GENE-060503-252]
25. snip1 ENSDARG00000087528 275 1.532 - 0.813 - 0.719 - - - - - Smad nuclear interacting protein [Source:ZFIN;Acc:ZDB-GENE-041026-3]
26. FAM98C FAM98C 225 1.525 0.735 - - - 0.790 - - - -
27. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 1.525 0.745 - - 0.780 - - - - - bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
28. BX005421.4 BX005421.4 11 1.511 - 0.793 - - - - 0.718 - -
29. rhbdd1 ENSDARG00000021046 120 1.506 - 0.719 - - - 0.787 - - - rhomboid domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-85]
30. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 1.506 0.729 - - - 0.777 - - - -
31. IPO11 ENSDARG00000054224 616 1.504 0.801 0.703 - - - - - - - importin 11 [Source:ZFIN;Acc:ZDB-GENE-040711-1]
32. mthfd2 ENSDARG00000098646, ENSDARG00000112356, ENSDARG00000117060 179 1.504 - - - 0.730 - 0.774 - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase [Source:ZFIN;Acc:ZDB-GENE-040704-20]
33. camk1db ENSDARG00000017446 47 1.497 - - - 0.779 - - 0.718 - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
34. TRIM14_13 TRIM14_13 18 1.492 0.711 - - - 0.781 - - - -
35. ppp1r37 ENSDARG00000078458 49 1.487 - 0.733 - - 0.754 - - - - protein phosphatase 1, regulatory subunit 37 [Source:ZFIN;Acc:ZDB-GENE-050208-7]
36. flj11011l ENSDARG00000045360, ENSDARG00000114911 332 1.479 - 0.732 - 0.747 - - - - - hypothetical protein FLJ11011-like (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-050113-1]
37. FP325123.1 ENSDARG00000105359 246 1.477 - 0.759 - - - - 0.718 - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
38. dhodh ENSDARG00000051889 401 1.476 - 0.739 - 0.737 - - - - - dihydroorotate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-3157]
39. pkn3 ENSDARG00000079585 521 1.47 - 0.714 - - - 0.756 - - - protein kinase N3 [Source:ZFIN;Acc:ZDB-GENE-030131-1902]
40. tlk1b ENSDARG00000100715 1153 1.465 - 0.761 - - - 0.704 - - - tousled-like kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4933]
41. ZNF784_1 ZNF784_1 155 1.464 - 0.758 - - - 0.706 - - -
42. si:dkey-242k1.6 ENSDARG00000101205 112 1.452 - - - 0.721 0.731 - - - - si:dkey-242k1.6 [Source:ZFIN;Acc:ZDB-GENE-041008-84]
43. clock3 clock3 136 1.431 - 0.711 - 0.720 - - - - -
44. gtpbp1l ENSDARG00000042900 416 1.429 - 0.707 - - - - 0.722 - - GTP binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-041007-2]
45. CR383676.3_1 CR383676.3_1 177 0.947 - 0.947 - - - - - - -
46. abhd5a 130 0.945 - - - - - - 0.945 - - abhydrolase domain containing 5a, transcript variant X1
47. baiap2l1b ENSDARG00000031119 71 0.933 - - - - - 0.933 - - - BAI1-associated protein 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-050417-371]
48. CU019624.1 ENSDARG00000103960 273 0.928 - - - - - 0.928 - - -
49. dkk2 ENSDARG00000076420 553 0.923 - 0.923 - - - - - - - dickkopf WNT signaling pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-14]
50. MMP15 MMP15 88 0.923 - 0.923 - - - - - - -
51. si:ch73-269m14.4 ENSDARG00000086612 20 0.921 - - - - - 0.921 - - - si:ch73-269m14.4 [Source:ZFIN;Acc:ZDB-GENE-120215-94]
52. fastkd1 ENSDARG00000056128 141 0.918 - - - - - 0.918 - - - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
53. BX323854.3 BX323854.3 62 0.918 - 0.918 - - - - - - -
54. trappc11 ENSDARG00000004726 969 0.917 - 0.917 - - - - - - - trafficking protein particle complex 11 [Source:ZFIN;Acc:ZDB-GENE-030131-1723]
55. BX323793.2 BX323793.2 61 0.916 - - - - - 0.916 - - -
56. si:ch211-283e2.7 19 0.916 - - - - - 0.916 - - - si:ch211-283e2.7, transcript variant X2
57. slc22a6l ENSDARG00000055523 370 0.915 - 0.915 - - - - - - - solute carrier family 22 (organic anion transporter), member 6, like [Source:ZFIN;Acc:ZDB-GENE-040426-2249]
58. OPLAH ENSDARG00000045123 707 0.914 - - - - - 0.914 - - - 5-oxoprolinase, ATP-hydrolysing [Source:ZFIN;Acc:ZDB-GENE-121214-293]
59. crygm2d3 ENSDARG00000088823 1560 0.913 - - - - - 0.913 - - - crystallin, gamma M2d3 [Source:ZFIN;Acc:ZDB-GENE-060918-2]
60. TNIP2 ENSDARG00000074501 35 0.912 - - - - - - 0.912 - - TNFAIP3 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-120913-2]
61. haao ENSDARG00000076487 143 0.912 - - - - - 0.912 - - - 3-hydroxyanthranilate 3,4-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-041114-89]
62. mecr ENSDARG00000032326 314 0.91 - 0.910 - - - - - - - mitochondrial trans-2-enoyl-CoA reductase [Source:ZFIN;Acc:ZDB-GENE-050417-399]
63. MIER3 MIER3 114 0.908 - - - - - 0.908 - - -
64. zgc:113425 ENSDARG00000026616 29 0.906 - 0.906 - - - - - - - zgc:113425 [Source:ZFIN;Acc:ZDB-GENE-050320-128]
65. ZFAT ENSDARG00000077987 205 0.905 - - - - - 0.905 - - - zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
66. CABZ01084007.1 CABZ01084007.1 199 0.904 - - - - - 0.904 - - -
67. dyx1c1 dyx1c1 36 0.904 - 0.904 - - - - - - -
68. si:ch73-280o22.2 ENSDARG00000077072 67 0.904 - - - - - 0.904 - - - si:ch73-280o22.2 [Source:ZFIN;Acc:ZDB-GENE-141216-272]
69. si:ch211-59m15.1 87 0.904 - - - - - 0.904 - - - si:ch211-59m15.1
70. spg21 ENSDARG00000007760 409 0.904 - - - - - 0.904 - - - spastic paraplegia 21 (autosomal recessive, Mast syndrome) [Source:ZFIN;Acc:ZDB-GENE-040426-2722]
71. gbp2 ENSDARG00000038669 91 0.904 - - - - - 0.904 - - - guanylate binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070912-618]
72. zgc:113295_1 ENSDARG00000074768, ENSDARG00000103947 21 0.904 - 0.904 - - - - - - - zgc:113295 [Source:ZFIN;Acc:ZDB-GENE-050320-122]
73. pibf1 ENSDARG00000013006, ENSDARG00000015506 151 0.904 - - - - - 0.904 - - - progesterone immunomodulatory binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-94]
74. APOA4_2 APOA4_2 61 0.904 - - - - - 0.904 - - -
75. rdh5 ENSDARG00000008306 272 0.904 - - - - - 0.904 - - - retinol dehydrogenase 5 (11-cis/9-cis) [Source:ZFIN;Acc:ZDB-GENE-050208-411]
76. si:dkey-239i20.4 ENSDARG00000043514, ENSDARG00000114327 178 0.903 - 0.903 - - - - - - - si:dkey-239i20.4 [Source:ZFIN;Acc:ZDB-GENE-030131-2644]
77. ZBTB41 ENSDARG00000054984 464 0.902 - - - - - 0.902 - - - zinc finger and BTB domain containing 41 [Source:ZFIN;Acc:ZDB-GENE-130530-649]
78. naa30 ENSDARG00000079686 814 0.901 - 0.901 - - - - - - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081022-73]
79. RNF223 93 0.901 - 0.901 - - - - - - - ring finger protein 223
80. ZNF648 ENSDARG00000104823 194 0.9 - - - - - 0.900 - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
81. si:ch1073-263o8.2 ENSDARG00000090870 66 0.899 - - - - - 0.899 - - - si:ch1073-263o8.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5362]
82. myo10l3 ENSDARG00000074143 49 0.899 - - - - - 0.899 - - - myosin X-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-237]
83. si:dkey-117i10.1 ENSDARG00000062537 3 0.899 - - - - - 0.899 - - - si:dkey-117i10.1 [Source:ZFIN;Acc:ZDB-GENE-091204-371]
84. si:dkey-201l21.4 ENSDARG00000076398 5 0.899 - - - - - 0.899 - - - si:dkey-201l21.4 [Source:ZFIN;Acc:ZDB-GENE-060531-98]
85. CU104716.1 ENSDARG00000109332 12 0.899 - - - - - 0.899 - - -
86. BX664721.1 ENSDARG00000051804 21 0.899 - - - - - 0.899 - - -
87. chtopb ENSDARG00000070430 29 0.899 - - - - - 0.899 - - - chromatin target of PRMT1b [Source:ZFIN;Acc:ZDB-GENE-061013-712]
88. CT025771.1 ENSDARG00000117721 13 0.899 - - - - - 0.899 - - -
89. si:dkey-263l8.2 si:dkey-263l8.2 3 0.899 - - - - - 0.899 - - -
90. CU633486.1 ENSDARG00000098008 3 0.899 - - - - - 0.899 - - -
91. suv39h1a ENSDARG00000026799 18 0.899 - - - - - 0.899 - - - suppressor of variegation 3-9 homolog 1a [Source:ZFIN;Acc:ZDB-GENE-040801-111]
92. insl5a ENSDARG00000070966, ENSDARG00000112563 45 0.899 - - - - - 0.899 - - - insulin-like 5a [Source:ZFIN;Acc:ZDB-GENE-050310-4]
93. BX004816.2 ENSDARG00000087012 3 0.899 - - - - - 0.899 - - -
94. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 0.899 - - - - - 0.899 - - - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
95. cfhl1 ENSDARG00000105212, ENSDARG00000111582 35 0.899 - - - - - 0.899 - - - complement factor H like 1 [Source:ZFIN;Acc:ZDB-GENE-050208-342]
96. si:dkey-153n9.5 si:dkey-153n9.5 20 0.899 - - - - - 0.899 - - -
97. hephl1 hephl1 20 0.899 - - - - - 0.899 - - -
98. si:ch211-264f7.2 si:ch211-264f7.2 2 0.899 - - - - - 0.899 - - -
99. CABZ01057940.1 CABZ01057940.1 4 0.899 - - - - - 0.899 - - -
100. si:rp71-78h1.1 si:rp71-78h1.1 2 0.899 - - - - - 0.899 - - -

There are 1115 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA