Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-215l11.8

Gene Name Gene ID Reads Annotation
si:ch211-215l11.8 si:ch211-215l11.8 0










Genes with expression patterns similar to si:ch211-215l11.8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arhgap21a ENSDARG00000104295 1 1 - - - - - - - - 1.000 Rho GTPase activating protein 21a [Source:ZFIN;Acc:ZDB-GENE-090918-5]
2. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1 - - - - - - - - 1.000 si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
3. hhat ENSDARG00000074428 8 1 - - - - - - - - 1.000 hedgehog acyltransferase [Source:ZFIN;Acc:ZDB-GENE-051118-1]
4. si:ch73-27e22.3 ENSDARG00000077263 10 1 - - - - - - - - 1.000 si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
5. RBBP6_3 RBBP6_3 34 1 - - - - - - - - 1.000
6. EPM2AIP1 EPM2AIP1 4 1 - - - - - - - - 1.000
7. grid2 ENSDARG00000055302, ENSDARG00000110593 1 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]
8. CR774179.1 ENSDARG00000086969 3 1 - - - - - - - - 1.000
9. BX511034.1_1 ENSDARG00000071629 0 1 - - - - - - - - 1.000
10. CR356223.1 ENSDARG00000093865 1 1 - - - - - - - - 1.000
11. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1 - - - - - - - - 1.000 chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
12. ccdc24 ENSDARG00000038793 7 1 - - - - - - - - 1.000 coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
13. BX004873.4 BX004873.4 0 1 - - - - - - - - 1.000
14. ZCCHC6 2 1 - - - - - - - - 1.000 zinc finger, CCHC domain containing 6
15. Metazoa_SRP Metazoa_SRP 1 1 - - - - - - - - 1.000
16. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - - - - - 1.000
17. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
18. GPT GPT 2 1 - - - - - - - - 1.000
19. slc5a5 ENSDARG00000005392 6 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
20. 5S_rRNA_13 5S_rRNA_13 0 1 - - - - - - - - 1.000
21. si:ch211-215m21.29 si:ch211-215m21.29 5 1 - - - - - - - - 1.000
22. rhbdd3 ENSDARG00000079816 2 1 - - - - - - - - 1.000 rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
23. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - - - - - - - - 1.000
24. CNBD1 ENSDARG00000091489 0 1 - - - - - - - - 1.000 cyclic nucleotide binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-1022]
25. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - - - - - - 1.000 potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
26. CABZ01056274.1 CABZ01056274.1 3 1 - - - - - - - - 1.000
27. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - - - - - 1.000
28. GABRA2 ENSDARG00000113737 5 1 - - - - - - - - 1.000 gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
29. slc35c1 ENSDARG00000104669 65 1 - - - - - - - - 1.000 solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
30. ldlrap1b ENSDARG00000039750 2 1 - - - - - - - - 1.000 low density lipoprotein receptor adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1012]
31. CU467982.1 CU467982.1 12 1 - - - - - - - - 1.000
32. FJX1 ENSDARG00000035873 22 1 - - - - - - - - 1.000 four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
33. skila ENSDARG00000023933 2 1 - - - - - - - - 1.000 SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
34. si:dkey-4j21.1 17 1 - - - - - - - - 1.000 si:dkey-4j21.1, transcript variant X2
35. CDK18 ENSDARG00000012204 5 1 - - - - - - - - 1.000 cyclin dependent kinase 18 [Source:HGNC Symbol;Acc:HGNC:8751]
36. agtr1a ENSDARG00000018616 1 1 - - - - - - - - 1.000 angiotensin II receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070912-546]
37. si:ch73-341k19.1 ENSDARG00000095946 5 1 - - - - - - - - 1.000 si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
38. slc47a2 2 1 - - - - - - - - 1.000 solute carrier family 47 (multidrug and toxin extrusion), member 2
39. clec3ba ENSDARG00000076541 3 1 - - - - - - - - 1.000 C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
40. CDR2_1 CDR2_1 8 1 - - - - - - - - 1.000
41. ttc6 ENSDARG00000104125 7 1 - - - - - - - - 1.000 tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
42. ptger2a ENSDARG00000011434 6 1 - - - - - - - - 1.000 prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
43. FP103003.1_1 FP103003.1_1 6 1 - - - - - - - - 1.000
44. si:dkey-274m14.3 si:dkey-274m14.3 7 1 - - - - - - - - 1.000
45. mybpc2a ENSDARG00000030157 11 1 - - - - - - - - 1.000 myosin binding protein C, fast type a [Source:ZFIN;Acc:ZDB-GENE-060901-1]
46. PDE6H 3 1 - - - - - - - - 1.000 phosphodiesterase 6H, cGMP-specific, cone, gamma, transcript variant 2
47. NPM2 NPM2 41 1 - - - - - - - - 1.000
48. si:dkey-188i13.8 ENSDARG00000092725 1 1 - - - - - - - - 1.000 si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
49. LIX1 ENSDARG00000052154 9 1 - - - - - - - - 1.000 limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
50. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - - - 1.000
51. si:ch211-214p13.7 1 1 - - - - - - - - 1.000 si:ch211-214p13.7
52. si:ch211-198e13.3 5 1 - - - - - - - - 1.000 si:ch211-198e13.3, transcript variant X1
53. vcam1a ENSDARG00000078201 1 1 - - - - - - - - 1.000 vascular cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-060503-172]
54. zgc:162724 zgc:162724 9 1 - - - - - - - - 1.000
55. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - - - - - - - 1.000 solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
56. C17H8orf74 C17H8orf74 4 1 - - - - - - - - 1.000
57. CT030048.2 CT030048.2 3 1 - - - - - - - - 1.000
58. CR318624.1 ENSDARG00000094618 5 1 - - - - - - - - 1.000
59. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - - - - 1.000 si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
60. si:dkey-149m13.2 si:dkey-149m13.2 1 1 - - - - - - - - 1.000
61. slc15a1b ENSDARG00000044528 6 1 - - - - - - - - 1.000 solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
62. si:ch211-254p10.2 ENSDARG00000056750 3 1 - - - - - - - - 1.000 si:ch211-254p10.2 [Source:ZFIN;Acc:ZDB-GENE-100922-17]
63. cyp2n13 ENSDARG00000042953 10 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
64. CABZ01030692.1 CABZ01030692.1 0 1 - - - - - - - - 1.000
65. scn1a 8 1 - - - - - - - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
66. CU302316.1 ENSDARG00000109600 2 1 - - - - - - - - 1.000
67. si:dkey-179k24.6 si:dkey-179k24.6 5 1 - - - - - - - - 1.000
68. FP102016.2 FP102016.2 0 1 - - - - - - - - 1.000
69. MEI1 MEI1 2 1 - - - - - - - - 1.000
70. SLCO2B1 ENSDARG00000054609 0 1 - - - - - - - - 1.000 solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
71. zgc:92161 ENSDARG00000101749 27 1 - - - - - - - - 1.000 zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
72. KIAA0319 KIAA0319 2 1 - - - - - - - - 1.000
73. CT737184.1 ENSDARG00000102726 0 1 - - - - - - - - 1.000
74. BX119910.4 BX119910.4 0 1 - - - - - - - - 1.000
75. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - - - - - - 1.000
76. CABZ01074669.1 CABZ01074669.1 12 1 - - - - - - - - 1.000
77. cdc14aa ENSDARG00000013858 18 1 - - - - - - - - 1.000 cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
78. BX927130.1 ENSDARG00000099328 7 1 - - - - - - - - 1.000 si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
79. htr5al htr5al 6 1 - - - - - - - - 1.000
80. si:ch1073-109g21.1 si:ch1073-109g21.1 0 1 - - - - - - - - 1.000
81. tecpr1a ENSDARG00000062515 7 1 - - - - - - - - 1.000 tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
82. si:dkey-98f17.5 ENSDARG00000068863, ENSDARG00000116489 7 1 - - - - - - - - 1.000 si:dkey-98f17.5 [Source:ZFIN;Acc:ZDB-GENE-060526-354]
83. CABZ01112732.1 ENSDARG00000068453 4 1 - - - - - - - - 1.000 tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
84. wdr27 ENSDARG00000053386 2 1 - - - - - - - - 1.000 WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
85. PLA2G4C_1 PLA2G4C_1 2 1 - - - - - - - - 1.000
86. cyp2p9 ENSDARG00000022631 1 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily P, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-040120-2]
87. BX546499.1 ENSDARG00000092602 1 1 - - - - - - - - 1.000
88. zgc:172323 ENSDARG00000053201 1 1 - - - - - - - - 1.000 zgc:172323 [Source:ZFIN;Acc:ZDB-GENE-080204-113]
89. si:dkey-34f9.2 si:dkey-34f9.2 0 1 - - - - - - - - 1.000
90. ubb ENSDARG00000093313, ENSDARG00000112953 4 1 - - - - - - - - 1.000 ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]
91. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 - - - - - - - - 1.000 si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
92. or131-2 ENSDARG00000073812 0 1 - - - - - - - - 1.000 odorant receptor, family H, subfamily 131, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-46]
93. CNGB3 CNGB3 7 1 - - - - - - - - 1.000
94. ARAP1 3 1 - - - - - - - - 1.000 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
95. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - - - - - - - - 1.000
96. si:ch211-145h19.4 si:ch211-145h19.4 1 1 - - - - - - - - 1.000
97. si:ch211-197g22.1 si:ch211-197g22.1 1 1 - - - - - - - - 1.000
98. FAM185A ENSDARG00000019142 3 1 - - - - - - - - 1.000 family with sequence similarity 185, member A [Source:ZFIN;Acc:ZDB-GENE-131121-241]
99. BX321870.1 ENSDARG00000098519 9 1 - - - - - - - - 1.000
100. si:dkey-25o1.6 si:dkey-25o1.6 5 1 - - - - - - - - 1.000

There are 68 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA