Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-216l23.2

Gene Name Gene ID Reads Annotation
si:ch211-216l23.2 ENSDARG00000069122, ENSDARG00000115838 1365 si:ch211-216l23.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3806]










Genes with expression patterns similar to si:ch211-216l23.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-216l23.2 ENSDARG00000069122, ENSDARG00000115838 1365 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-216l23.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3806]
2. rab35 rab35 1287 1.823 - - 0.998 - - - - 0.825 -
3. trps1 ENSDARG00000104082 918 1.819 - - 0.999 - - - 0.820 - - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]
4. si:ch211-266d19.4 ENSDARG00000012642 1251 1.806 - - 0.998 - - - - 0.808 - si:ch211-266d19.4 [Source:ZFIN;Acc:ZDB-GENE-091204-74]
5. clybl ENSDARG00000029729 690 1.772 - 0.834 - - - - - 0.938 - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
6. hmbox1a ENSDARG00000027082 2569 1.73 - - 0.997 - - 0.733 - - - homeobox containing 1a [Source:ZFIN;Acc:ZDB-GENE-050913-89]
7. arl15b ENSDARG00000057995, ENSDARG00000109775 1243 1.714 - 0.715 0.999 - - - - - - ADP-ribosylation factor-like 15b [Source:ZFIN;Acc:ZDB-GENE-080813-2]
8. BX511021.1 ENSDARG00000073936 647 1.712 - 0.761 - - - - - 0.951 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
9. POLQ ENSDARG00000044622, ENSDARG00000110374 94 1.712 - 0.750 - - - - - 0.962 - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
10. aup1 ENSDARG00000092609 2431 1.709 - - 0.998 - - - - 0.711 - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
11. slc6a6a ENSDARG00000012534 183 1.674 0.719 - - - - - - 0.955 - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
12. si:dkey-114c15.7 237 1.654 - - - - - 0.729 - 0.925 - si:dkey-114c15.7
13. umps ENSDARG00000012215 4564 1.64 - - 0.898 - - - - 0.742 - uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
14. wu:fj13e08 1223 1.636 - 0.886 - - - - 0.750 - - wu:fj13e08
15. si:dkey-14k9.3 ENSDARG00000045595 256 1.634 - 0.739 - - - - - 0.895 - si:dkey-14k9.3 [Source:ZFIN;Acc:ZDB-GENE-030131-2893]
16. C18H11orf58 C18H11orf58 1293 1.632 - - - - - - 0.728 0.904 -
17. RABEPK ENSDARG00000112165 112 1.592 - 0.875 - - - - 0.717 - - Rab9 effector protein with kelch motifs [Source:ZFIN;Acc:ZDB-GENE-040704-52]
18. rchy1 ENSDARG00000016710, ENSDARG00000109668, ENSDARG00000115626 477 1.584 - 0.770 - - - - - 0.814 - ring finger and CHY zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-73]
19. ipo7 ENSDARG00000035751 7095 1.559 - - - - - 0.820 0.739 - - importin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-458]
20. homez homez 1875 1.558 - - - - - 0.751 0.807 - -
21. CU571162.1 CU571162.1 652 1.551 0.826 - - - - - 0.725 - -
22. PCSK6 ENSDARG00000104574 710 1.531 - - - - - - 0.771 0.760 - proprotein convertase subtilisin/kexin type 6 [Source:ZFIN;Acc:ZDB-GENE-100908-1]
23. isg20l2 ENSDARG00000102266 167 1.526 - 0.755 - - - - 0.771 - - interferon stimulated exonuclease gene 20-like 2 [Source:ZFIN;Acc:ZDB-GENE-070928-8]
24. SEMA5B SEMA5B 1316 1.523 0.713 - - - - - - 0.810 -
25. syncripl ENSDARG00000026723 3889 1.515 - - - - - 0.794 0.721 - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
26. bap1 ENSDARG00000063051 4973 1.514 - - - - - 0.715 0.799 - - BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase) [Source:ZFIN;Acc:ZDB-GENE-050208-492]
27. plxnb3 ENSDARG00000032990 98 1.514 - 0.780 - - - - 0.734 - - plexin B3 [Source:ZFIN;Acc:ZDB-GENE-081104-53]
28. rnf44 ENSDARG00000068582 1612 1.508 - - - - - 0.731 - 0.777 - ring finger protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-604]
29. CDCA7L CDCA7L 1365 1.508 - - - - - - 0.722 0.786 -
30. SLC41A2 SLC41A2 202 1.484 - - - - - - 0.706 0.778 -
31. mrgbp ENSDARG00000028894, ENSDARG00000110790 1316 1.484 - 0.726 - - - 0.758 - - - MRG/MORF4L binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1698]
32. meis3 ENSDARG00000002795 2509 1.478 - - - - - 0.718 0.760 - - myeloid ecotropic viral integration site 3 [Source:ZFIN;Acc:ZDB-GENE-010406-2]
33. vps13d ENSDARG00000017986 183 1.459 - 0.750 - - - - 0.709 - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
34. tbl3 ENSDARG00000052344 1530 1.458 - - - - - 0.737 0.721 - - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
35. dchs1b ENSDARG00000079850 831 1.454 - 0.712 - - - - 0.742 - - dachsous cadherin-related 1b [Source:ZFIN;Acc:ZDB-GENE-050208-41]
36. usf2 ENSDARG00000020228 2667 1.451 - - - - - - - 0.750 0.701 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
37. pgam1b ENSDARG00000014068 1830 1.449 - - - - - - 0.741 - 0.708 phosphoglycerate mutase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5376]
38. wrap53 ENSDARG00000086150 975 1.416 - 0.713 - - - - 0.703 - - WD repeat containing, antisense to TP53 [Source:ZFIN;Acc:ZDB-GENE-030131-515]
39. slc4a2b ENSDARG00000052330 1900 0.999 - - 0.999 - - - - - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
40. acss2 ENSDARG00000037781, ENSDARG00000112371 3100 0.999 - - 0.999 - - - - - - acyl-CoA synthetase short chain family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-388]
41. FUZ ENSDARG00000079730 821 0.999 - - 0.999 - - - - - - fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
42. suz12a ENSDARG00000070256 2229 0.999 - - 0.999 - - - - - - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
43. METTL18 ENSDARG00000074588 918 0.999 - - 0.999 - - - - - - methyltransferase like 18 [Source:HGNC Symbol;Acc:HGNC:28793]
44. egr2a ENSDARG00000044098 1101 0.999 - - 0.999 - - - - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
45. wnt7bb ENSDARG00000071107 1158 0.999 - - 0.999 - - - - - - wingless-type MMTV integration site family, member 7Bb [Source:ZFIN;Acc:ZDB-GENE-081006-1]
46. pde12 ENSDARG00000030964 615 0.999 - - 0.999 - - - - - - phosphodiesterase 12 [Source:ZFIN;Acc:ZDB-GENE-060519-25]
47. map3k3 ENSDARG00000060348 1482 0.999 - - 0.999 - - - - - - mitogen-activated protein kinase kinase kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070910-1]
48. taok2b_1 ENSDARG00000100620 2082 0.999 - - 0.999 - - - - - - TAO kinase 2b [Source:ZFIN;Acc:ZDB-GENE-110603-3]
49. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 0.999 - - 0.999 - - - - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
50. tbccd1 ENSDARG00000056886, ENSDARG00000114427 1389 0.999 - - 0.999 - - - - - - TBCC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-222]
51. zdhhc6 ENSDARG00000075721 1494 0.999 - - 0.999 - - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
52. GSG2 GSG2 1162 0.999 - - 0.999 - - - - - -
53. dnajc2 ENSDARG00000070477 902 0.999 - - 0.999 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1912]
54. C5H2orf68 C5H2orf68 849 0.999 - - 0.999 - - - - - -
55. hyi ENSDARG00000030166 1199 0.999 - - 0.999 - - - - - - hydroxypyruvate isomerase [Source:ZFIN;Acc:ZDB-GENE-040426-1273]
56. pgam5 ENSDARG00000035608 4044 0.999 - - 0.999 - - - - - - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
57. rad54l ENSDARG00000018623 837 0.999 - - 0.999 - - - - - - RAD54 like [Source:ZFIN;Acc:ZDB-GENE-040426-968]
58. lmx1bb ENSDARG00000068365 627 0.999 - - 0.999 - - - - - - LIM homeobox transcription factor 1, beta b [Source:ZFIN;Acc:ZDB-GENE-050114-2]
59. lipg ENSDARG00000031044 1516 0.999 - - 0.999 - - - - - - lipase, endothelial [Source:ZFIN;Acc:ZDB-GENE-040426-699]
60. PRIMPOL ENSDARG00000033273, ENSDARG00000111555 918 0.999 - - 0.999 - - - - - - primase and polymerase (DNA-directed) [Source:ZFIN;Acc:ZDB-GENE-051113-100]
61. poc5 ENSDARG00000059982 569 0.999 - - 0.999 - - - - - - POC5 centriolar protein homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-060526-135]
62. rnmt ENSDARG00000070553 1743 0.999 - - 0.999 - - - - - - RNA (guanine-7-) methyltransferase [Source:ZFIN;Acc:ZDB-GENE-041008-25]
63. PYURF ENSDARG00000045773 4576 0.998 - - 0.998 - - - - - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
64. cops5 ENSDARG00000057624 1485 0.998 - - 0.998 - - - - - - COP9 signalosome subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1686]
65. abca3b ENSDARG00000100524 2416 0.998 - - 0.998 - - - - - - ATP-binding cassette, sub-family A (ABC1), member 3b [Source:ZFIN;Acc:ZDB-GENE-050517-2]
66. ptbp2a ENSDARG00000101947 1921 0.998 - - 0.998 - - - - - - polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
67. DACT3_1 DACT3_1 1235 0.998 - - 0.998 - - - - - -
68. CABZ01034082.1 ENSDARG00000099583 2237 0.998 - - 0.998 - - - - - -
69. si:ch211-10d23.5 ENSDARG00000095510 2632 0.998 - - 0.998 - - - - - - si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
70. fam118b ENSDARG00000078983 1822 0.998 - - 0.998 - - - - - - family with sequence similarity 118, member B [Source:ZFIN;Acc:ZDB-GENE-060810-6]
71. sypl2b ENSDARG00000000690 2006 0.998 - - 0.998 - - - - - - synaptophysin-like 2b [Source:ZFIN;Acc:ZDB-GENE-050417-309]
72. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 0.998 - - 0.998 - - - - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
73. dnaja3a ENSDARG00000058494, ENSDARG00000111151 2497 0.998 - - 0.998 - - - - - - DnaJ (Hsp40) homolog, subfamily A, member 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7837]
74. eif3k ENSDARG00000068289 1102 0.998 - - 0.998 - - - - - - eukaryotic translation initiation factor 3, subunit K [Source:ZFIN;Acc:ZDB-GENE-050417-45]
75. AL772300.3 AL772300.3 1752 0.998 - - 0.998 - - - - - -
76. zbtb33 ENSDARG00000071467, ENSDARG00000112085 1425 0.998 - - 0.998 - - - - - - zinc finger and BTB domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-070412-3]
77. brd8 ENSDARG00000025071 2605 0.998 - - 0.998 - - - - - - bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
78. sh3bgrl3 ENSDARG00000098075 3071 0.997 - - 0.997 - - - - - - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
79. ddx3 ddx3 4076 0.997 - - 0.997 - - - - - -
80. slc39a10 ENSDARG00000005823 2634 0.997 - - 0.997 - - - - - - solute carrier family 39 (zinc transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1157]
81. tbp ENSDARG00000014994 1591 0.997 - - 0.997 - - - - - - TATA box binding protein [Source:ZFIN;Acc:ZDB-GENE-030616-563]
82. ENSDARG00000087348 ENSDARG00000087348 2870 0.997 - - 0.997 - - - - - -
83. pip5k2 pip5k2 5743 0.996 - - 0.996 - - - - - -
84. cdk2 ENSDARG00000026577 2835 0.996 - - 0.996 - - - - - - cyclin-dependent kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2741]
85. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 0.996 - - 0.996 - - - - - - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
86. serpine2 ENSDARG00000029353 2274 0.996 - - 0.996 - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
87. dnmt1 ENSDARG00000030756 2741 0.996 - - 0.996 - - - - - - DNA (cytosine-5-)-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-990714-15]
88. rad23b ENSDARG00000021550 2575 0.995 - - 0.995 - - - - - - RAD23 homolog B, nucleotide excision repair protein [Source:ZFIN;Acc:ZDB-GENE-040426-1487]
89. psma6b ENSDARG00000013966 4410 0.995 - - 0.995 - - - - - - proteasome subunit alpha 6b [Source:ZFIN;Acc:ZDB-GENE-040718-329]
90. msxc msxc 3142 0.994 - - 0.994 - - - - - -
91. ndufv3 ENSDARG00000090389 4829 0.992 - - 0.992 - - - - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
92. zgc:162944 ENSDARG00000069846, ENSDARG00000112524 3898 0.991 - - 0.991 - - - - - - zgc:162944 [Source:ZFIN;Acc:ZDB-GENE-070424-75]
93. stip1 ENSDARG00000004906 7742 0.99 - - 0.990 - - - - - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
94. tle2 5014 0.99 - - 0.990 - - - - - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
95. si:ch1073-286c18.5 ENSDARG00000098567 7391 0.99 - - 0.990 - - - - - - si:ch1073-286c18.5 [Source:ZFIN;Acc:ZDB-GENE-121214-240]
96. gnb4b ENSDARG00000115383 7457 0.989 - - 0.989 - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
97. clic4 ENSDARG00000022995 6064 0.989 - - 0.989 - - - - - - chloride intracellular channel 4 [Source:ZFIN;Acc:ZDB-GENE-030326-3]
98. sepw2a 8597 0.988 - - 0.988 - - - - - - selenoprotein W, 2a
99. gnl3 ENSDARG00000006219 3854 0.988 - - 0.988 - - - - - - guanine nucleotide binding protein-like 3 (nucleolar) [Source:ZFIN;Acc:ZDB-GENE-030131-616]
100. kmt2cb ENSDARG00000075560 4816 0.987 - - 0.987 - - - - - - lysine (K)-specific methyltransferase 2Cb [Source:ZFIN;Acc:ZDB-GENE-070705-340]

There are 1309 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA