Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-220i18.4

Gene Name Gene ID Reads Annotation
si:ch211-220i18.4 ENSDARG00000030262 10 si:ch211-220i18.4 [Source:ZFIN;Acc:ZDB-GENE-090312-151]










Genes with expression patterns similar to si:ch211-220i18.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-220i18.4 ENSDARG00000030262 10 7 1.000 1.000 1.000 1.000 - - 1.000 1.000 1.000 si:ch211-220i18.4 [Source:ZFIN;Acc:ZDB-GENE-090312-151]
2. si:dkey-66g10.2 ENSDARG00000092845 28 2.691 - 0.792 0.899 - - - 1.000 - - si:dkey-66g10.2 [Source:ZFIN;Acc:ZDB-GENE-090313-321]
3. LRTM1 ENSDARG00000098742 21 2 - 1.000 - - - - 1.000 - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
4. il2rga ENSDARG00000068858, ENSDARG00000110645 32 1.917 0.934 - - 0.983 - - - - - interleukin 2 receptor, gamma a [Source:ZFIN;Acc:ZDB-GENE-080402-1]
5. BX511266.1 BX511266.1 21 1.903 - 0.903 - - - - 1.000 - -
6. si:dkeyp-35e5.5 ENSDARG00000104026 3 1.903 - 0.903 - 1.000 - - - - - si:dkeyp-35e5.5 [Source:ZFIN;Acc:ZDB-GENE-050420-335]
7. si:dkey-196j8.2 ENSDARG00000093874 55 1.869 - 0.869 - 1.000 - - - - - si:dkey-196j8.2 [Source:ZFIN;Acc:ZDB-GENE-081107-58]
8. si:dkey-176g4.5 si:dkey-176g4.5 4 1.847 - - - - - - 1.000 - 0.847
9. si:ch211-133l5.7 ENSDARG00000095633 3 1.832 0.832 - - - - - 1.000 - - si:ch211-133l5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-117]
10. si:dkey-14d8.19 si:dkey-14d8.19 12 1.832 0.832 - - - - - 1.000 - -
11. GMNC ENSDARG00000068719 28 1.825 - 0.825 - - - - 1.000 - - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
12. si:dkey-211f1.2 si:dkey-211f1.2 11 1.82 - - 0.894 0.926 - - - - -
13. grapa ENSDARG00000005414 29 1.82 - - - - - - 1.000 0.820 - GRB2 related adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-050522-347]
14. SLC7A8 SLC7A8 25 1.794 - - - - - - 1.000 0.794 -
15. ela2 ENSDARG00000056744, ENSDARG00000111667 73 1.792 - 0.792 - - - - 1.000 - - elastase 2 [Source:ZFIN;Acc:ZDB-GENE-041117-1]
16. amn ENSDARG00000062947 36 1.782 - - - 0.782 - - 1.000 - - amnion associated transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-060810-59]
17. si:dkey-1d7.3 ENSDARG00000075837 18 1.779 - 0.903 - - - - 0.876 - - si:dkey-1d7.3 [Source:ZFIN;Acc:ZDB-GENE-091118-46]
18. CDR2_1 CDR2_1 8 1.765 - 0.765 - - - - - 1.000 -
19. wdr4 ENSDARG00000090581 42 1.755 0.852 0.903 - - - - - - - WD repeat domain 4 [Source:ZFIN;Acc:ZDB-GENE-060810-10]
20. zgc:172128 ENSDARG00000101883, ENSDARG00000104208 28 1.735 0.832 0.903 - - - - - - - zgc:172128 [Source:ZFIN;Acc:ZDB-GENE-080220-2]
21. si:ch211-238e22.4 ENSDARG00000094500 78 1.729 0.729 1.000 - - - - - - - si:ch211-238e22.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3632]
22. FHDC1_3 FHDC1_3 66 1.725 - - 0.725 - - - 1.000 - -
23. cpeb1b ENSDARG00000008454 37 1.714 - - 0.940 0.774 - - - - - cytoplasmic polyadenylation element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-990927-1]
24. CU633991.1 CU633991.1 16 1.705 - 0.705 - - - - 1.000 - -
25. si:ch211-39i19.5 si:ch211-39i19.5 6 1.699 - - - 0.875 - - - - 0.824
26. EP400 ENSDARG00000100965 45 1.659 0.755 0.904 - - - - - - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
27. si:dkey-220o21.2 si:dkey-220o21.2 19 1.648 - 0.903 - - - - 0.745 - -
28. CCDC83 ENSDARG00000077179 29 1.647 - 0.903 0.744 - - - - - - coiled-coil domain containing 83 [Source:ZFIN;Acc:ZDB-GENE-130723-1]
29. hsd11b2 ENSDARG00000001975 245 1.635 - 0.764 - - - - 0.871 - - hydroxysteroid (11-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6030]
30. si:ch211-274p24.4 ENSDARG00000087088 36 1.627 - 0.783 - - - - 0.844 - - si:ch211-274p24.4 [Source:ZFIN;Acc:ZDB-GENE-091204-337]
31. btbd3a ENSDARG00000005544 595 1.525 - 0.817 0.708 - - - - - - BTB (POZ) domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-090312-7]
32. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 1.451 0.706 0.745 - - - - - - - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
33. grn1 ENSDARG00000089362 20 1 - - - - - - 1.000 - - granulin 1 [Source:ZFIN;Acc:ZDB-GENE-060103-1]
34. si:dkey-25o1.6 si:dkey-25o1.6 5 1 - - - - - - 1.000 - -
35. vps13d ENSDARG00000017986 183 1 - 1.000 - - - - - - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
36. si:ch73-44m9.2 ENSDARG00000094821 101 1 - - - - - - 1.000 - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
37. zmat4b ENSDARG00000061419 7 1 - - - - - - 1.000 - - zinc finger, matrin-type 4b [Source:ZFIN;Acc:ZDB-GENE-091118-68]
38. pls1 ENSDARG00000039272 39 1 - - - - - - 1.000 - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
39. star ENSDARG00000006137 149 1 - - - - - - 1.000 - - steroidogenic acute regulatory protein [Source:ZFIN;Acc:ZDB-GENE-001120-3]
40. FAM188B2 4 1 - - - - - - 1.000 - - family with sequence similarity 188, member B2
41. CR589947.1 ENSDARG00000079269 5 1 - - - - - - - 1.000 -
42. si:ch211-165l15.1 si:ch211-165l15.1 10 1 - - - - - - 1.000 - -
43. si:dkey-16p6.1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 0 1 - - - - - - 1.000 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
44. HEPACAM ENSDARG00000112032 1 1 - - - - - - 1.000 - - hepatic and glial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:26361]
45. Telomerase-vert Telomerase-vert 8 1 - - - - - - 1.000 - -
46. nceh1a ENSDARG00000020427 35 1 - - - - - - 1.000 - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
47. pax7a ENSDARG00000100398, ENSDARG00000111233 37 1 - - - - - - - 1.000 - paired box 7a [Source:ZFIN;Acc:ZDB-GENE-990415-201]
48. RBBP6_9 RBBP6_9 1 1 - - - - - - 1.000 - -
49. lyve1b ENSDARG00000062483 14 1 - - - - - - 1.000 - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
50. si:dkey-253d23.8 ENSDARG00000094427 26 1 - - - - - - 1.000 - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
51. RBBP6_2 RBBP6_2 23 1 - - - - - - 1.000 - -
52. cep68 ENSDARG00000039411 30 1 - - - - - - 1.000 - - centrosomal protein 68 [Source:ZFIN;Acc:ZDB-GENE-030616-565]
53. zgc:136461 ENSDARG00000093844, ENSDARG00000114728 1 1 - - - - - - 1.000 - - zgc:136461 [Source:ZFIN;Acc:ZDB-GENE-060519-7]
54. si:dkey-14o1.18 si:dkey-14o1.18 23 1 - 1.000 - - - - - - -
55. zgc:173577 ENSDARG00000098923 71 1 - - - - - - 1.000 - - zgc:173577 [Source:ZFIN;Acc:ZDB-GENE-071004-55]
56. tmprss13b ENSDARG00000077573 47 1 - - - - - - 1.000 - - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
57. si:dkey-162h11.3 41 1 - - 1.000 - - - - - - si:dkey-162h11.3, transcript variant X2
58. si:dkey-114e9.1 si:dkey-114e9.1 233 1 - - - - - - 1.000 - -
59. ccdc85a ENSDARG00000039497 24 1 - - - - - - 1.000 - - coiled-coil domain containing 85A [Source:ZFIN;Acc:ZDB-GENE-080220-55]
60. nsun5_1 ENSDARG00000043209 3 1 - - - 1.000 - - - - - NOP2/Sun domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2476]
61. SVEP1 ENSDARG00000013526 16 1 - - - 1.000 - - - - - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-110726-1]
62. si:rp71-1f1.6 ENSDARG00000110278 0 1 - - - - - - 1.000 - - si:rp71-1f1.6 [Source:ZFIN;Acc:ZDB-GENE-040724-256]
63. SCARNA14 SCARNA14 2 1 - - 1.000 - - - - - -
64. si:dkey-85k15.4 ENSDARG00000095047 25 1 - - - - - - 1.000 - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
65. ccdc147 ccdc147 39 1 - - - - - - 1.000 - -
66. irf4a ENSDARG00000006560 4 1 - - - - - - - 1.000 - interferon regulatory factor 4a [Source:ZFIN;Acc:ZDB-GENE-070912-330]
67. CABZ01038329.1 CABZ01038329.1 8 1 - - - - - - 1.000 - -
68. wisp2 ENSDARG00000077882 3 1 - - - - - - 1.000 - - WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1]
69. HEXDC ENSDARG00000061216, ENSDARG00000116903 83 1 - - - - - - 1.000 - - hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing [Source:ZFIN;Acc:ZDB-GENE-060929-448]
70. tuba7l ENSDARG00000104643 33 1 - - - - - - 1.000 - - tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
71. sycp1 ENSDARG00000003904 8 1 - - - - - - 1.000 - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
72. gstp2 ENSDARG00000103019 9 1 - - - - - - 1.000 - - glutathione S-transferase pi 2 [Source:ZFIN;Acc:ZDB-GENE-050601-1]
73. try 21 1 - - - - - - 1.000 - - trypsin
74. DEPDC7 19 1 - - - 1.000 - - - - - DEP domain containing 7, transcript variant X1
75. TNFRSF25 TNFRSF25 6 1 - - - - - - - 1.000 -
76. glipr1b ENSDARG00000030078 73 1 - - - - - - 1.000 - - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
77. MSH4 ENSDARG00000075826 37 1 - - - - - - 1.000 - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
78. abcc12 ENSDARG00000013050 27 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 12 [Source:ZFIN;Acc:ZDB-GENE-050517-25]
79. cacng7a ENSDARG00000063006 2 1 - - - - - - 1.000 - - calcium channel, voltage-dependent, gamma subunit 7a [Source:ZFIN;Acc:ZDB-GENE-060503-814]
80. LRRC2 LRRC2 23 1 - - - - - - 1.000 - -
81. med8 ENSDARG00000114425 7 1 - - - - - - 1.000 - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
82. AL935296.1 AL935296.1 4 1 - - - - - - - 1.000 -
83. CT030712.1 ENSDARG00000044355 83 1 - - - - - - 1.000 - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
84. GSC2 GSC2 3 1 - - - - - - 1.000 - -
85. ak7b ENSDARG00000017023 25 1 - - - - - - 1.000 - - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
86. tti2 ENSDARG00000073773 19 1 - - - - - - 1.000 - - TELO2 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-110411-25]
87. BX470200.1 BX470200.1 1 1 - - - - - - 1.000 - -
88. sync ENSDARG00000035944 8 1 - - - - - - 1.000 - - syncoilin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-060503-747]
89. si:ch211-235f1.3 ENSDARG00000095179 27 1 - - - - - - 1.000 - - si:ch211-235f1.3 [Source:ZFIN;Acc:ZDB-GENE-091204-440]
90. flt3 ENSDARG00000058503 32 1 - - - - - - 1.000 - - fms-related tyrosine kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050114-4]
91. si:ch211-120k19.3 si:ch211-120k19.3 5 1 - - - - - - 1.000 - -
92. si:ch211-39n21.1 si:ch211-39n21.1 0 1 - - - - - - 1.000 - -
93. CABZ01074298.1 ENSDARG00000087767 6 1 - - - - - - 1.000 - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
94. CABZ01054405.2 CABZ01054405.2 46 1 - - - - - - 1.000 - -
95. CR790369.2 CR790369.2 0 1 - - - - - - 1.000 - -
96. fabp10a ENSDARG00000038439 4 1 - - - - - - 1.000 - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
97. UNC119 UNC119 104 1 - - - - - - 1.000 - -
98. zgc:194659 ENSDARG00000079347 17 1 - - - - - - 1.000 - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
99. si:dkey-58f10.13 ENSDARG00000095532 11 1 - - - - - - 1.000 - - si:dkey-58f10.13 [Source:ZFIN;Acc:ZDB-GENE-060526-315]
100. ptger4a ENSDARG00000059236 13 1 - - - - - - 1.000 - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]

There are 1032 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA