Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-215c18.3

Gene Name Gene ID Reads Annotation
si:ch211-215c18.3 ENSDARG00000095308 11 si:ch211-215c18.3 [Source:ZFIN;Acc:ZDB-GENE-060526-105]










Genes with expression patterns similar to si:ch211-215c18.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-215c18.3 ENSDARG00000095308 11 4 1.000 - 1.000 - - - - 1.000 1.000 si:ch211-215c18.3 [Source:ZFIN;Acc:ZDB-GENE-060526-105]
2. si:dkey-200l5.4 ENSDARG00000095294 13 2 1.000 - - - - - - - 1.000 si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
3. si:dkey-79c1.1 ENSDARG00000093179 11 1.943 1.000 - - - - - - 0.943 - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
4. si:dkey-148e22.3 si:dkey-148e22.3 4 1.921 - - - - - - - 1.000 0.921
5. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1.885 1.000 - - - - - - - 0.885 si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
6. ENSDARG00000096199 ENSDARG00000096199 15 1.739 1.000 - - - - - - - 0.739
7. CR388013.3 CR388013.3 45 1.462 - - 0.713 - - - - 0.749 -
8. CABZ01072254.1 ENSDARG00000076111 4 1 - - - - - - - 1.000 - glucoside xylosyltransferase 1a [Source:NCBI gene;Acc:100333154]
9. fbn2a ENSDARG00000051896 2 1 - - - - - - - - 1.000 fibrillin 2a [Source:ZFIN;Acc:ZDB-GENE-090112-4]
10. ccdc79 2 1 - - - - - - - - 1.000 coiled-coil domain containing 79
11. kcng4 kcng4 37 1 1.000 - - - - - - - -
12. BX530018.1 ENSDARG00000037576 2 1 1.000 - - - - - - - - D(1) dopamine receptor-like [Source:NCBI gene;Acc:567498]
13. si:dkey-265k11.2 si:dkey-265k11.2 44 1 1.000 - - - - - - - -
14. dre-mir-2189 ENSDARG00000098723 9 1 - - - - - - - 1.000 - dre-mir-2189 [Source:miRBase;Acc:MI0010851]
15. paqr5a ENSDARG00000041145, ENSDARG00000115247 38 1 1.000 - - - - - - - - progestin and adipoQ receptor family member Va [Source:ZFIN;Acc:ZDB-GENE-040426-867]
16. CABZ01053592.1 ENSDARG00000117388 6 1 1.000 - - - - - - - -
17. tlr5a ENSDARG00000044415 3 1 - - - - - - - - 1.000 toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
18. MAMDC4 MAMDC4 3 1 1.000 - - - - - - - -
19. mlphb ENSDARG00000062481 14 1 1.000 - - - - - - - - melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]
20. cnn1b ENSDARG00000102398 40 1 1.000 - - - - - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
21. CNGA1 3 1 - - - - - - - 1.000 - cyclic nucleotide gated channel alpha 1
22. CABZ01076817.1 CABZ01076817.1 4 1 1.000 - - - - - - - -
23. FUT9 FUT9 91 1 1.000 - - - - - - - -
24. npffr2.1 npffr2.1 60 1 1.000 - - - - - - - -
25. synpr ENSDARG00000044278 20 1 1.000 - - - - - - - - synaptoporin [Source:ZFIN;Acc:ZDB-GENE-030616-625]
26. BX324155.2 BX324155.2 1 1 1.000 - - - - - - - -
27. si:dkeyp-123a12.1 si:dkeyp-123a12.1 1 1 - - - - - - - - 1.000
28. TMEM241 ENSDARG00000090685 11 1 - - - - - - - - 1.000 transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
29. SNORA31 SNORA31 23 1 1.000 - - - - - - - -
30. kcnt1 ENSDARG00000079484 45 1 1.000 - - - - - - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
31. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 1.000 - - - - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
32. si:dkey-179k24.6 si:dkey-179k24.6 5 1 1.000 - - - - - - - -
33. ft2 ENSDARG00000109567 5 1 - - - - - - - - 1.000 alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
34. CU570691.1 ENSDARG00000088908 5 1 1.000 - - - - - - - -
35. CREB3L3 CREB3L3 24 1 - - - - - - - - 1.000
36. FAXC FAXC 102 1 1.000 - - - - - - - -
37. mespab ENSDARG00000068761 1 1 - - - - - - - - 1.000 mesoderm posterior ab [Source:ZFIN;Acc:ZDB-GENE-090817-2]
38. tmem196b ENSDARG00000090140 20 1 1.000 - - - - - - - - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
39. SNORA57 SNORA57 148 1 - - - - - - - 1.000 -
40. zar1l ENSDARG00000055973, ENSDARG00000116232 2 1 - - - - - - - 1.000 - zygote arrest 1-like [Source:ZFIN;Acc:ZDB-GENE-060810-119]
41. PSMB11 PSMB11 3 1 - - - - - - - - 1.000
42. pm20d1.1 ENSDARG00000037551 11 1 - - - - - - - 1.000 - peptidase M20 domain containing 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-051120-102]
43. si:dkey-66n24.2 si:dkey-66n24.2 69 1 1.000 - - - - - - - -
44. jakmip2 ENSDARG00000053547 32 1 1.000 - - - - - - - - janus kinase and microtubule interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-293]
45. BX470131.1 BX470131.1 86 1 1.000 - - - - - - - -
46. CSMD1 CSMD1 15 1 1.000 - - - - - - - -
47. si:ch73-335d12.2 ENSDARG00000025505 1 1 - - - - - - - 1.000 - si:ch73-335d12.2 [Source:ZFIN;Acc:ZDB-GENE-060503-423]
48. AP5Z1 ENSDARG00000078111 91 1 1.000 - - - - - - - - adaptor related protein complex 5 subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-120508-2]
49. BX321871.2 BX321871.2 1 1 - - - - - - - - 1.000
50. rtn4r ENSDARG00000090035 46 1 1.000 - - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
51. chst2b ENSDARG00000058585 33 1 1.000 - - - - - - - - carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b [Source:ZFIN;Acc:ZDB-GENE-060720-33]
52. NPBWR2 NPBWR2 132 1 1.000 - - - - - - - -
53. LRRC38 LRRC38 5 1 - - - - - - - 1.000 -
54. BX323861.1 ENSDARG00000099765 37 1 1.000 - - - - - - - -
55. CR848787.1 CR848787.1 2 1 - - - - - - - - 1.000
56. lppr5b lppr5b 23 1 1.000 - - - - - - - -
57. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 1 - - - - - - - 1.000 - vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
58. ADAP2 ENSDARG00000070565 29 1 1.000 - - - - - - - - ArfGAP with dual PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-070912-21]
59. PGBD4 ENSDARG00000079328 20 1 1.000 - - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
60. sycp3 ENSDARG00000013438 25 1 1.000 - - - - - - - - synaptonemal complex protein 3 [Source:ZFIN;Acc:ZDB-GENE-040910-2]
61. si:dkey-4j21.1 17 1 1.000 - - - - - - - - si:dkey-4j21.1, transcript variant X2
62. AL935141.5 AL935141.5 24 1 - - - - - - - - 1.000
63. asic1b ENSDARG00000101866 61 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
64. CABZ01113978.1 CABZ01113978.1 1 1 1.000 - - - - - - - -
65. si:dkey-56m15.4 si:dkey-56m15.4 39 1 1.000 - - - - - - - -
66. C24H7orf10 C24H7orf10 7 1 - - - - - - - - 1.000
67. si:ch211-14g4.4 si:ch211-14g4.4 6 1 1.000 - - - - - - - -
68. SNORA19 SNORA19 24 1 1.000 - - - - - - - -
69. BX548021.2 BX548021.2 4 1 1.000 - - - - - - - -
70. gdf10b ENSDARG00000073891 116 1 1.000 - - - - - - - - growth differentiation factor 10b [Source:ZFIN;Acc:ZDB-GENE-120316-1]
71. si:dkey-17e6.2 si:dkey-17e6.2 72 1 1.000 - - - - - - - -
72. MAST1 MAST1 29 1 1.000 - - - - - - - -
73. si:ch211-187d1.1 si:ch211-187d1.1 4 1 - - - - - - - - 1.000
74. wu:fj39g12 ENSDARG00000043460 8 1 1.000 - - - - - - - - wu:fj39g12 [Source:ZFIN;Acc:ZDB-GENE-030131-7901]
75. si:ch211-113a14.14 si:ch211-113a14.14 3 1 1.000 - - - - - - - -
76. trim9 ENSDARG00000039123 53 1 1.000 - - - - - - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
77. zgc:174694 zgc:174694 2 1 1.000 - - - - - - - -
78. ENSDARG00000029805 ENSDARG00000029805 4 1 - - - - - - - - 1.000
79. si:dkey-102c8.2 ENSDARG00000058537, ENSDARG00000112361 3 1 - - - - - - - 1.000 - si:dkey-102c8.2 [Source:ZFIN;Acc:ZDB-GENE-050208-329]
80. si:dkey-233h12.2 si:dkey-233h12.2 1 1 1.000 - - - - - - - -
81. kcng1 ENSDARG00000099038 23 1 1.000 - - - - - - - - potassium voltage-gated channel, subfamily G, member 1 [Source:ZFIN;Acc:ZDB-GENE-080220-5]
82. VASH1 ENSDARG00000092716 33 1 1.000 - - - - - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
83. CABZ01021433.1 ENSDARG00000105696 74 1 1.000 - - - - - - - - si:cabz01021433.2 [Source:NCBI gene;Acc:100333857]
84. si:ch211-210c8.5 si:ch211-210c8.5 6 1 1.000 - - - - - - - -
85. BICD1 BICD1 9 1 1.000 - - - - - - - -
86. FER1L6 ENSDARG00000019316 5 1 - - - - - - - - 1.000 fer-1-like family member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-312]
87. s100t ENSDARG00000055589 453 1 1.000 - - - - - - - - S100 calcium binding protein T [Source:ZFIN;Acc:ZDB-GENE-050320-61]
88. DLK1 60 1 1.000 - - - - - - - - delta like non-canonical Notch ligand 1
89. zdhhc12b ENSDARG00000052787 43 1 1.000 - - - - - - - - zinc finger, DHHC-type containing 12b [Source:ZFIN;Acc:ZDB-GENE-070705-356]
90. PRKD2_1 PRKD2_1 1 1 - - - - - - - 1.000 -
91. zgc:153039 ENSDARG00000102724 4 1 1.000 - - - - - - - - zgc:153039 [Source:ZFIN;Acc:ZDB-GENE-060929-736]
92. RBBP6_6 RBBP6_6 1 1 - - - - - - - 1.000 -
93. sema7a ENSDARG00000078707 70 1 1.000 - - - - - - - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
94. LRFN2_1 LRFN2_1 17 1 1.000 - - - - - - - -
95. eif4e1b ENSDARG00000014565 12 1 - - - - - - - - 1.000 eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]
96. tlr8a ENSDARG00000090119 1 1 - - - - - - - - 1.000 toll-like receptor 8a [Source:ZFIN;Acc:ZDB-GENE-040219-13]
97. pnp4b ENSDARG00000029230 6 1 - - - - - - - - 1.000 purine nucleoside phosphorylase 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1887]
98. LPHN1_1 LPHN1_1 7 1 1.000 - - - - - - - -
99. shank2 ENSDARG00000062325 66 1 1.000 - - - - - - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
100. si:dkey-266f7.10 ENSDARG00000086613 7 1 1.000 - - - - - - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]

There are 499 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA