Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-220f16.1

Gene Name Gene ID Reads Annotation
si:ch211-220f16.1 ENSDARG00000093977 4 si:ch211-220f16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-198]










Genes with expression patterns similar to si:ch211-220f16.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-220f16.1 ENSDARG00000093977 4 5 1.000 - - 1.000 1.000 - - 1.000 1.000 si:ch211-220f16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-198]
2. gpat2 ENSDARG00000053575 12 2 - - - 1.000 - - - 1.000 - glycerol-3-phosphate acyltransferase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050309-118]
3. ATG7 ENSDARG00000102893 1 2 1.000 - - - - - - - 1.000 ATG7 autophagy related 7 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1633]
4. CR318653.1 ENSDARG00000104557 29 2 1.000 - - 1.000 - - - - -
5. C6H22orf23 C6H22orf23 15 2 1.000 - - - - - - - 1.000
6. si:dkey-9c18.1 si:dkey-9c18.1 3 2 - - - - - - - 1.000 1.000
7. f9a ENSDARG00000010097, ENSDARG00000113853 5 2 1.000 - - - - - - 1.000 - coagulation factor IXa [Source:ZFIN;Acc:ZDB-GENE-030714-2]
8. tsen54 ENSDARG00000036844 11 1.954 - - - - 0.954 - - 1.000 - TSEN54 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050522-454]
9. prg4a ENSDARG00000010482 10 1.911 - - - - 0.911 - - 1.000 - proteoglycan 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8295]
10. zp2.2 ENSDARG00000105346 23 1.903 - - - - 0.903 - - - 1.000 zona pellucida glycoprotein 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-010622-1]
11. si:dkey-42i9.8 ENSDARG00000071541 17 1.799 1.000 - - - 0.799 - - - - si:dkey-42i9.8 [Source:ZFIN;Acc:ZDB-GENE-050208-412]
12. si:ch211-191j22.8 ENSDARG00000057039 20 1.792 - - - 0.874 - - - - 0.918 si:ch211-191j22.8 [Source:ZFIN;Acc:ZDB-GENE-091204-10]
13. ifitm5 ENSDARG00000105153 132 1.76 1.000 - - 0.760 - - - - - interferon induced transmembrane protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-8970]
14. si:dkey-199m13.1 si:dkey-199m13.1 3 1.71 - - - - - - - 0.710 1.000
15. RNaseP_nuc_1 RNaseP_nuc_1 19 1.679 0.786 - - 0.893 - - - - -
16. nub1 ENSDARG00000061417 33 1.557 0.841 - - - - - - - 0.716 negative regulator of ubiquitin-like proteins 1 [Source:ZFIN;Acc:ZDB-GENE-080212-11]
17. bco2l ENSDARG00000027620 17 1.543 - - - 0.791 0.752 - - - - beta-carotene 15, 15-dioxygenase 2, like [Source:ZFIN;Acc:ZDB-GENE-010509-1]
18. nxpe3 ENSDARG00000061690 60 1.538 0.802 - - 0.736 - - - - - neurexophilin and PC-esterase domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-061013-214]
19. AL844186.1 ENSDARG00000114351 41 1.466 0.746 - - - 0.720 - - - -
20. alg13 ENSDARG00000054374 2 1 - - - - - - - 1.000 - ALG13, UDP-N-acetylglucosaminyltransferase subunit [Source:ZFIN;Acc:ZDB-GENE-060307-1]
21. galr1 galr1 9 1 - - - - 1.000 - - - -
22. SNORD46 SNORD46 0 1 - - - - - - - - 1.000
23. U3_7 U3_7 4 1 1.000 - - - - - - - -
24. si:ch211-227e10.2 ENSDARG00000100414 1 1 - - - - - - - - 1.000 si:ch211-227e10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-8]
25. CABZ01118769.1 CABZ01118769.1 9 1 - - - - - - - 1.000 -
26. ciita ENSDARG00000090851 5 1 - - - 1.000 - - - - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
27. CU638740.4 CU638740.4 1 1 - - - - - - - - 1.000
28. bsx ENSDARG00000068976, ENSDARG00000110782 139 1 1.000 - - - - - - - - brain-specific homeobox [Source:ZFIN;Acc:ZDB-GENE-040628-4]
29. KSR1_1 KSR1_1 1 1 - - - - - - - - 1.000
30. si:ch211-218o21.4 ENSDARG00000079869 4 1 1.000 - - - - - - - - si:ch211-218o21.4 [Source:ZFIN;Acc:ZDB-GENE-081104-178]
31. si:dkey-222o15.3 si:dkey-222o15.3 3 1 - - - - - - - - 1.000
32. CD97_2 CD97_2 15 1 - - - 1.000 - - - - -
33. si:ch211-120k19.3 si:ch211-120k19.3 5 1 - - - 1.000 - - - - -
34. NUDT13 ENSDARG00000057417, ENSDARG00000115835 5 1 - - - - - - - - 1.000 nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
35. LPHN2_1 LPHN2_1 3 1 - - - - - - - - 1.000
36. U8 U8 11 1 1.000 - - - - - - - -
37. g6pcb ENSDARG00000014967 8 1 1.000 - - - - - - - - glucose-6-phosphatase b, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081223-2]
38. SNORA62_1 SNORA62_1 1 1 - - - - - - - - 1.000
39. lhfpl4b ENSDARG00000076943 0 1 - - - - - - - - 1.000 LHFPL tetraspan subfamily member 4b [Source:ZFIN;Acc:ZDB-GENE-110216-4]
40. wu:fb64b08 wu:fb64b08 8 1 1.000 - - - - - - - -
41. ldlrad4 ldlrad4 0 1 - - - - - - - - 1.000
42. si:ch211-169j7.3 si:ch211-169j7.3 4 1 - - - - - - - - 1.000
43. mipa ENSDARG00000037285, ENSDARG00000116133 507 1 1.000 - - - - - - - - major intrinsic protein of lens fiber a [Source:ZFIN;Acc:ZDB-GENE-040801-41]
44. C14H11orf80 C14H11orf80 1 1 - - - - - - - - 1.000
45. FP102801.1 FP102801.1 294 1 1.000 - - - - - - - -
46. si:dkey-20j1.5 si:dkey-20j1.5 1 1 - - - - - - - 1.000 -
47. 5S_rRNA_27 5S_rRNA_27 2 1 - - - - - - - - 1.000
48. si:dkeyp-79c2.1 42 1 1.000 - - - - - - - - si:dkeyp-79c2.1, transcript variant X2
49. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1 - - - - - - - - 1.000 POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
50. aqp10b ENSDARG00000058678 1 1 - - - - - - - 1.000 - aquaporin 10b [Source:ZFIN;Acc:ZDB-GENE-060503-57]
51. ENSDARG00000086339 ENSDARG00000086339 1 1 - - - - - - - - 1.000
52. CT573253.1 CT573253.1 4 1 1.000 - - - - - - - -
53. BX323793.1 ENSDARG00000104134 24 1 1.000 - - - - - - - - 1-phosphatidylinositol phosphodiesterase-like [Source:NCBI gene;Acc:100331378]
54. CAMKV CAMKV 11 1 1.000 - - - - - - - -
55. BX324142.2 ENSDARG00000117006 1 1 - - - - - - - - 1.000
56. cd74a ENSDARG00000009087 20 1 1.000 - - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
57. sorcs3b ENSDARG00000077349 72 1 1.000 - - - - - - - - sortilin related VPS10 domain containing receptor 3b [Source:ZFIN;Acc:ZDB-GENE-131121-455]
58. si:dkey-254e13.6 ENSDARG00000088301 191 1 1.000 - - - - - - - - si:dkey-254e13.6 [Source:ZFIN;Acc:ZDB-GENE-070705-420]
59. adam10b ENSDARG00000015502 26 1 - - - - - - - 1.000 - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
60. PKHD1L1 ENSDARG00000091116 39 1 1.000 - - - - - - - - polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-475]
61. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1 1.000 - - - - - - - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
62. lcp1 ENSDARG00000023188 298 1 1.000 - - - - - - - - lymphocyte cytosolic protein 1 (L-plastin) [Source:ZFIN;Acc:ZDB-GENE-991213-5]
63. si:ch211-284f7.1 si:ch211-284f7.1 1 1 - - - - - - - 1.000 -
64. CR388013.1 CR388013.1 3 1 - - - - - - - - 1.000
65. plp1b ENSDARG00000011929 8 1 - - - - - - - - 1.000 proteolipid protein 1b [Source:ZFIN;Acc:ZDB-GENE-030710-6]
66. CABZ01057633.1 CABZ01057633.1 39 1 1.000 - - - - - - - -
67. si:dkeyp-27e10.7 si:dkeyp-27e10.7 5 1 - - - - - - - 1.000 -
68. si:ch211-106h4.9 ENSDARG00000075706 36 1 1.000 - - - - - - - - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
69. syne2a_1 0 1 - - - - - - - - 1.000 spectrin repeat containing, nuclear envelope 2a
70. si:ch211-196c10.8 si:ch211-196c10.8 19 1 - - - - - - - 1.000 -
71. si:ch211-273j9.2 si:ch211-273j9.2 79 1 1.000 - - - - - - - -
72. FBXO10 ENSDARG00000061936, ENSDARG00000116317 3 1 - - - - - - - 1.000 - F-box protein 10 [Source:ZFIN;Acc:ZDB-GENE-090313-270]
73. ggt1l2.1 ENSDARG00000075055 0 1 - - - - - - - 1.000 - gamma-glutamyltransferase 1 like 2.1 [Source:ZFIN;Acc:ZDB-GENE-090312-32]
74. BX927122.1 ENSDARG00000100571 0 1 - - - - - - - - 1.000
75. si:dkey-265e15.2 ENSDARG00000089582, ENSDARG00000113391 1 1 - - - - - - - - 1.000 si:dkey-265e15.2 [Source:ZFIN;Acc:ZDB-GENE-081103-3]
76. vetz 12 1 - - - - - - - - 1.000 vezatin, adherens junctions transmembrane protein, transcript variant X2
77. CR936408.1 ENSDARG00000078938 15 1 - - - - - - - - 1.000 uncharacterized LOC799523 [Source:NCBI gene;Acc:799523]
78. CR759816.1 ENSDARG00000098977 27 1 1.000 - - - - - - - -
79. rtdr1 rtdr1 158 1 1.000 - - - - - - - -
80. cyp2p9 ENSDARG00000022631 1 1 - - - 1.000 - - - - - cytochrome P450, family 2, subfamily P, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-040120-2]
81. si:dkey-69c19.1 si:dkey-69c19.1 37 1 1.000 - - - - - - - -
82. hel_dr4 hel_dr4 12 1 - - - - - - - - 1.000
83. si:ch211-237c9.3 si:ch211-237c9.3 17 1 - - - 1.000 - - - - -
84. trim35-29 ENSDARG00000055730 24 1 1.000 - - - - - - - - tripartite motif containing 35-29 [Source:ZFIN;Acc:ZDB-GENE-041114-35]
85. zgc:172051 ENSDARG00000086569 12 1 - - - - - - - - 1.000 zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
86. cyp2p6 ENSDARG00000042978 46 1 1.000 - - - - - - - - cytochrome P450, family 2, subfamily P, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-790]
87. BX005294.4 BX005294.4 8 1 1.000 - - - - - - - -
88. gpr124 gpr124 25 1 1.000 - - - - - - - -
89. isl1l ENSDARG00000021055, ENSDARG00000110204 4 1 - - - 1.000 - - - - - islet1, like [Source:ZFIN;Acc:ZDB-GENE-040624-1]
90. zgc:158340 zgc:158340 21 1 - - - - - - - 1.000 -
91. pou2f2b pou2f2b 134 1 1.000 - - - - - - - -
92. si:dkeyp-100a1.5 si:dkeyp-100a1.5 8 1 1.000 - - - - - - - -
93. PROC PROC 11 1 1.000 - - - - - - - -
94. GTF3A GTF3A 6 1 1.000 - - - - - - - -
95. EGFR_1 EGFR_1 2 1 - - - - - - - 1.000 -
96. PACRG ENSDARG00000087556 7 1 - - - - 1.000 - - - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
97. CU928217.1 CU928217.1 12 1 1.000 - - - - - - - -
98. SNORA53 SNORA53 10 1 - - - - - - - - 1.000
99. CR848032.2 CR848032.2 0 1 - - - - - - - - 1.000
100. si:ch211-196c10.13 ENSDARG00000096756 28 1 - - - - - - - - 1.000 si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]

There are 518 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA