Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-224l10.5

Gene Name Gene ID Reads Annotation
si:ch211-224l10.5 si:ch211-224l10.5 1










Genes with expression patterns similar to si:ch211-224l10.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-128b10.5 si:ch211-128b10.5 3 1 - - - 1.000 - - - - -
2. si:ch211-278f21.5 si:ch211-278f21.5 1 1 - - - 1.000 - - - - -
3. irbp 2 1 - - - 1.000 - - - - - interphotoreceptor retinoid-binding protein, transcript variant X2
4. rfc4 ENSDARG00000042458 2 1 - - - 1.000 - - - - - replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]
5. slc5a5 ENSDARG00000005392 6 1 - - - 1.000 - - - - - solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
6. gucy2f ENSDARG00000025504 6 1 - - - 1.000 - - - - - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
7. si:dkey-4m13.3 6 1 - - - 1.000 - - - - - si:dkey-4m13.3
8. CR318624.1 ENSDARG00000094618 5 1 - - - 1.000 - - - - -
9. cdx1a ENSDARG00000114554 28 1 - - - 1.000 - - - - - caudal type homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050510-1]
10. si:dkey-254e13.13 si:dkey-254e13.13 6 1 - - - 1.000 - - - - -
11. CU367845.1_1 CU367845.1_1 43 1 - - - 1.000 - - - - -
12. nyx ENSDARG00000061791 2 1 - - - 1.000 - - - - - nyctalopin [Source:ZFIN;Acc:ZDB-GENE-061026-3]
13. CRYGM4 ENSDARG00000008219 1 1 - - - 1.000 - - - - - crystallin, gamma M4 [Source:ZFIN;Acc:ZDB-GENE-120312-2]
14. tlr4bb ENSDARG00000022048, ENSDARG00000110914 2 1 - - - 1.000 - - - - - toll-like receptor 4b, duplicate b [Source:ZFIN;Acc:ZDB-GENE-040219-9]
15. TMCC1_1 TMCC1_1 1 1 - - - 1.000 - - - - -
16. kcnf1b ENSDARG00000027285 2 1 - - - 1.000 - - - - - potassium voltage-gated channel, subfamily F, member 1b [Source:ZFIN;Acc:ZDB-GENE-090312-39]
17. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1 - - - 1.000 - - - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
18. si:ch211-210m1.3 si:ch211-210m1.3 2 1 - - - 1.000 - - - - -
19. ms4a17a.1 ENSDARG00000043798 7 1 - - - 1.000 - - - - - membrane-spanning 4-domains, subfamily A, member 17A.1 [Source:ZFIN;Acc:ZDB-GENE-050417-307]
20. BX901974.1 ENSDARG00000067592 2 1 - - - 1.000 - - - - -
21. si:ch211-276k2.2 4 1 - - - 1.000 - - - - - si:ch211-276k2.2
22. CT737190.1 ENSDARG00000091514 1 1 - - - 1.000 - - - - - si:dkey-286h2.5 [Source:NCBI gene;Acc:100536662]
23. si:ch211-81g2.1 si:ch211-81g2.1 5 1 - - - 1.000 - - - - -
24. si:ch211-224l10.5 si:ch211-224l10.5 1 1 - - - 1.000 - - - - -
25. trpc2 trpc2 10 1 - - - 1.000 - - - - -
26. PLCH2 PLCH2 3 1 - - - 1.000 - - - - -
27. tacr3a ENSDARG00000075112 1 1 - - - 1.000 - - - - - tachykinin receptor 3a [Source:ZFIN;Acc:ZDB-GENE-090312-106]
28. CUZD1 CUZD1 2 1 - - - 1.000 - - - - -
29. arf3a ENSDARG00000070539 29 0.993 - - - 0.993 - - - - - ADP-ribosylation factor 3a [Source:ZFIN;Acc:ZDB-GENE-040801-176]
30. si:dkey-233e3.1 si:dkey-233e3.1 7 0.993 - - - 0.993 - - - - -
31. crygm2d14 ENSDARG00000087301 66 0.978 - - - 0.978 - - - - - crystallin, gamma M2d14 [Source:ZFIN;Acc:ZDB-GENE-070822-20]
32. HIST1H4J_2 HIST1H4J_2 12 0.975 - - - 0.975 - - - - -
33. CR933820.2 CR933820.2 152 0.972 - - - 0.972 - - - - -
34. ZDHHC12 ZDHHC12 29 0.972 - - - 0.972 - - - - -
35. GRM5_1 GRM5_1 18 0.968 - - - 0.968 - - - - -
36. CR450686.1 ENSDARG00000091230 2 0.965 - - - 0.965 - - - - -
37. crygm2d5 ENSDARG00000069792 207 0.964 - - - 0.964 - - - - - crystallin, gamma M2d5 [Source:ZFIN;Acc:ZDB-GENE-060918-4]
38. cryaa ENSDARG00000053502, ENSDARG00000113469 80 0.964 - - - 0.964 - - - - - crystallin, alpha A [Source:ZFIN;Acc:ZDB-GENE-020508-1]
39. AL935293.1 AL935293.1 2 0.953 - - - 0.953 - - - - -
40. cryba1a ENSDARG00000041141 8 0.953 - - - 0.953 - - - - - crystallin, beta A1a [Source:ZFIN;Acc:ZDB-GENE-040718-107]
41. zgc:55621 ENSDARG00000010782 3 0.942 - - - 0.942 - - - - - zgc:55621 [Source:ZFIN;Acc:ZDB-GENE-040426-762]
42. zgc:165347 zgc:165347 1358 0.935 - - - 0.935 - - - - -
43. crygn2 ENSDARG00000030411 2551 0.93 - - - 0.930 - - - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
44. fam131ba ENSDARG00000070952 26 0.93 - - - 0.930 - - - - - family with sequence similarity 131, member Ba [Source:ZFIN;Acc:ZDB-GENE-060503-616]
45. celf3b ENSDARG00000006983 171 0.928 - - - 0.928 - - - - - cugbp, Elav-like family member 3b [Source:ZFIN;Acc:ZDB-GENE-110408-50]
46. hapln4 ENSDARG00000018542 10 0.915 - - - 0.915 - - - - - hyaluronan and proteoglycan link protein 4 [Source:ZFIN;Acc:ZDB-GENE-060503-243]
47. foxa ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 6 0.915 - - - 0.915 - - - - - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
48. crygm2d6 ENSDARG00000073874 38 0.915 - - - 0.915 - - - - - crystallin, gamma M2d6 [Source:ZFIN;Acc:ZDB-GENE-040625-145]
49. RGS14 RGS14 15 0.915 - - - 0.915 - - - - -
50. si:ch73-138i16.1 ENSDARG00000095562 8 0.915 - - - 0.915 - - - - - si:ch73-138i16.1 [Source:ZFIN;Acc:ZDB-GENE-070705-208]
51. zgc:86723 zgc:86723 299 0.915 - - - 0.915 - - - - -
52. si:dkey-206f10.1 ENSDARG00000032838 18 0.913 - - - 0.913 - - - - - si:dkey-206f10.1 [Source:ZFIN;Acc:ZDB-GENE-041014-154]
53. crygm2d4 ENSDARG00000087164, ENSDARG00000115295 138 0.91 - - - 0.910 - - - - - crystallin, gamma M2d4 [Source:ZFIN;Acc:ZDB-GENE-060918-3]
54. HIPK1 HIPK1 8 0.909 - - - 0.909 - - - - -
55. crygm2d12 ENSDARG00000069801, ENSDARG00000113681 394 0.909 - - - 0.909 - - - - - crystallin, gamma M2d12 [Source:ZFIN;Acc:ZDB-GENE-070822-19]
56. si:dkey-6n3.3 si:dkey-6n3.3 9 0.909 - - - 0.909 - - - - -
57. zgc:162402 zgc:162402 298 0.906 - - - 0.906 - - - - -
58. si:ch211-120c15.3 ENSDARG00000101807 19 0.904 - - - 0.904 - - - - - si:ch211-120c15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-99]
59. EPS15L1 EPS15L1 22 0.904 - - - 0.904 - - - - -
60. CU469509.2 CU469509.2 4 0.899 - - - 0.899 - - - - -
61. sox11a ENSDARG00000077811 25 0.897 - - - 0.897 - - - - - SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
62. slc25a3a ENSDARG00000027424 11 0.888 - - - 0.888 - - - - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3a [Source:ZFIN;Acc:ZDB-GENE-040426-1673]
63. si:ch211-212n6.16 si:ch211-212n6.16 314 0.886 - - - 0.886 - - - - -
64. def6b ENSDARG00000044524 99 0.879 - - - 0.879 - - - - - differentially expressed in FDCP 6b homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-110408-59]
65. crygm2d13 ENSDARG00000057460 1093 0.877 - - - 0.877 - - - - - crystallin, gamma M2d13 [Source:ZFIN;Acc:ZDB-GENE-040718-105]
66. evx2 ENSDARG00000059255 317 0.868 - - - 0.868 - - - - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
67. chgb ENSDARG00000076500 42 0.862 - - - 0.862 - - - - - chromogranin B [Source:ZFIN;Acc:ZDB-GENE-070705-268]
68. npb ENSDARG00000078828 230 0.859 - - - 0.859 - - - - - neuropeptide B [Source:ZFIN;Acc:ZDB-GENE-040107-40]
69. si:ch211-145g9.7 32 0.858 - - - 0.858 - - - - - si:ch211-145g9.7, transcript variant X1
70. zgc:110053 zgc:110053 69 0.85 - - - 0.850 - - - - -
71. si:dkey-9i5.4 si:dkey-9i5.4 14 0.847 - - - 0.847 - - - - -
72. sc:d0661 sc:d0661 12 0.847 - - - 0.847 - - - - -
73. shox2 ENSDARG00000075713 104 0.843 - - - 0.843 - - - - - short stature homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1457]
74. trim3a ENSDARG00000063711 44 0.836 - - - 0.836 - - - - - tripartite motif containing 3a [Source:ZFIN;Acc:ZDB-GENE-080522-4]
75. kcnh8 ENSDARG00000062640 10 0.829 - - - 0.829 - - - - - potassium voltage-gated channel, subfamily H (eag-related), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-204]
76. helt ENSDARG00000056400 482 0.827 - - - 0.827 - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
77. si:ch211-212n6.18 si:ch211-212n6.18 233 0.818 - - - 0.818 - - - - -
78. xrcc5 ENSDARG00000099298 835 0.818 - - - 0.818 - - - - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
79. si:dkey-272j9.1 si:dkey-272j9.1 10 0.816 - - - 0.816 - - - - -
80. crygm2d7 ENSDARG00000076572, ENSDARG00000116634 229 0.809 - - - 0.809 - - - - - crystallin, gamma M2d7 [Source:ZFIN;Acc:ZDB-GENE-060918-5]
81. RIMBP2_1 RIMBP2_1 57 0.808 - - - 0.808 - - - - -
82. PRKCA_1 ENSDARG00000099841 12 0.802 - - - 0.802 - - - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
83. zgc:163061 ENSDARG00000075538, ENSDARG00000076766 54 0.801 - - - 0.801 - - - - - zgc:163061 [Source:ZFIN;Acc:ZDB-GENE-070410-132]
84. lim2.4 ENSDARG00000015445 791 0.8 - - - 0.800 - - - - - lens intrinsic membrane protein 2.4 [Source:ZFIN;Acc:ZDB-GENE-040718-104]
85. htr6 ENSDARG00000016095 9 0.8 - - - 0.800 - - - - - 5-hydroxytryptamine (serotonin) receptor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7839]
86. zgc:92590 ENSDARG00000040282 13 0.796 - - - 0.796 - - - - - zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
87. crygm2d1 ENSDARG00000087324 258 0.795 - - - 0.795 - - - - - crystallin, gamma M2d1 [Source:ZFIN;Acc:ZDB-GENE-050522-395]
88. prox2 ENSDARG00000041952, ENSDARG00000117137 112 0.795 - - - 0.795 - - - - - prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
89. slc6a2 ENSDARG00000016141 49 0.791 - - - 0.791 - - - - - solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
90. cngb3 cngb3 12 0.79 - - - 0.790 - - - - -
91. crybb1 ENSDARG00000068507 2255 0.784 - - - 0.784 - - - - - crystallin, beta B1 [Source:ZFIN;Acc:ZDB-GENE-010813-1]
92. spo11 ENSDARG00000013837 7 0.782 - - - 0.782 - - - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
93. tmem179b ENSDARG00000069495 17 0.781 - - - 0.781 - - - - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
94. relnl relnl 863 0.777 - - - 0.777 - - - - -
95. C11H1orf116 C11H1orf116 9 0.775 - - - 0.775 - - - - -
96. si:rp71-36d5.4 si:rp71-36d5.4 20 0.77 - - - 0.770 - - - - -
97. crygm2d10 ENSDARG00000087765 358 0.77 - - - 0.770 - - - - - crystallin, gamma M2d10 [Source:ZFIN;Acc:ZDB-GENE-071004-96]
98. mir199-2 mir199-2 38 0.768 - - - 0.768 - - - - -
99. ints8 ENSDARG00000057986 1063 0.766 - - - 0.766 - - - - - integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
100. BX530409.1 BX530409.1 65 0.766 - - - 0.766 - - - - -

There are 34 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA