Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-218c6.8

Gene Name Gene ID Reads Annotation
si:ch211-218c6.8 ENSDARG00000092364 1270 si:ch211-218c6.8 [Source:ZFIN;Acc:ZDB-GENE-050419-103]










Genes with expression patterns similar to si:ch211-218c6.8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-218c6.8 ENSDARG00000092364 1270 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-218c6.8 [Source:ZFIN;Acc:ZDB-GENE-050419-103]
2. lbr ENSDARG00000014013 4835 2.365 0.716 - - - - 0.711 - 0.938 - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
3. USO1 ENSDARG00000019581 1617 1.937 0.956 0.981 - - - - - - - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
4. ncapd2 ENSDARG00000005058 2819 1.908 - 0.982 - - - - - 0.926 - non-SMC condensin I complex, subunit D2 [Source:ZFIN;Acc:ZDB-GENE-050506-59]
5. FP102272.1 FP102272.1 9473 1.904 0.963 0.941 - - - - - - -
6. rerea ENSDARG00000077353 4162 1.879 0.887 0.992 - - - - - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
7. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 1.877 0.881 0.996 - - - - - - - vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
8. esrp1 ENSDARG00000011245 2097 1.87 - 0.983 - - - - - 0.887 - epithelial splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1732]
9. etfa ENSDARG00000101631 2946 1.861 0.903 0.958 - - - - - - - electron transfer flavoprotein subunit alpha [Source:ZFIN;Acc:ZDB-GENE-030131-4449]
10. pi4kaa ENSDARG00000076724 1949 1.861 0.894 0.967 - - - - - - - phosphatidylinositol 4-kinase, catalytic, alpha a [Source:ZFIN;Acc:ZDB-GENE-100204-2]
11. suz12a ENSDARG00000070256 2229 1.851 0.929 - - - - - - 0.922 - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
12. prrx1b ENSDARG00000042027 1128 1.849 - 0.995 - - - 0.854 - - - paired related homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9033]
13. kazald3 ENSDARG00000053509 513 1.847 0.921 - - - - - - 0.926 - Kazal-type serine peptidase inhibitor domain 3 [Source:ZFIN;Acc:ZDB-GENE-050208-155]
14. SH3D21 ENSDARG00000099448 1726 1.841 0.856 0.985 - - - - - - - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
15. atp2a3 ENSDARG00000060978 1408 1.84 0.920 - - - - - - 0.920 - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
16. ZBTB16 ZBTB16 3385 1.804 0.931 - - - - - - 0.873 -
17. klf11a ENSDARG00000030844 3972 1.801 - 0.922 - - - - - 0.879 - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
18. psma6a ENSDARG00000019398 2702 1.79 0.806 0.984 - - - - - - - proteasome subunit alpha 6a [Source:ZFIN;Acc:ZDB-GENE-020326-1]
19. icmt ENSDARG00000020241, ENSDARG00000110063 598 1.772 - - - - - - 0.838 0.934 - isoprenylcysteine carboxyl methyltransferase [Source:ZFIN;Acc:ZDB-GENE-050417-90]
20. znhit1 ENSDARG00000054574 979 1.761 - 0.988 - - - - 0.773 - - zinc finger, HIT-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-272]
21. sf3b2 ENSDARG00000018049 4675 1.742 - 0.824 - - - - - 0.918 - splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
22. syncripl ENSDARG00000026723 3889 1.728 0.873 - - - - - - 0.855 - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
23. fam89a ENSDARG00000079979 4375 1.726 0.914 - - - - - 0.812 - - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
24. TSSC4 ENSDARG00000036144 1994 1.714 0.897 - - - - - 0.817 - - tumor suppressing subtransferable candidate 4 [Source:ZFIN;Acc:ZDB-GENE-060825-263]
25. wdfy4 ENSDARG00000077009 802 1.712 0.785 - - - - - - 0.927 - WDFY family member 4 [Source:ZFIN;Acc:ZDB-GENE-090313-322]
26. rap2c ENSDARG00000015649 4709 1.699 - 0.923 - - - 0.776 - - - RAP2C, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041024-1]
27. irf6 ENSDARG00000101986 1438 1.696 0.778 - - - - - - 0.918 - interferon regulatory factor 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1137]
28. slc35f6 ENSDARG00000016745, ENSDARG00000114790 3823 1.69 0.768 - - - - - - 0.922 - solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]
29. map3k7 ENSDARG00000020469 2845 1.69 0.943 - - - - - 0.747 - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
30. terfa ENSDARG00000039302 779 1.69 0.901 - - - - 0.789 - - - telomeric repeat binding factor a [Source:ZFIN;Acc:ZDB-GENE-020419-38]
31. strn3 ENSDARG00000001729 4608 1.684 - 0.971 - - - - 0.713 - - striatin, calmodulin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-405]
32. tmem59 ENSDARG00000019033 2692 1.682 - 0.976 - - - 0.706 - - - transmembrane protein 59 [Source:ZFIN;Acc:ZDB-GENE-070912-397]
33. tmem176l.4 ENSDARG00000074390 1886 1.671 - 0.931 - - - 0.740 - - - transmembrane protein 176l.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3532]
34. tax1bp3 ENSDARG00000059177 4324 1.67 0.951 - - - - 0.719 - - - Tax1 (human T-cell leukemia virus type I) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2830]
35. nop10 ENSDARG00000104227 2463 1.667 0.739 - - - - - - 0.928 - NOP10 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041007-4]
36. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 1.662 0.954 - - - - - 0.708 - - nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
37. rtf1 ENSDARG00000008947 6596 1.658 - 0.940 - - - - - 0.718 - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
38. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 1.648 0.705 0.943 - - - - - - - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
39. ccne2 ENSDARG00000098529 4695 1.644 0.928 - - - - - 0.716 - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
40. leo1 ENSDARG00000055357 1644 1.635 0.844 - - - - - 0.791 - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
41. zc3h7b 2936 1.634 - - - - - - 0.755 0.879 - zinc finger CCCH-type containing 7B
42. aup1 ENSDARG00000092609 2431 1.612 0.908 - - - - - 0.704 - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
43. capn12 ENSDARG00000010758, ENSDARG00000116381 3116 1.609 0.807 - - - - 0.802 - - - calpain 12 [Source:ZFIN;Acc:ZDB-GENE-050419-245]
44. hat1 ENSDARG00000034916 5712 1.595 0.739 - - - - - - 0.856 - histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
45. dlx2a ENSDARG00000079964 1253 1.586 - - - - - 0.796 - 0.790 - distal-less homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-212]
46. fam162a ENSDARG00000063344 1812 1.585 0.861 - - - - - 0.724 - - family with sequence similarity 162, member A [Source:ZFIN;Acc:ZDB-GENE-030131-8307]
47. lman1 ENSDARG00000069980 2550 1.581 0.802 - - - - - 0.779 - - lectin, mannose-binding, 1 [Source:ZFIN;Acc:ZDB-GENE-060201-4]
48. helz ENSDARG00000030560 3259 1.576 - - - - - - 0.737 0.839 - helicase with zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-2419]
49. tmem50a ENSDARG00000015757 3244 1.567 - - - - - - 0.712 0.855 - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
50. TNPO2 ENSDARG00000042887 2290 1.558 - - - - - 0.719 - 0.839 - transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
51. st13 ENSDARG00000021973 7787 1.55 - - - - - - 0.715 0.835 - ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
52. sept9a ENSDARG00000020235 6881 1.538 - - - - - 0.770 - 0.768 - septin 9a [Source:ZFIN;Acc:ZDB-GENE-030131-9187]
53. si:ch211-69g19.2 ENSDARG00000070656, ENSDARG00000110191, ENSDARG00000114528 2860 1.531 - - - - - - 0.701 0.830 - si:ch211-69g19.2 [Source:ZFIN;Acc:ZDB-GENE-030804-13]
54. CPAMD8 ENSDARG00000056530 3481 1.514 0.763 - - - - 0.751 - - - C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
55. nckap1 ENSDARG00000060853 3540 1.513 - 0.789 - - - - 0.724 - - NCK-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4426]
56. mcfd2 ENSDARG00000039757, ENSDARG00000109631, ENSDARG00000116502 1804 1.487 0.736 - - - - 0.751 - - - multiple coagulation factor deficiency 2 [Source:ZFIN;Acc:ZDB-GENE-041010-8]
57. FRMD4A ENSDARG00000042249 2883 1.473 - - - - - 0.723 0.750 - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
58. r3hdm1 ENSDARG00000101458 5241 1.428 - - - - - - 0.716 0.712 - R3H domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7119]
59. pcyt1bb ENSDARG00000104207 1204 1.419 0.719 - - - - 0.700 - - - phosphate cytidylyltransferase 1, choline, beta b [Source:ZFIN;Acc:ZDB-GENE-051120-48]
60. prr12a ENSDARG00000074229 1668 0.998 - 0.998 - - - - - - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
61. acadsb ENSDARG00000076780 2382 0.998 - 0.998 - - - - - - - acyl-CoA dehydrogenase short/branched chain [Source:ZFIN;Acc:ZDB-GENE-070410-109]
62. stxbp5b ENSDARG00000029234 760 0.998 - 0.998 - - - - - - - syntaxin binding protein 5b (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-090821-5]
63. ptpn9a ENSDARG00000077495 2295 0.998 - 0.998 - - - - - - - protein tyrosine phosphatase, non-receptor type 9, a [Source:ZFIN;Acc:ZDB-GENE-101027-1]
64. tox4 tox4 1671 0.998 - 0.998 - - - - - - -
65. pfkfb3 ENSDARG00000001953 656 0.998 - 0.998 - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2724]
66. polr1e ENSDARG00000006434, ENSDARG00000113920 770 0.997 - 0.997 - - - - - - - RNA polymerase I subunit E [Source:ZFIN;Acc:ZDB-GENE-050522-251]
67. ubn2 ubn2 534 0.997 - 0.997 - - - - - - -
68. C25H1orf51 C25H1orf51 2460 0.997 - 0.997 - - - - - - -
69. DUSP28 ENSDARG00000059695 1135 0.997 - 0.997 - - - - - - - dual specificity phosphatase 28 [Source:ZFIN;Acc:ZDB-GENE-131127-257]
70. chpfa ENSDARG00000078392 1427 0.997 - 0.997 - - - - - - - chondroitin polymerizing factor a [Source:ZFIN;Acc:ZDB-GENE-100504-2]
71. AL929204.1 AL929204.1 773 0.997 - 0.997 - - - - - - -
72. sept8b ENSDARG00000014233 223 0.997 - 0.997 - - - - - - - septin 8b [Source:ZFIN;Acc:ZDB-GENE-070424-3]
73. lta4h ENSDARG00000006029, ENSDARG00000112240 3146 0.997 - 0.997 - - - - - - - leukotriene A4 hydrolase [Source:ZFIN;Acc:ZDB-GENE-040426-2477]
74. ube2e2 ENSDARG00000034670 5918 0.997 - 0.997 - - - - - - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
75. csrnp2 ENSDARG00000075972 1650 0.997 - 0.997 - - - - - - - cysteine-serine-rich nuclear protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-137]
76. zgc:123295 ENSDARG00000056324 361 0.997 - 0.997 - - - - - - - zgc:123295 [Source:ZFIN;Acc:ZDB-GENE-051127-11]
77. pip4k2aa ENSDARG00000003776 865 0.997 - 0.997 - - - - - - - phosphatidylinositol-5-phosphate 4-kinase, type II, alpha a [Source:ZFIN;Acc:ZDB-GENE-080721-18]
78. wipf1 wipf1 760 0.997 - 0.997 - - - - - - -
79. arid1ab ENSDARG00000101891 1722 0.997 - 0.997 - - - - - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
80. ivd ENSDARG00000042853, ENSDARG00000112920 1526 0.996 - 0.996 - - - - - - - isovaleryl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030616-262]
81. mxra7 ENSDARG00000095300 332 0.996 - 0.996 - - - - - - - matrix-remodelling associated 7 [Source:ZFIN;Acc:ZDB-GENE-041014-95]
82. dhrs9 ENSDARG00000019260 250 0.996 - 0.996 - - - - - - - dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
83. ptk6a ENSDARG00000017947 682 0.996 - 0.996 - - - - - - - PTK6 protein tyrosine kinase 6a [Source:ZFIN;Acc:ZDB-GENE-081105-117]
84. larp1 ENSDARG00000101722 976 0.996 - 0.996 - - - - - - - La ribonucleoprotein domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5386]
85. scn3b ENSDARG00000062359 242 0.996 - 0.996 - - - - - - - sodium channel, voltage-gated, type III, beta [Source:ZFIN;Acc:ZDB-GENE-070920-2]
86. mis18a ENSDARG00000035333 555 0.996 - 0.996 - - - - - - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
87. SETDB2 ENSDARG00000101462 249 0.996 - 0.996 - - - - - - - SET domain, bifurcated 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7093]
88. igsf9a ENSDARG00000075864 1870 0.996 - 0.996 - - - - - - - immunoglobulin superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060503-288]
89. THSD1 ENSDARG00000075273, ENSDARG00000112294 228 0.996 - 0.996 - - - - - - - thrombospondin, type I, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100105-3]
90. zgc:136870 ENSDARG00000054837, ENSDARG00000109282 201 0.996 - 0.996 - - - - - - - zgc:136870 [Source:ZFIN;Acc:ZDB-GENE-060312-1]
91. RCSD1 RCSD1 144 0.996 - 0.996 - - - - - - -
92. nol11 ENSDARG00000026767 2528 0.996 - 0.996 - - - - - - - nucleolar protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-419]
93. KLF8 ENSDARG00000060661 219 0.996 - 0.996 - - - - - - - Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
94. si:dkey-11e23.9 ENSDARG00000095586 114 0.996 - 0.996 - - - - - - - si:dkey-11e23.9 [Source:ZFIN;Acc:ZDB-GENE-041014-301]
95. ppp1r14ba ENSDARG00000044541 792 0.996 - 0.996 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ba [Source:ZFIN;Acc:ZDB-GENE-060825-331]
96. tpi1a ENSDARG00000025012 562 0.996 - 0.996 - - - - - - - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
97. appl1 1019 0.996 - 0.996 - - - - - - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, transcript variant X1
98. meis4.1a meis4.1a 1165 0.995 - 0.995 - - - - - - -
99. slc31a2 ENSDARG00000076092 251 0.995 - 0.995 - - - - - - - solute carrier family 31 (copper transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030925-25]
100. setd7 ENSDARG00000038858 1072 0.995 - 0.995 - - - - - - - SET domain containing (lysine methyltransferase) 7 [Source:ZFIN;Acc:ZDB-GENE-040718-156]

There are 1083 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA