Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-220f16.1

Gene Name Gene ID Reads Annotation
si:ch211-220f16.1 ENSDARG00000093977 4 si:ch211-220f16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-198]










Genes with expression patterns similar to si:ch211-220f16.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-220f16.1 ENSDARG00000093977 4 5 1.000 - - 1.000 1.000 - - 1.000 1.000 si:ch211-220f16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-198]
2. ATG7 ENSDARG00000102893 1 2 1.000 - - - - - - - 1.000 ATG7 autophagy related 7 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1633]
3. gpat2 ENSDARG00000053575 12 2 - - - 1.000 - - - 1.000 - glycerol-3-phosphate acyltransferase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050309-118]
4. si:dkey-9c18.1 si:dkey-9c18.1 3 2 - - - - - - - 1.000 1.000
5. C6H22orf23 C6H22orf23 15 2 1.000 - - - - - - - 1.000
6. CR318653.1 ENSDARG00000104557 29 2 1.000 - - 1.000 - - - - -
7. f9a ENSDARG00000010097, ENSDARG00000113853 5 2 1.000 - - - - - - 1.000 - coagulation factor IXa [Source:ZFIN;Acc:ZDB-GENE-030714-2]
8. tsen54 ENSDARG00000036844 11 1.954 - - - - 0.954 - - 1.000 - TSEN54 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050522-454]
9. prg4a ENSDARG00000010482 10 1.911 - - - - 0.911 - - 1.000 - proteoglycan 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8295]
10. zp2.2 ENSDARG00000105346 23 1.903 - - - - 0.903 - - - 1.000 zona pellucida glycoprotein 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-010622-1]
11. si:dkey-42i9.8 ENSDARG00000071541 17 1.799 1.000 - - - 0.799 - - - - si:dkey-42i9.8 [Source:ZFIN;Acc:ZDB-GENE-050208-412]
12. si:ch211-191j22.8 ENSDARG00000057039 20 1.792 - - - 0.874 - - - - 0.918 si:ch211-191j22.8 [Source:ZFIN;Acc:ZDB-GENE-091204-10]
13. ifitm5 ENSDARG00000105153 132 1.76 1.000 - - 0.760 - - - - - interferon induced transmembrane protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-8970]
14. si:dkey-199m13.1 si:dkey-199m13.1 3 1.71 - - - - - - - 0.710 1.000
15. RNaseP_nuc_1 RNaseP_nuc_1 19 1.679 0.786 - - 0.893 - - - - -
16. nub1 ENSDARG00000061417 33 1.557 0.841 - - - - - - - 0.716 negative regulator of ubiquitin-like proteins 1 [Source:ZFIN;Acc:ZDB-GENE-080212-11]
17. bco2l ENSDARG00000027620 17 1.543 - - - 0.791 0.752 - - - - beta-carotene 15, 15-dioxygenase 2, like [Source:ZFIN;Acc:ZDB-GENE-010509-1]
18. nxpe3 ENSDARG00000061690 60 1.538 0.802 - - 0.736 - - - - - neurexophilin and PC-esterase domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-061013-214]
19. AL844186.1 ENSDARG00000114351 41 1.466 0.746 - - - 0.720 - - - -
20. taar13d ENSDARG00000110650 0 1 - - - - - - - - 1.000 trace amine associated receptor 13d [Source:ZFIN;Acc:ZDB-GENE-041014-62]
21. pigf ENSDARG00000032780 7 1 - - - - - - - - 1.000 phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
22. ccdc136b_1 ENSDARG00000057921, ENSDARG00000075513 3 1 - - - 1.000 - - - - - coiled-coil domain containing 136b [Source:ZFIN;Acc:ZDB-GENE-081104-244]
23. CR942805.1 CR942805.1 94 1 - - - - - - - - 1.000
24. CR388013.1 CR388013.1 3 1 - - - - - - - - 1.000
25. 5S_rRNA_27 5S_rRNA_27 2 1 - - - - - - - - 1.000
26. COL18A1 COL18A1 0 1 - - - - - - - - 1.000
27. si:ch211-284f7.1 si:ch211-284f7.1 1 1 - - - - - - - 1.000 -
28. si:dkey-69c1.1 ENSDARG00000093426 2 1 - - - 1.000 - - - - - si:dkey-69c1.1 [Source:ZFIN;Acc:ZDB-GENE-040724-48]
29. PFKL PFKL 9 1 1.000 - - - - - - - -
30. si:ch211-197k17.3 ENSDARG00000096214 2 1 - - - - - - - - 1.000 si:ch211-197k17.3 [Source:ZFIN;Acc:ZDB-GENE-110914-193]
31. si:dkey-46k9.3 si:dkey-46k9.3 1 1 - - - 1.000 - - - - -
32. l3mbtl3 ENSDARG00000025983 12 1 - - - - - - - - 1.000 l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
33. si:dkeyp-13d11.1 ENSDARG00000076343, ENSDARG00000096802 181 1 - - - 1.000 - - - - - si:dkeyp-13d11.1 [Source:ZFIN;Acc:ZDB-GENE-090313-377]
34. si:ch211-113a14.19_5 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 2 1 1.000 - - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
35. si:dkey-47k16.1 si:dkey-47k16.1 5 1 - - - - - - - - 1.000
36. NEK11 ENSDARG00000087564 40 1 - - - - - - - 1.000 - NIMA-related kinase 11 [Source:ZFIN;Acc:ZDB-GENE-100922-73]
37. HTRA2_11 HTRA2_11 2 1 - - - - - - - 1.000 -
38. fgf14 ENSDARG00000040982 5 1 - - - - - - - 1.000 - fibroblast growth factor 14 [Source:ZFIN;Acc:ZDB-GENE-060506-1]
39. CABZ01062083.1 CABZ01062083.1 40 1 1.000 - - - - - - - -
40. TMPRSS7 5 1 1.000 - - - - - - - - transmembrane protease, serine 7
41. slc5a9 ENSDARG00000005518 16 1 1.000 - - - - - - - - solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
42. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1 1.000 - - - - - - - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
43. si:dkeyp-100a1.5 si:dkeyp-100a1.5 8 1 1.000 - - - - - - - -
44. si:ch211-131e11.14 si:ch211-131e11.14 7 1 - - - - - - - - 1.000
45. BX005421.6 BX005421.6 4 1 1.000 - - - - - - - -
46. si:ch211-152c8.4 ENSDARG00000101110 6 1 - - - - 1.000 - - - - si:ch211-152c8.4 [Source:ZFIN;Acc:ZDB-GENE-091204-235]
47. exosc4 ENSDARG00000103432 21 1 1.000 - - - - - - - - exosome component 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1702]
48. PKHD1L1 ENSDARG00000091116 39 1 1.000 - - - - - - - - polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-475]
49. TRIM35_12 TRIM35_12 2 1 1.000 - - - - - - - -
50. KSR1_1 KSR1_1 1 1 - - - - - - - - 1.000
51. NUGGC NUGGC 9 1 - - - - - - - - 1.000
52. lhfpl4b ENSDARG00000076943 0 1 - - - - - - - - 1.000 LHFPL tetraspan subfamily member 4b [Source:ZFIN;Acc:ZDB-GENE-110216-4]
53. CABZ01021435.3 CABZ01021435.3 5 1 1.000 - - - - - - - -
54. ggt1l2.1 ENSDARG00000075055 0 1 - - - - - - - 1.000 - gamma-glutamyltransferase 1 like 2.1 [Source:ZFIN;Acc:ZDB-GENE-090312-32]
55. SNORA62_1 SNORA62_1 1 1 - - - - - - - - 1.000
56. cyp2p6 ENSDARG00000042978 46 1 1.000 - - - - - - - - cytochrome P450, family 2, subfamily P, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-790]
57. galr1 galr1 9 1 - - - - 1.000 - - - -
58. chgb ENSDARG00000076500 42 1 1.000 - - - - - - - - chromogranin B [Source:ZFIN;Acc:ZDB-GENE-070705-268]
59. vegfbb ENSDARG00000092480 1 1 - - - - - - - 1.000 - vascular endothelial growth factor Bb [Source:ZFIN;Acc:ZDB-GENE-091204-285]
60. ENSDARG00000088726 ENSDARG00000088726 0 1 - - - - - - - - 1.000
61. mif4gdb ENSDARG00000102578 31 1 - - - - - - - - 1.000 MIF4G domain containing b [Source:ZFIN;Acc:ZDB-GENE-050227-7]
62. BX927308.3 BX927308.3 126 1 1.000 - - - - - - - -
63. SNORA53 SNORA53 10 1 - - - - - - - - 1.000
64. BX927369.3 BX927369.3 5 1 - - - - 1.000 - - - -
65. RPS6KA2 ENSDARG00000028469 8 1 1.000 - - - - - - - - ribosomal protein S6 kinase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-090827-1]
66. msgn1 ENSDARG00000070546 188 1 1.000 - - - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
67. si:ch211-106h4.9 ENSDARG00000075706 36 1 1.000 - - - - - - - - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
68. ftr72 ENSDARG00000026704 1 1 - - - 1.000 - - - - - finTRIM family, member 72 [Source:ZFIN;Acc:ZDB-GENE-041114-86]
69. pde6c ENSDARG00000100397 49 1 1.000 - - - - - - - - phosphodiesterase 6C, cGMP-specific, cone, alpha prime [Source:ZFIN;Acc:ZDB-GENE-040426-1664]
70. BX004980.1 ENSDARG00000099680 10 1 - - - - - - - - 1.000
71. U3_7 U3_7 4 1 1.000 - - - - - - - -
72. zgc:86723 zgc:86723 299 1 1.000 - - - - - - - -
73. si:ch211-113a14.10 si:ch211-113a14.10 2 1 - - - - - - - - 1.000
74. ENSDARG00000086339 ENSDARG00000086339 1 1 - - - - - - - - 1.000
75. xrra1 ENSDARG00000089578 18 1 1.000 - - - - - - - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
76. CR759816.1 ENSDARG00000098977 27 1 1.000 - - - - - - - -
77. CU570684.5 CU570684.5 55 1 1.000 - - - - - - - -
78. BX323854.4 BX323854.4 3 1 - - - - 1.000 - - - -
79. si:dkey-88l16.3 ENSDARG00000094055 0 1 - - - - - - - - 1.000 si:dkey-88l16.3 [Source:ZFIN;Acc:ZDB-GENE-030131-6015]
80. BX324003.4 BX324003.4 24 1 - - - - - - - - 1.000
81. ENSDARG00000089062 ENSDARG00000089062 7 1 1.000 - - - - - - - -
82. zbtb32 ENSDARG00000073726 1 1 - - - - - - - - 1.000 zinc finger and BTB domain containing 32 [Source:ZFIN;Acc:ZDB-GENE-131121-166]
83. si:ch211-273j9.2 si:ch211-273j9.2 79 1 1.000 - - - - - - - -
84. BX005294.4 BX005294.4 8 1 1.000 - - - - - - - -
85. CU928217.1 CU928217.1 12 1 1.000 - - - - - - - -
86. or115-8 ENSDARG00000092406 1 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-10]
87. tmc4 ENSDARG00000031757 30 1 1.000 - - - - - - - - transmembrane channel-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7489]
88. CR391995.1 ENSDARG00000098041 48 1 1.000 - - - - - - - -
89. si:ch211-218o21.4 ENSDARG00000079869 4 1 1.000 - - - - - - - - si:ch211-218o21.4 [Source:ZFIN;Acc:ZDB-GENE-081104-178]
90. BX000442.2 BX000442.2 8 1 - - - - - - - - 1.000
91. CU928126.3 CU928126.3 18 1 - - - - - - - 1.000 -
92. kif13bb ENSDARG00000073859 7 1 - - - - 1.000 - - - - kinesin family member 13Bb [Source:ZFIN;Acc:ZDB-GENE-090908-5]
93. guca1c ENSDARG00000030758 9 1 1.000 - - - - - - - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
94. si:ch73-30l9.1 ENSDARG00000095891 42 1 1.000 - - - - - - - - si:ch73-30l9.1 [Source:ZFIN;Acc:ZDB-GENE-110411-132]
95. si:ch211-197e7.8 si:ch211-197e7.8 4 1 1.000 - - - - - - - -
96. gh1 ENSDARG00000038185 1 1 - - - - - - - - 1.000 growth hormone 1 [Source:ZFIN;Acc:ZDB-GENE-030725-2]
97. SP5 SP5 8 1 - - - - - - - - 1.000
98. AL929276.2 ENSDARG00000116984 2 1 - - - 1.000 - - - - -
99. si:dkey-246j7.1 ENSDARG00000095559 4 1 - - - - - - - 1.000 - si:dkey-246j7.1 [Source:ZFIN;Acc:ZDB-GENE-050419-230]
100. cabp4 ENSDARG00000008866 4 1 1.000 - - - - - - - - calcium binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-291]

There are 518 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA