Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-222e20.4

Gene Name Gene ID Reads Annotation
si:ch211-222e20.4 ENSDARG00000092578 39 si:ch211-222e20.4 [Source:ZFIN;Acc:ZDB-GENE-091118-60]










Genes with expression patterns similar to si:ch211-222e20.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-222e20.4 ENSDARG00000092578 39 4 - 1.000 - 1.000 1.000 - - - 1.000 si:ch211-222e20.4 [Source:ZFIN;Acc:ZDB-GENE-091118-60]
2. cpb1 ENSDARG00000045442, ENSDARG00000110762 22 1.726 - 0.910 - - 0.816 - - - - carboxypeptidase B1 (tissue) [Source:ZFIN;Acc:ZDB-GENE-030131-1132]
3. CU207301.2 ENSDARG00000097677 2 1.678 - 0.910 - - 0.768 - - - -
4. GRIN3A ENSDARG00000075802 27 1.678 - 0.910 - - 0.768 - - - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
5. ZNF70_14 ZNF70_14 19 1.593 - - - 0.770 0.823 - - - -
6. SLC28A2 SLC28A2 21 1 - 1.000 - - - - - - -
7. agt ENSDARG00000016412 17 1 - 1.000 - - - - - - - angiotensinogen [Source:ZFIN;Acc:ZDB-GENE-030131-1205]
8. npr1b ENSDARG00000018750 174 0.957 - 0.957 - - - - - - - natriuretic peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-100805-4]
9. cdc25d ENSDARG00000075599 7 0.948 - 0.948 - - - - - - - cell division cycle 25 homolog d [Source:ZFIN;Acc:ZDB-GENE-090313-74]
10. zcchc11 32 0.948 - 0.948 - - - - - - - zinc finger, CCHC domain containing 11, transcript variant X2
11. abca4a ENSDARG00000057169 27 0.948 - 0.948 - - - - - - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
12. bckdhb ENSDARG00000014676 17 0.948 - 0.948 - - - - - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
13. stoml1 ENSDARG00000062142, ENSDARG00000110862 113 0.948 - 0.948 - - - - - - - stomatin (EPB72)-like 1 [Source:ZFIN;Acc:ZDB-GENE-070209-241]
14. ENDOD1_3 ENDOD1_3 9 0.948 - 0.948 - - - - - - -
15. CABZ01058107.1 ENSDARG00000112826 8 0.948 - 0.948 - - - - - - - C-type lectin domain family 4 member M-like [Source:NCBI gene;Acc:110440085]
16. CR450736.2 CR450736.2 5 0.948 - 0.948 - - - - - - -
17. purg ENSDARG00000099187, ENSDARG00000114450 33 0.948 - 0.948 - - - - - - - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]
18. prkg1b ENSDARG00000031702 405 0.948 - 0.948 - - - - - - - protein kinase cGMP-dependent 1b [Source:ZFIN;Acc:ZDB-GENE-080225-40]
19. ftr59 ENSDARG00000095864, ENSDARG00000116989 25 0.948 - 0.948 - - - - - - - finTRIM family, member 59 [Source:ZFIN;Acc:ZDB-GENE-090508-4]
20. vwa1 ENSDARG00000075468 77 0.948 - 0.948 - - - - - - - von Willebrand factor A domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5921]
21. si:dkey-33o22.1 ENSDARG00000087639 21 0.948 - 0.948 - - - - - - - si:dkey-33o22.1 [Source:ZFIN;Acc:ZDB-GENE-091204-221]
22. si:ch73-367f21.5 ENSDARG00000089503 55 0.948 - 0.948 - - - - - - - si:ch73-367f21.5 [Source:ZFIN;Acc:ZDB-GENE-120214-29]
23. zgc:195282 ENSDARG00000079488 475 0.948 - 0.948 - - - - - - - zgc:195282 [Source:ZFIN;Acc:ZDB-GENE-081022-208]
24. grn1 ENSDARG00000089362 20 0.948 - 0.948 - - - - - - - granulin 1 [Source:ZFIN;Acc:ZDB-GENE-060103-1]
25. si:ch211-225p5.3 si:ch211-225p5.3 10 0.948 - 0.948 - - - - - - -
26. zgc:162184 ENSDARG00000077217 47 0.948 - 0.948 - - - - - - - zgc:162184 [Source:ZFIN;Acc:ZDB-GENE-070424-83]
27. wu:fi34b01 38 0.948 - 0.948 - - - - - - - wu:fi34b01
28. CABZ01072557.1 CABZ01072557.1 9 0.948 - 0.948 - - - - - - -
29. si:ch73-338a16.3 ENSDARG00000101159 18 0.914 - 0.914 - - - - - - - si:ch73-338a16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-227]
30. CT027674.1 ENSDARG00000106606 11 0.91 - 0.910 - - - - - - - probable E3 ubiquitin-protein ligase TRIML1 [Source:NCBI gene;Acc:108191962]
31. mamdc2a ENSDARG00000098345 21 0.91 - 0.910 - - - - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
32. ERICH1 18 0.91 - 0.910 - - - - - - - glutamate rich 1
33. st8sia1 ENSDARG00000098221 34 0.91 - 0.910 - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
34. C2CD4A ENSDARG00000061416 61 0.91 - 0.910 - - - - - - - C2 calcium dependent domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-030131-5712]
35. sftpba ENSDARG00000094708 2 0.91 - 0.910 - - - - - - - surfactant protein Ba [Source:ZFIN;Acc:ZDB-GENE-091204-378]
36. KLF10 1 0.91 - 0.910 - - - - - - - Kruppel-like factor 10
37. ptger4a ENSDARG00000059236 13 0.91 - 0.910 - - - - - - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
38. gc2 ENSDARG00000018329 0 0.91 - 0.910 - - - - - - - guanylyl cyclase 2 [Source:ZFIN;Acc:ZDB-GENE-011128-8]
39. gria3b ENSDARG00000037498, ENSDARG00000111839 2 0.91 - 0.910 - - - - - - - glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
40. gata1b ENSDARG00000059130 151 0.91 - 0.910 - - - - - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
41. HIST1H4J_2 HIST1H4J_2 12 0.91 - 0.910 - - - - - - -
42. BIN3 ENSDARG00000099651 5 0.91 - 0.910 - - - - - - - bridging integrator 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2696]
43. slc1a3b ENSDARG00000043148 431 0.91 - 0.910 - - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
44. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 0.91 - 0.910 - - - - - - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
45. mir457b 21 0.91 - 0.910 - - - - - - - microRNA 457b
46. TNFRSF14_1 TNFRSF14_1 165 0.91 - 0.910 - - - - - - -
47. si:dkey-113d16.9 si:dkey-113d16.9 345 0.91 - 0.910 - - - - - - -
48. tsen54 ENSDARG00000036844 11 0.91 - 0.910 - - - - - - - TSEN54 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050522-454]
49. cacna1c ENSDARG00000008398 193 0.91 - 0.910 - - - - - - - calcium channel, voltage-dependent, L type, alpha 1C subunit [Source:ZFIN;Acc:ZDB-GENE-020129-1]
50. adcyap1a ENSDARG00000004015 67 0.91 - 0.910 - - - - - - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
51. zgc:193690 34 0.91 - 0.910 - - - - - - - zgc:193690
52. elfn1b ENSDARG00000074372 25 0.91 - 0.910 - - - - - - - extracellular leucine-rich repeat and fibronectin type III domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080327-21]
53. prph2a ENSDARG00000038018 2 0.91 - 0.910 - - - - - - - peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
54. CABZ01056052.1 ENSDARG00000110748 3 0.91 - 0.910 - - - - - - -
55. CABZ01088365.1 CABZ01088365.1 66 0.91 - 0.910 - - - - - - -
56. s100t ENSDARG00000055589 453 0.91 - 0.910 - - - - - - - S100 calcium binding protein T [Source:ZFIN;Acc:ZDB-GENE-050320-61]
57. C25H12orf29 C25H12orf29 31 0.91 - 0.910 - - - - - - -
58. PPP2R5B ENSDARG00000054931 213 0.91 - 0.910 - - - - - - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
59. ano8a ENSDARG00000076265 20 0.91 - 0.910 - - - - - - - anoctamin 8a [Source:ZFIN;Acc:ZDB-GENE-070912-583]
60. NLRC5 ENSDARG00000024631 11 0.91 - 0.910 - - - - - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
61. itln1 ENSDARG00000007534 8 0.91 - 0.910 - - - - - - - intelectin 1 [Source:ZFIN;Acc:ZDB-GENE-060929-564]
62. si:rp71-45g20.6 si:rp71-45g20.6 19 0.91 - 0.910 - - - - - - -
63. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 0.91 - 0.910 - - - - - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
64. caps2 ENSDARG00000058486 4 0.91 - 0.910 - - - - - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
65. si:ch73-62b13.1 ENSDARG00000093269 11 0.91 - 0.910 - - - - - - - si:ch73-62b13.1 [Source:ZFIN;Acc:ZDB-GENE-050420-366]
66. si:dkey-70b24.7 si:dkey-70b24.7 5 0.91 - 0.910 - - - - - - -
67. fancf ENSDARG00000019250 111 0.91 - 0.910 - - - - - - - FA complementation group F [Source:ZFIN;Acc:ZDB-GENE-060306-3]
68. rnf217 ENSDARG00000060944 10 0.91 - 0.910 - - - - - - - ring finger protein 217 [Source:ZFIN;Acc:ZDB-GENE-060503-400]
69. slc18b1 ENSDARG00000044047 7 0.91 - 0.910 - - - - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
70. SYNDIG1 ENSDARG00000100751 165 0.91 - 0.910 - - - - - - - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
71. CABZ01038708.1 CABZ01038708.1 28 0.91 - 0.910 - - - - - - -
72. CU459094.1 ENSDARG00000110517 17 0.91 - 0.910 - - - - - - - uncharacterized LOC108191666 [Source:NCBI gene;Acc:108191666]
73. ctskl ctskl 17 0.91 - 0.910 - - - - - - -
74. KBTBD11 ENSDARG00000104958 8 0.91 - 0.910 - - - - - - - kelch repeat and BTB (POZ) domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-130530-678]
75. BX511034.2 ENSDARG00000071636 31 0.91 - 0.910 - - - - - - - novel protein similar to vertebrate amiloride-sensitive cation channel 2 neuronal (ACCN2) [Source:NCBI gene;Acc:100151078]
76. fgd5a ENSDARG00000088801 3 0.91 - 0.910 - - - - - - - FYVE, RhoGEF and PH domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-090428-3]
77. b3gat2 ENSDARG00000030733 348 0.91 - 0.910 - - - - - - - beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
78. trim35-27 ENSDARG00000035009 62 0.91 - 0.910 - - - - - - - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
79. elk4 ENSDARG00000077092 19 0.91 - 0.910 - - - - - - - ELK4, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-1]
80. APEX2 ENSDARG00000008472 7 0.91 - 0.910 - - - - - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
81. pcdh8 ENSDARG00000006467 317 0.91 - 0.910 - - - - - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
82. DHX32 DHX32 181 0.91 - 0.910 - - - - - - -
83. sebox ENSDARG00000042526 2 0.91 - 0.910 - - - - - - - SEBOX homeobox [Source:ZFIN;Acc:ZDB-GENE-021206-4]
84. CR628323.3 ENSDARG00000106158 1 0.91 - 0.910 - - - - - - - tumor protein p53 inducible protein 3 [Source:NCBI gene;Acc:796473]
85. ccdc129 37 0.91 - 0.910 - - - - - - - coiled-coil domain containing 129, transcript variant X2
86. olfcg4 ENSDARG00000099773 1 0.91 - 0.910 - - - - - - - olfactory receptor C family, g4 [Source:ZFIN;Acc:ZDB-GENE-060503-66]
87. si:ch211-15o14.2 si:ch211-15o14.2 6 0.91 - 0.910 - - - - - - -
88. gria4a ENSDARG00000037496 88 0.91 - 0.910 - - - - - - - glutamate receptor, ionotropic, AMPA 4a [Source:ZFIN;Acc:ZDB-GENE-020125-7]
89. mab21l3 ENSDARG00000076013, ENSDARG00000112160 35 0.91 - 0.910 - - - - - - - mab-21-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-242]
90. slc22a7b slc22a7b 11 0.91 - 0.910 - - - - - - -
91. st6galnac1.1 ENSDARG00000043814 95 0.91 - 0.910 - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041014-160]
92. zgc:171482 ENSDARG00000074415 0 0.91 - 0.910 - - - - - - - zgc:171482 [Source:ZFIN;Acc:ZDB-GENE-080204-84]
93. GABRR1 ENSDARG00000043902 71 0.91 - 0.910 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
94. U6_11 U6_11 0 0.91 - 0.910 - - - - - - -
95. si:dkey-79f11.1 si:dkey-79f11.1 91 0.91 - 0.910 - - - - - - -
96. MSH4 ENSDARG00000075826 37 0.91 - 0.910 - - - - - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
97. CDCP1 ENSDARG00000110186 0 0.91 - 0.910 - - - - - - - CUB domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:24357]
98. fgf9 ENSDARG00000078625 2 0.91 - 0.910 - - - - - - - fibroblast growth factor 9 [Source:ZFIN;Acc:ZDB-GENE-070424-238]
99. trim35-3_1 ENSDARG00000052255 6 0.91 - 0.910 - - - - - - - tripartite motif containing 35-3 [Source:ZFIN;Acc:ZDB-GENE-070912-56]
100. cabp2a ENSDARG00000052016 19 0.91 - 0.910 - - - - - - - calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]

There are 411 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA