Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-220f16.2

Gene Name Gene ID Reads Annotation
si:ch211-220f16.2 ENSDARG00000007976 638 si:ch211-220f16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-199]










Genes with expression patterns similar to si:ch211-220f16.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-220f16.2 ENSDARG00000007976 638 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-220f16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-199]
2. CABZ01100187.1 CABZ01100187.1 191 1.832 0.956 - - - - 0.876 - - -
3. DSCAML1 ENSDARG00000098057 321 1.725 0.856 - - - - 0.869 - - - Down syndrome cell adhesion molecule like 1 [Source:ZFIN;Acc:ZDB-GENE-110601-1]
4. abhd14a ENSDARG00000058367 546 1.716 0.841 - - - - 0.875 - - - abhydrolase domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-040426-2428]
5. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 1.715 0.871 - - - - 0.844 - - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
6. CABZ01038494.1 ENSDARG00000088258 908 1.69 0.964 - - - - 0.726 - - - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
7. mapk8ip2 ENSDARG00000063157 467 1.679 - - - 0.856 - 0.823 - - - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
8. stx2a ENSDARG00000004618 271 1.662 0.958 0.704 - - - - - - - syntaxin 2a [Source:ZFIN;Acc:ZDB-GENE-040801-80]
9. rapgef1a ENSDARG00000043593 416 1.632 0.873 - - - - 0.759 - - - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
10. MAP6 MAP6 643 1.63 - - - - - 0.888 - 0.742 -
11. si:dkey-96h14.3 si:dkey-96h14.3 355 1.621 0.909 - - - - 0.712 - - -
12. CR457447.1 ENSDARG00000097243 693 1.615 - - - - - 0.798 0.817 - - uncharacterized LOC110437905 [Source:NCBI gene;Acc:110437905]
13. mirlet7a-1 105 1.613 0.768 - - - - 0.845 - - - microRNA let7a-1
14. zgc:113294 ENSDARG00000032285 132 1.61 - - - - - 0.862 - 0.748 - zgc:113294 [Source:ZFIN;Acc:ZDB-GENE-050320-124]
15. map4k3a ENSDARG00000087742 771 1.6 0.789 0.811 - - - - - - - mitogen-activated protein kinase kinase kinase kinase 3a [Source:ZFIN;Acc:ZDB-GENE-130329-1]
16. elk1 ENSDARG00000078066 414 1.598 - - - 0.734 - 0.864 - - - ELK1, member of ETS oncogene family [Source:ZFIN;Acc:ZDB-GENE-090529-5]
17. flrt3 ENSDARG00000076895 3516 1.597 - - - - - 0.877 0.720 - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
18. bmp2a ENSDARG00000013409 303 1.589 0.858 - - - - 0.731 - - - bone morphogenetic protein 2a [Source:ZFIN;Acc:ZDB-GENE-980526-388]
19. LMLN ENSDARG00000061265 1618 1.586 - 0.751 - - - 0.835 - - - leishmanolysin-like (metallopeptidase M8 family) [Source:ZFIN;Acc:ZDB-GENE-081104-298]
20. GSG2 GSG2 1162 1.583 - - - - - 0.793 - 0.790 -
21. med25 ENSDARG00000038005, ENSDARG00000115713 1305 1.571 - - - - - 0.838 0.733 - - mediator complex subunit 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2850]
22. nf2b ENSDARG00000025567 1441 1.561 - - - 0.729 - 0.832 - - - neurofibromin 2b (merlin) [Source:ZFIN;Acc:ZDB-GENE-040622-3]
23. bbs7 ENSDARG00000059911 165 1.56 0.818 - - - - 0.742 - - - Bardet-Biedl syndrome 7 [Source:ZFIN;Acc:ZDB-GENE-030219-90]
24. CEP192 CEP192 978 1.559 - 0.831 - - - - 0.728 - -
25. nexmifb ENSDARG00000029296 416 1.557 - - - 0.710 - 0.847 - - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
26. C8H1orf194 C8H1orf194 111 1.545 - - - 0.750 - 0.795 - - -
27. plk2b ENSDARG00000019130, ENSDARG00000111402 328 1.534 - - - 0.745 - 0.789 - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
28. KDM4C ENSDARG00000061504, ENSDARG00000111347, ENSDARG00000114179 383 1.533 - - - 0.800 - 0.733 - - - lysine (K)-specific demethylase 4C [Source:ZFIN;Acc:ZDB-GENE-070209-38]
29. LIN9 ENSDARG00000028475 227 1.532 - - 0.702 - - 0.830 - - - lin-9 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-030131-1747]
30. SACM1L SACM1L 416 1.531 - - - 0.702 - 0.829 - - -
31. zgc:113348 ENSDARG00000103795 1351 1.53 0.813 - - - - 0.717 - - - zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
32. si:ch211-267e7.3 ENSDARG00000075487 281 1.527 0.752 - - 0.775 - - - - - si:ch211-267e7.3 [Source:ZFIN;Acc:ZDB-GENE-070912-265]
33. slc7a6os ENSDARG00000010596 1599 1.527 - 0.788 - - - 0.739 - - - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
34. LRRC8A LRRC8A 406 1.526 - 0.765 - - - 0.761 - - -
35. sppl2 ENSDARG00000030448 1040 1.52 - - - - - 0.806 0.714 - - signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
36. TMEM66 TMEM66 487 1.516 0.799 - - - - - 0.717 - -
37. si:ch211-113e8.10 ENSDARG00000079631 498 1.511 - - - 0.747 - 0.764 - - - si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
38. mad2l1 ENSDARG00000004713 3398 1.504 - - - - - 0.742 0.762 - - MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
39. AL929204.1 AL929204.1 773 1.496 - - - - - 0.792 0.704 - -
40. ftsj1 ENSDARG00000057089, ENSDARG00000112096 551 1.488 - - - - - 0.720 0.768 - - FtsJ RNA methyltransferase homolog 1 [Source:ZFIN;Acc:ZDB-GENE-041114-83]
41. prrc2c ENSDARG00000057583, ENSDARG00000116399 1673 1.475 0.713 - - - - 0.762 - - - proline-rich coiled-coil 2C [Source:ZFIN;Acc:ZDB-GENE-081104-156]
42. BX088711.1 BX088711.1 125 1.467 0.716 - - - - 0.751 - - -
43. wu:fd44f01 wu:fd44f01 391 1.464 - - - - - 0.761 - 0.703 -
44. csmd2 ENSDARG00000001559 203 1.461 - 0.757 - - - - - 0.704 - CUB and Sushi multiple domains 2 [Source:ZFIN;Acc:ZDB-GENE-030616-39]
45. ncoa2 ENSDARG00000017929 2520 1.458 - - - 0.723 - 0.735 - - - nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-010406-3]
46. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.457 - - - 0.713 - 0.744 - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
47. ndrg3a ENSDARG00000013087 5581 1.457 - - - - - 0.741 0.716 - - ndrg family member 3a [Source:ZFIN;Acc:ZDB-GENE-980526-124]
48. stx6 ENSDARG00000042742, ENSDARG00000115635 1208 1.449 - - - - - 0.701 0.748 - - syntaxin 6 [Source:ZFIN;Acc:ZDB-GENE-030131-858]
49. blzf1 ENSDARG00000011299 2568 1.445 - - - 0.701 - - 0.744 - - basic leucine zipper nuclear factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-1]
50. stat5.2 stat5.2 1187 1.432 - - - 0.702 - 0.730 - - -
51. cox16 ENSDARG00000039136 1066 1.431 - 0.702 - - - 0.729 - - - cytochrome c oxidase assembly factor COX16 [Source:ZFIN;Acc:ZDB-GENE-050417-60]
52. SACS_1 SACS_1 234 1.428 0.723 - - - - 0.705 - - -
53. KBTBD2 ENSDARG00000087226 707 1.428 - - - 0.709 - 0.719 - - - kelch repeat and BTB (POZ) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1262]
54. ssb ENSDARG00000029252 3394 1.425 0.708 0.717 - - - - - - - Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]
55. cuedc1b ENSDARG00000054748 1638 1.424 - 0.700 - - - 0.724 - - - CUE domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070424-29]
56. apopt1 ENSDARG00000092473 682 1.424 - - - 0.711 - 0.713 - - - apoptogenic 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-090313-66]
57. mntb ENSDARG00000073988 1023 1.417 - - - 0.708 - - 0.709 - - MAX network transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-070820-8]
58. snai1b ENSDARG00000046019 886 1.416 - 0.706 - - - 0.710 - - - snail family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-980526-514]
59. ccnc ENSDARG00000009607 1240 1.407 0.703 - - - - - 0.704 - - cyclin C [Source:ZFIN;Acc:ZDB-GENE-030131-7369]
60. slc9a5 ENSDARG00000078560 76 0.97 0.970 - - - - - - - - solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5 [Source:ZFIN;Acc:ZDB-GENE-080225-43]
61. nkx1.2la ENSDARG00000006350 76 0.97 0.970 - - - - - - - - NK1 transcription factor related 2-like,a [Source:ZFIN;Acc:ZDB-GENE-040615-1]
62. acd ENSDARG00000078055 98 0.969 0.969 - - - - - - - - ACD, shelterin complex subunit and telomerase recruitment factor [Source:ZFIN;Acc:ZDB-GENE-081022-45]
63. si:dkey-49m19.5 si:dkey-49m19.5 85 0.969 0.969 - - - - - - - -
64. SLC5A6 SLC5A6 179 0.968 0.968 - - - - - - - -
65. plekhf1 ENSDARG00000102435, ENSDARG00000110694 314 0.966 0.966 - - - - - - - - pleckstrin homology domain containing, family F (with FYVE domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1289]
66. rnf34b ENSDARG00000054036 121 0.965 0.965 - - - - - - - - ring finger protein 34b [Source:ZFIN;Acc:ZDB-GENE-071004-31]
67. TTBK2_1 TTBK2_1 649 0.965 0.965 - - - - - - - -
68. nxph2a ENSDARG00000063224 75 0.964 0.964 - - - - - - - - neurexophilin 2a [Source:ZFIN;Acc:ZDB-GENE-060503-124]
69. CR376723.1 CR376723.1 8 0.963 0.963 - - - - - - - -
70. CABZ01113374.2 CABZ01113374.2 27 0.963 0.963 - - - - - - - -
71. CU464087.2 CU464087.2 15 0.963 0.963 - - - - - - - -
72. btd ENSDARG00000099596 88 0.963 0.963 - - - - - - - - biotinidase [Source:ZFIN;Acc:ZDB-GENE-060825-186]
73. serpinb1l1 ENSDARG00000095830 14 0.963 0.963 - - - - - - - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-040715-5]
74. CABZ01012857.1 CABZ01012857.1 78 0.963 0.963 - - - - - - - -
75. mir184 48 0.963 0.963 - - - - - - - - microRNA 184
76. acta2 ENSDARG00000045180 96 0.963 0.963 - - - - - - - - actin, alpha 2, smooth muscle, aorta [Source:ZFIN;Acc:ZDB-GENE-030131-1229]
77. tbxas1 ENSDARG00000002249 55 0.963 0.963 - - - - - - - - thromboxane A synthase 1 (platelet) [Source:ZFIN;Acc:ZDB-GENE-030131-8805]
78. crfb12 ENSDARG00000052413 47 0.963 0.963 - - - - - - - - cytokine receptor family member B12 [Source:ZFIN;Acc:ZDB-GENE-060421-4184]
79. grin2da ENSDARG00000086207 28 0.963 0.963 - - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a [Source:ZFIN;Acc:ZDB-GENE-041008-124]
80. esr2a ENSDARG00000016454 23 0.963 0.963 - - - - - - - - estrogen receptor 2a [Source:ZFIN;Acc:ZDB-GENE-030116-2]
81. crygm3 ENSDARG00000078189, ENSDARG00000112851 6 0.963 0.963 - - - - - - - - crystallin, gamma M3 [Source:ZFIN;Acc:ZDB-GENE-050516-6]
82. THBS1_1 THBS1_1 6 0.963 0.963 - - - - - - - -
83. si:ch73-289h5.3 si:ch73-289h5.3 9 0.963 0.963 - - - - - - - -
84. ftr56 ENSDARG00000030954 23 0.963 0.963 - - - - - - - - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
85. fut9d ENSDARG00000028098 427 0.963 0.963 - - - - - - - - fucosyltransferase 9d [Source:ZFIN;Acc:ZDB-GENE-050309-15]
86. cart4 ENSDARG00000070142 55 0.963 0.963 - - - - - - - - cocaine- and amphetamine-regulated transcript 4 [Source:ZFIN;Acc:ZDB-GENE-060503-863]
87. BX000442.2 BX000442.2 8 0.963 0.963 - - - - - - - -
88. slc17a9a ENSDARG00000042954 36 0.962 0.962 - - - - - - - - solute carrier family 17 (vesicular nucleotide transporter), member 9a [Source:ZFIN;Acc:ZDB-GENE-081021-1]
89. zgc:172120 ENSDARG00000069199 278 0.962 0.962 - - - - - - - - zgc:172120 [Source:ZFIN;Acc:ZDB-GENE-080204-46]
90. si:dkey-78a14.4 ENSDARG00000036066 17 0.959 0.959 - - - - - - - - si:dkey-78a14.4 [Source:ZFIN;Acc:ZDB-GENE-110408-8]
91. CR352225.2 CR352225.2 1138 0.956 0.956 - - - - - - - -
92. adamts6 ENSDARG00000041982 320 0.956 0.956 - - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 6 [Source:ZFIN;Acc:ZDB-GENE-091113-9]
93. PLEKHG3 72 0.954 0.954 - - - - - - - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
94. CABZ01036951.1 CABZ01036951.1 71 0.951 0.951 - - - - - - - -
95. pidd pidd 86 0.95 0.950 - - - - - - - -
96. trmt44 ENSDARG00000033957 133 0.95 0.950 - - - - - - - - tRNA methyltransferase 44 homolog [Source:ZFIN;Acc:ZDB-GENE-041010-189]
97. zgc:163121 ENSDARG00000055370 110 0.949 0.949 - - - - - - - - zgc:163121 [Source:ZFIN;Acc:ZDB-GENE-070424-80]
98. fam160b2 ENSDARG00000060029, ENSDARG00000115630 221 0.949 0.949 - - - - - - - - family with sequence similarity 160, member B2 [Source:ZFIN;Acc:ZDB-GENE-061110-76]
99. FAM196A 82 0.943 0.943 - - - - - - - - family with sequence similarity 196 member A
100. si:ch211-241e1.5 ENSDARG00000008906 70 0.936 - - - - - 0.936 - - - si:ch211-241e1.5 [Source:ZFIN;Acc:ZDB-GENE-030131-6298]

There are 1714 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA