Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-222m18.4

Gene Name Gene ID Reads Annotation
si:ch211-222m18.4 ENSDARG00000094425 7 si:ch211-222m18.4 [Source:ZFIN;Acc:ZDB-GENE-050419-64]










Genes with expression patterns similar to si:ch211-222m18.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-222m18.4 ENSDARG00000094425 7 6 - 1.000 1.000 1.000 1.000 - - 1.000 1.000 si:ch211-222m18.4 [Source:ZFIN;Acc:ZDB-GENE-050419-64]
2. gig2n gig2n 5 2.372 - - 0.761 0.814 0.797 - - - -
3. baiap2l1a ENSDARG00000029305 30 2 - - 1.000 - - - - - 1.000 BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
4. C22H19orf10 C22H19orf10 1 2 - - - 1.000 - - - - 1.000
5. caps2 ENSDARG00000058486 4 2 - - 1.000 - - - - - 1.000 calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
6. vip ENSDARG00000078247 10 1.986 - - - 1.000 - - - - 0.986 vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
7. btr29 ENSDARG00000099138 5 1.976 - - 0.976 - 1.000 - - - - bloodthirsty-related gene family, member 29 [Source:ZFIN;Acc:ZDB-GENE-090512-2]
8. CR848664.1 CR848664.1 12 1.969 - - - 1.000 - - - - 0.969
9. si:ch73-138e16.1 si:ch73-138e16.1 5 1.906 - 0.906 - - - - - - 1.000
10. ENSDARG00000043008 ENSDARG00000043008 8 1.906 - 0.906 - 1.000 - - - - -
11. CABZ01059408.1 ENSDARG00000116928 24 1.906 - 0.906 - 1.000 - - - - -
12. KCNG4 KCNG4 8 1.828 - - - - 0.868 - - - 0.960
13. CR927050.1 ENSDARG00000099180 5 1.8 - - - 1.000 0.800 - - - -
14. RC3H1 RC3H1 22 1.764 - - - 1.000 - - - - 0.764
15. vwa2 ENSDARG00000075441 44 1.759 - 0.759 - 1.000 - - - - - von Willebrand factor A domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100302-1]
16. CU464087.2 CU464087.2 15 1.72 - - - 1.000 0.720 - - - -
17. fbxo15 ENSDARG00000016897 18 1.694 - 0.936 - - - - - 0.758 - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
18. TRIM14_2 TRIM14_2 15 1.592 - - - 0.814 - - - 0.778 -
19. slc10a4 ENSDARG00000009131 51 1.459 - 0.747 - 0.712 - - - - - solute carrier family 10, member 4 [Source:ZFIN;Acc:ZDB-GENE-041014-249]
20. chd3 ENSDARG00000021405, ENSDARG00000115235 17 1 - - 1.000 - - - - - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
21. zgc:165514_1 ENSDARG00000076214 0 1 - - - 1.000 - - - - - zgc:165514 [Source:ZFIN;Acc:ZDB-GENE-041008-169]
22. RAB3IL1 ENSDARG00000007711 11 1 - - - - 1.000 - - - - RAB3A interacting protein (rabin3)-like 1 [Source:ZFIN;Acc:ZDB-GENE-110921-5]
23. si:dkey-115f9.2 si:dkey-115f9.2 18 1 - - - - - - - 1.000 -
24. CR354540.1 ENSDARG00000004051 10 1 - - 1.000 - - - - - - cytochrome P450, family 7, subfamily A, polypeptide 1b [Source:NCBI gene;Acc:559097]
25. si:dkey-61p9.7 ENSDARG00000068865 3 1 - - 1.000 - - - - - - si:dkey-61p9.7 [Source:ZFIN;Acc:ZDB-GENE-041210-241]
26. CABZ01074888.1 ENSDARG00000107066 1 1 - - 1.000 - - - - - -
27. rad9b ENSDARG00000075632 1 1 - - - - 1.000 - - - - RAD9 checkpoint clamp component B [Source:ZFIN;Acc:ZDB-GENE-040910-3]
28. NMI 3 1 - - - - - - - 1.000 - N-myc (and STAT) interactor
29. si:ch211-59g22.1 si:ch211-59g22.1 0 1 - - - - - - - 1.000 -
30. fgf19 ENSDARG00000098663 12 1 - - - - 1.000 - - - - fibroblast growth factor 19 [Source:ZFIN;Acc:ZDB-GENE-030729-32]
31. si:dkey-8o9.5 si:dkey-8o9.5 6 1 - - - - - - - - 1.000
32. GALNT8 GALNT8 0 1 - - - 1.000 - - - - -
33. si:dkey-201i6.5 si:dkey-201i6.5 3 1 - - - - - - - - 1.000
34. gck ENSDARG00000068006 14 1 - - - 1.000 - - - - - glucokinase (hexokinase 4) [Source:ZFIN;Acc:ZDB-GENE-060825-204]
35. CU655870.1 ENSDARG00000101035 1 1 - - - - - - - - 1.000
36. ptchd1 ENSDARG00000018066 3 1 - - - 1.000 - - - - - patched domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061220-1]
37. si:ch73-341k19.1 ENSDARG00000095946 5 1 - - - - 1.000 - - - - si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
38. USF2 ENSDARG00000020228 3 1 - - - - - - - - 1.000 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
39. BX005265.1 BX005265.1 4 1 - - - - - - - - 1.000
40. si:dkey-25o1.6 si:dkey-25o1.6 5 1 - - - 1.000 - - - - -
41. TOX4 TOX4 0 1 - - - - - - - 1.000 -
42. TMEM121 TMEM121 4 1 - - - 1.000 - - - - -
43. btr20 ENSDARG00000102992 4 1 - - - 1.000 - - - - - bloodthirsty-related gene family, member 20 [Source:ZFIN;Acc:ZDB-GENE-060421-3419]
44. GRAMD3 GRAMD3 4 1 - - 1.000 - - - - - -
45. si:dkey-241l7.2 ENSDARG00000105335 6 1 - - - - 1.000 - - - - si:dkey-241l7.2 [Source:ZFIN;Acc:ZDB-GENE-041014-240]
46. si:dkey-40i22.5 si:dkey-40i22.5 8 1 - - - - 1.000 - - - -
47. HTRA2_4 HTRA2_4 1 1 - - 1.000 - - - - - -
48. si:ch211-222e23.2 si:ch211-222e23.2 1 1 - - - - - - - - 1.000
49. si:ch211-215e19.8 ENSDARG00000098106 1 1 - - - - - - - - 1.000 si:ch211-215e19.8 [Source:ZFIN;Acc:ZDB-GENE-070705-106]
50. wee2 ENSDARG00000012718, ENSDARG00000112246 2 1 - - 1.000 - - - - - - WEE1 homolog 2 (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-030131-5682]
51. CU459084.1 CU459084.1 4 1 - - - 1.000 - - - - -
52. NOD1 ENSDARG00000036308 1 1 - - 1.000 - - - - - - nucleotide-binding oligomerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071116-9]
53. bfb ENSDARG00000005616, ENSDARG00000110364 30 1 - - - - 1.000 - - - - complement component bfb [Source:ZFIN;Acc:ZDB-GENE-990415-34]
54. si:dkey-149m13.4 ENSDARG00000114536 2 1 - - - - - - - - 1.000 si:dkey-149m13.4 [Source:ZFIN;Acc:ZDB-GENE-110914-34]
55. aqp10a ENSDARG00000007086, ENSDARG00000112181 8 1 - - 1.000 - - - - - - aquaporin 10a [Source:ZFIN;Acc:ZDB-GENE-040718-40]
56. ABCC3 ENSDARG00000096662 15 1 - - - 1.000 - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 3 [Source:ZFIN;Acc:ZDB-GENE-050517-16]
57. si:dkey-14d8.7 ENSDARG00000045834 5 1 - - - - - - - 1.000 - si:dkey-14d8.7 [Source:ZFIN;Acc:ZDB-GENE-041210-143]
58. efr3ba ENSDARG00000033516 19 1 - - - - 1.000 - - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
59. nitr2b ENSDARG00000000460, ENSDARG00000114513 2 1 - - - 1.000 - - - - - novel immune-type receptor 2b [Source:ZFIN;Acc:ZDB-GENE-001106-6]
60. QDPR QDPR 11 1 - - - - - - - - 1.000
61. ZNF337_19 ZNF337_19 3 1 - - - - - - - 1.000 -
62. PDE1C_1 PDE1C_1 2 1 - - - 1.000 - - - - -
63. U1_52 U1_52 1 1 - - 1.000 - - - - - -
64. OGN 1 1 - - - - - - - - 1.000 osteoglycin
65. BX649331.1 ENSDARG00000098721 1 1 - - - - 1.000 - - - -
66. si:dkey-113d16.4 si:dkey-113d16.4 1 1 - - 1.000 - - - - - -
67. irbp 2 1 - - 1.000 - - - - - - interphotoreceptor retinoid-binding protein, transcript variant X2
68. CABZ01048549.1 CABZ01048549.1 1 1 - - - - 1.000 - - - -
69. plekho1b ENSDARG00000077499 21 1 - - - 1.000 - - - - - pleckstrin homology domain containing, family O member 1b [Source:ZFIN;Acc:ZDB-GENE-100609-2]
70. si:dkey-11e23.9 ENSDARG00000095586 114 1 - - - 1.000 - - - - - si:dkey-11e23.9 [Source:ZFIN;Acc:ZDB-GENE-041014-301]
71. chia.4 ENSDARG00000008541 14 1 - - - 1.000 - - - - - chitinase, acidic.4 [Source:ZFIN;Acc:ZDB-GENE-030131-9279]
72. v2rc2 ENSDARG00000055952 1 1 - - 1.000 - - - - - - vomeronasal 2 receptor, c2 [Source:ZFIN;Acc:ZDB-GENE-050419-39]
73. CMAS CMAS 10 1 - - - - - - - 1.000 -
74. stoml3a ENSDARG00000079914 4 1 - - - - - - - 1.000 - stomatin (EPB72)-like 3a [Source:ZFIN;Acc:ZDB-GENE-070620-18]
75. adipoqa ENSDARG00000062228 7 1 - - 1.000 - - - - - - adiponectin, C1Q and collagen domain containing, a [Source:ZFIN;Acc:ZDB-GENE-080423-2]
76. si:ch211-114l13.14 si:ch211-114l13.14 0 1 - - - 1.000 - - - - -
77. si:dkey-14o6.10 si:dkey-14o6.10 5 1 - - - - - - - - 1.000
78. manba_1 ENSDARG00000008238 8 1 - - - - - - - 1.000 - mannosidase, beta A, lysosomal [Source:ZFIN;Acc:ZDB-GENE-040426-721]
79. si:dkeyp-80d11.12 ENSDARG00000101728 4 1 - - - 1.000 - - - - - si:dkeyp-80d11.12 [Source:ZFIN;Acc:ZDB-GENE-070424-273]
80. DOCK9 ENSDARG00000114086 3 1 - - - - 1.000 - - - - dedicator of cytokinesis 9 [Source:HGNC Symbol;Acc:HGNC:14132]
81. TMEM8B ENSDARG00000075126 0 1 - - - 1.000 - - - - - transmembrane protein 8B [Source:HGNC Symbol;Acc:HGNC:21427]
82. vcam1a ENSDARG00000078201 1 1 - - - 1.000 - - - - - vascular cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-060503-172]
83. CR753886.1 ENSDARG00000090548 22 1 - - - 1.000 - - - - - prolactin releasing hormone 2 [Source:NCBI gene;Acc:793765]
84. fgl2 fgl2 9 1 - - - 1.000 - - - - -
85. zgc:173729 3 1 - - - - - - - - 1.000 zgc:173729
86. CABZ01024686.1 CABZ01024686.1 1 1 - - - - - - - 1.000 -
87. avpr2l ENSDARG00000076690 3 1 - - - 1.000 - - - - - arginine vasopressin receptor 2, like [Source:ZFIN;Acc:ZDB-GENE-070705-429]
88. si:ch211-283g2.1 ENSDARG00000046091 123 1 - - - - 1.000 - - - - si:ch211-283g2.1 [Source:ZFIN;Acc:ZDB-GENE-060531-57]
89. BX294653.4 BX294653.4 1 1 - - - 1.000 - - - - -
90. si:ch211-150h8.2 si:ch211-150h8.2 0 1 - - - - - - - 1.000 -
91. EGFR EGFR 1 1 - - - - 1.000 - - - -
92. CT583625.3 ENSDARG00000095148 0 1 - - - 1.000 - - - - -
93. CELA1_4 CELA1_4 1 1 - - - - 1.000 - - - -
94. phc2b ENSDARG00000013224 3 1 - - - 1.000 - - - - - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
95. cd4 cd4 4 1 - - 1.000 - - - - - -
96. BX927362.1 ENSDARG00000097469 13 1 - - 1.000 - - - - - -
97. ssh1a ENSDARG00000056780 3 1 - - - 1.000 - - - - - slingshot protein phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-040724-201]
98. CABZ01054391.1 ENSDARG00000103952 2 1 - - - - 1.000 - - - - NACHT, LRR and PYD domains-containing protein 12-like [Source:NCBI gene;Acc:100150280]
99. si:ch211-274k16.4 si:ch211-274k16.4 6 1 - - - - - - - 1.000 -
100. CU633991.1 CU633991.1 16 1 - - - 1.000 - - - - -

There are 711 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA