Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-222k6.1

Gene Name Gene ID Reads Annotation
si:ch211-222k6.1 20 si:ch211-222k6.1, transcript variant X6










Genes with expression patterns similar to si:ch211-222k6.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-222k6.1 20 6 - 1.000 1.000 1.000 1.000 - - 1.000 1.000 si:ch211-222k6.1, transcript variant X6
2. phyh ENSDARG00000086740 88 1.809 - 0.845 0.964 - - - - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
3. CU672227.1 ENSDARG00000105807 15 1.775 - - - - 0.943 - - - 0.832
4. CR388013.3 CR388013.3 45 1.733 - - 0.981 - - - - - 0.752
5. eif2b1_1 ENSDARG00000091402, ENSDARG00000114640 36 1.695 - 0.714 0.981 - - - - - - eukaryotic translation initiation factor 2B, subunit 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040625-25]
6. lonrf1 ENSDARG00000075048 13 1.692 - 0.714 - - 0.978 - - - - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
7. scn1a 8 1.687 - 0.714 - - 0.973 - - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
8. CNTNAP3 ENSDARG00000067824 25 1.685 - 0.714 - - 0.971 - - - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
9. cd151l ENSDARG00000068629 16 1.564 - 0.714 - - - - - - 0.850 CD151 antigen, like [Source:ZFIN;Acc:ZDB-GENE-040426-1868]
10. stim1b ENSDARG00000061560 146 1.54 - - 0.808 - 0.732 - - - - stromal interaction molecule 1b [Source:ZFIN;Acc:ZDB-GENE-060531-4]
11. si:dkey-241l7.10 si:dkey-241l7.10 38 1.534 - 0.781 - - - - - - 0.753
12. CU633740.2 CU633740.2 16 1.532 - 0.766 - - - - - - 0.766
13. znrf3 ENSDARG00000062573 205 1.521 - 0.766 0.755 - - - - - - zinc and ring finger 3 [Source:ZFIN;Acc:ZDB-GENE-070705-263]
14. C1S_1 C1S_1 11 1 - 1.000 - - - - - - -
15. isl2b ENSDARG00000053499 132 1 - 1.000 - - - - - - - ISL LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-990415-133]
16. TRIM14_9 TRIM14_9 5 1 - 1.000 - - - - - - -
17. TKT TKT 298 1 - 1.000 - - - - - - -
18. morn2 ENSDARG00000071360 44 1 - 1.000 - - - - - - - MORN repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-230]
19. xkr6 xkr6 286 1 - 1.000 - - - - - - -
20. PFKFB2 PFKFB2 105 1 - 1.000 - - - - - - -
21. si:ch211-93g21.2 ENSDARG00000092842 56 1 - 1.000 - - - - - - - si:ch211-93g21.2 [Source:ZFIN;Acc:ZDB-GENE-060503-799]
22. si:dkey-199m13.7 ENSDARG00000099837, ENSDARG00000111824 22 1 - 1.000 - - - - - - - si:dkey-199m13.7 [Source:ZFIN;Acc:ZDB-GENE-110914-26]
23. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 1 - 1.000 - - - - - - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
24. AL954698.2 ENSDARG00000102132 28 1 - 1.000 - - - - - - -
25. CABZ01067609.1 CABZ01067609.1 111 1 - 1.000 - - - - - - -
26. SEZ6 SEZ6 262 1 - 1.000 - - - - - - -
27. AK9 ENSDARG00000021913 53 1 - 1.000 - - - - - - - adenylate kinase 9 [Source:ZFIN;Acc:ZDB-GENE-041014-337]
28. sox14 ENSDARG00000070929 352 1 - 1.000 - - - - - - - SRY (sex determining region Y)-box 14 [Source:ZFIN;Acc:ZDB-GENE-051113-268]
29. mb21d2b mb21d2b 84 1 - 1.000 - - - - - - -
30. slc6a6b ENSDARG00000098438 7 1 - 1.000 - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
31. lepb ENSDARG00000045548 1 1 - 1.000 - - - - - - - leptin b [Source:ZFIN;Acc:ZDB-GENE-041210-183]
32. MAP6D1 ENSDARG00000079777 47 1 - 1.000 - - - - - - - MAP6 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-293]
33. nr4a2a ENSDARG00000017007 140 1 - 1.000 - - - - - - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
34. skor1b ENSDARG00000062448, ENSDARG00000112341 282 1 - 1.000 - - - - - - - SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
35. si:dkey-203c4.2 si:dkey-203c4.2 4 1 - 1.000 - - - - - - -
36. si:dkeyp-74a11.3 si:dkeyp-74a11.3 5 0.985 - - - - 0.985 - - - -
37. FGD5_1 FGD5_1 8 0.984 - - 0.984 - - - - - -
38. cdk20 ENSDARG00000003867 27 0.983 - - 0.983 - - - - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
39. zgc:113691 ENSDARG00000038898 36 0.981 - - 0.981 - - - - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
40. si:ch73-186j5.2 ENSDARG00000018301 12 0.98 - - 0.980 - - - - - - si:ch73-186j5.2 [Source:ZFIN;Acc:ZDB-GENE-070705-214]
41. CR749741.5 CR749741.5 6 0.98 - - 0.980 - - - - - -
42. si:dkey-14o18.1 si:dkey-14o18.1 108 0.98 - - 0.980 - - - - - -
43. serpine3 ENSDARG00000057108 49 0.98 - - 0.980 - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
44. CABZ01063402.1 CABZ01063402.1 64 0.98 - - 0.980 - - - - - -
45. tyrobp ENSDARG00000094894 16 0.98 - - 0.980 - - - - - - TYRO protein tyrosine kinase binding protein [Source:ZFIN;Acc:ZDB-GENE-061130-2]
46. mafb ENSDARG00000076520 139 0.979 - 0.979 - - - - - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog b (paralog b) [Source:ZFIN;Acc:ZDB-GENE-141211-38]
47. igfbp6b ENSDARG00000090833 37 0.979 - - 0.979 - - - - - - insulin-like growth factor binding protein 6b [Source:ZFIN;Acc:ZDB-GENE-090521-2]
48. zgc:114037_3 17 0.977 - - 0.977 - - - - - - zgc:114037
49. chrna6 ENSDARG00000055559 60 0.977 - - 0.977 - - - - - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
50. CABZ01067072.1 CABZ01067072.1 17 0.976 - - - - 0.976 - - - -
51. si:dkey-260c8.5 si:dkey-260c8.5 8 0.976 - - - - 0.976 - - - -
52. si:ch211-226h8.14 ENSDARG00000088713, ENSDARG00000116143 75 0.974 - - 0.974 - - - - - - si:ch211-226h8.14 [Source:ZFIN;Acc:ZDB-GENE-050208-470]
53. SNORA32 SNORA32 10 0.973 - - 0.973 - - - - - -
54. strn4 ENSDARG00000102902 24 0.971 - - - - 0.971 - - - - striatin, calmodulin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-070501-3]
55. cep170b ENSDARG00000074636 4 0.971 - - - - 0.971 - - - - centrosomal protein 170B [Source:ZFIN;Acc:ZDB-GENE-131127-515]
56. MYRFL ENSDARG00000101645 15 0.971 - - - - 0.971 - - - - myelin regulatory factor like [Source:ZFIN;Acc:ZDB-GENE-180312-1]
57. BX005305.4 ENSDARG00000114385 6 0.971 - - - - 0.971 - - - - legumain [Source:NCBI gene;Acc:569153]
58. RNaseP_nuc RNaseP_nuc 7 0.971 - - - - 0.971 - - - -
59. ms4a17c.1 ENSDARG00000094643 3 0.971 - - - - 0.971 - - - - membrane-spanning 4-domains, subfamily A, member 17C.1 [Source:ZFIN;Acc:ZDB-GENE-080829-9]
60. chpfb ENSDARG00000078037 30 0.971 - - - - 0.971 - - - - chondroitin polymerizing factor b [Source:ZFIN;Acc:ZDB-GENE-100504-1]
61. BX119910.11 BX119910.11 3 0.971 - - - - 0.971 - - - -
62. zgc:195075 ENSDARG00000060049 4 0.971 - - - - 0.971 - - - - zgc:195075 [Source:ZFIN;Acc:ZDB-GENE-080723-70]
63. MTMR3 ENSDARG00000093364, ENSDARG00000098201 11 0.971 - - - - 0.971 - - - - myotubularin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-091204-465]
64. zgc:162879 ENSDARG00000074163 6 0.971 - - - - 0.971 - - - - zgc:162879 [Source:ZFIN;Acc:ZDB-GENE-070424-92]
65. klc1a ENSDARG00000009796 10 0.97 - - - - 0.970 - - - - kinesin light chain 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1599]
66. ctgfb ENSDARG00000104292 69 0.969 - - - - 0.969 - - - - connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
67. si:dkey-176f19.7 ENSDARG00000103348 10 0.968 - - 0.968 - - - - - - si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
68. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 0.967 - - - - 0.967 - - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
69. BX470196.1 BX470196.1 9 0.966 - - - - 0.966 - - - -
70. CU457778.1 ENSDARG00000098976 38 0.964 - - - - 0.964 - - - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
71. si:dkey-222f8.6 si:dkey-222f8.6 7 0.963 - - 0.963 - - - - - -
72. btd ENSDARG00000099596 88 0.963 - - 0.963 - - - - - - biotinidase [Source:ZFIN;Acc:ZDB-GENE-060825-186]
73. SUSD3 SUSD3 64 0.963 - - 0.963 - - - - - -
74. ZNF337_11 ZNF337_11 11 0.962 - - - - 0.962 - - - -
75. DNAJC30 DNAJC30 47 0.961 - - - - 0.961 - - - -
76. ADAD2 ENSDARG00000105626 6 0.961 - - - - 0.961 - - - - adenosine deaminase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-130530-788]
77. dusp14 ENSDARG00000057625, ENSDARG00000111613 68 0.961 - - 0.961 - - - - - - dual specificity phosphatase 14 [Source:ZFIN;Acc:ZDB-GENE-041010-162]
78. C21HXorf40A C21HXorf40A 216 0.961 - - 0.961 - - - - - -
79. si:dkeyp-53e4.1 ENSDARG00000094558 22 0.96 - - 0.960 - - - - - - si:dkeyp-53e4.1 [Source:ZFIN;Acc:ZDB-GENE-110913-59]
80. wdyhv1 ENSDARG00000070403 42 0.958 - - - - 0.958 - - - - WDYHV motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-848]
81. ODF2 ODF2 6 0.957 - - - 0.957 - - - - -
82. ENKD1 ENSDARG00000043550 44 0.953 - - - - 0.953 - - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
83. arhgap17b ENSDARG00000062263 55 0.952 - - - - 0.952 - - - - Rho GTPase activating protein 17b [Source:ZFIN;Acc:ZDB-GENE-080220-26]
84. SLC15A5 ENSDARG00000089974 18 0.949 - - 0.949 - - - - - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
85. FP016199.1 FP016199.1 43 0.949 - - 0.949 - - - - - -
86. PARP4 ENSDARG00000069934 70 0.948 - - 0.948 - - - - - - poly (ADP-ribose) polymerase family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-387]
87. URB1 ENSDARG00000060308 78 0.947 - - 0.947 - - - - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
88. klhl38 klhl38 44 0.947 - - - - 0.947 - - - -
89. zgc:171673 ENSDARG00000102473 256 0.946 - 0.946 - - - - - - - zgc:171673 [Source:ZFIN;Acc:ZDB-GENE-071004-20]
90. atp8a1 ENSDARG00000063001 146 0.946 - 0.946 - - - - - - - ATPase phospholipid transporting 8A1 [Source:ZFIN;Acc:ZDB-GENE-060929-36]
91. nipsnap3 nipsnap3 76 0.946 - 0.946 - - - - - - -
92. zgc:193811 ENSDARG00000076745 72 0.946 - 0.946 - - - - - - - zgc:193811 [Source:ZFIN;Acc:ZDB-GENE-081022-43]
93. TTBK1_1 TTBK1_1 132 0.946 - 0.946 - - - - - - -
94. CT025771.1 ENSDARG00000117721 13 0.943 - - - - 0.943 - - - -
95. rpap2 ENSDARG00000038397 118 0.942 - 0.942 - - - - - - - RNA polymerase II associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-420]
96. adck3 83 0.942 - 0.942 - - - - - - - aarF domain containing kinase 3
97. nkd3 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 2 0.942 - 0.942 - - - - - - - naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]
98. fuom ENSDARG00000039422 82 0.938 - - 0.938 - - - - - - fucose mutarotase [Source:ZFIN;Acc:ZDB-GENE-030616-618]
99. chst2b ENSDARG00000058585 33 0.936 - - - - 0.936 - - - - carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b [Source:ZFIN;Acc:ZDB-GENE-060720-33]
100. CT583625.2 ENSDARG00000094770 57 0.936 - - - - 0.936 - - - - uncharacterized LOC108181196 [Source:NCBI gene;Acc:108181196]

There are 611 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA