Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-214c7.4

Gene Name Gene ID Reads Annotation
si:ch211-214c7.4 ENSDARG00000069595 56 si:ch211-214c7.4 [Source:ZFIN;Acc:ZDB-GENE-030131-6275]










Genes with expression patterns similar to si:ch211-214c7.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-214c7.4 ENSDARG00000069595 56 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-214c7.4 [Source:ZFIN;Acc:ZDB-GENE-030131-6275]
2. hivep3a ENSDARG00000075928 17 2.97 - 0.970 - - - 1.000 1.000 - - human immunodeficiency virus type I enhancer binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-081029-2]
3. TMEM151A ENSDARG00000077986 78 2.592 - 0.733 - - - 0.904 0.955 - - transmembrane protein 151A [Source:HGNC Symbol;Acc:HGNC:28497]
4. ankk1 ENSDARG00000056921 119 2.59 - 0.819 - - - 0.966 - - 0.805 ankyrin repeat and kinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071015-4]
5. wfs1b ENSDARG00000074617 69 2.578 0.801 0.777 - - - 1.000 - - - Wolfram syndrome 1b (wolframin) [Source:ZFIN;Acc:ZDB-GENE-050809-19]
6. zgc:153615 ENSDARG00000038981 105 2.455 0.847 - - - - 0.762 0.846 - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
7. nrxn3a ENSDARG00000043746 54 2.387 - 0.777 - - - 0.847 0.763 - - neurexin 3a [Source:ZFIN;Acc:ZDB-GENE-070206-9]
8. adam11 ENSDARG00000079204 298 2.285 - 0.729 - - - 0.751 0.805 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
9. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 2.166 - 0.719 - - - 0.738 0.709 - - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
10. nmu ENSDARG00000043299 67 2 - - - - - 1.000 1.000 - - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
11. skor1a ENSDARG00000069030 19 2 - - - - - 1.000 1.000 - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
12. slc41a1 ENSDARG00000070214, ENSDARG00000114707 20 2 - - - - - 1.000 1.000 - - solute carrier family 41 (magnesium transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4700]
13. PLCB1 2 2 - - - - - 1.000 1.000 - - phospholipase C beta 1
14. si:dkey-122c11.4 si:dkey-122c11.4 13 2 - - - - - 1.000 1.000 - -
15. dnm1a ENSDARG00000010042 43 1.959 - - - - - 0.959 1.000 - - dynamin 1a [Source:ZFIN;Acc:ZDB-GENE-081104-27]
16. pygo1 ENSDARG00000098687 4 1.948 0.948 - - - - 1.000 - - - pygopus family PHD finger 1 [Source:ZFIN;Acc:ZDB-GENE-080204-62]
17. nrg2b ENSDARG00000086585 100 1.893 - - - - - 0.893 1.000 - - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
18. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1.877 - - - - - 0.877 1.000 - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
19. erap2 ENSDARG00000098618 16 1.877 0.948 - - - - - 0.929 - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
20. fsd1 ENSDARG00000062017 207 1.875 - - - - - 0.985 0.890 - - fibronectin type III and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-218]
21. erbb4a ENSDARG00000063207 55 1.859 - - - - - 0.859 1.000 - - erb-b2 receptor tyrosine kinase 4a [Source:ZFIN;Acc:ZDB-GENE-030918-4]
22. si:ch211-117m20.4 ENSDARG00000094286 7 1.856 - - 0.856 - - - 1.000 - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
23. elmod1 ENSDARG00000062056, ENSDARG00000113222 10 1.847 - - - - - 0.847 1.000 - - ELMO/CED-12 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070112-262]
24. ARHGEF10L ARHGEF10L 18 1.834 - - 0.834 - - 1.000 - - -
25. si:dkey-253a1.2 si:dkey-253a1.2 52 1.828 - - - - - 0.923 0.905 - -
26. tbc1d25 ENSDARG00000075333 126 1.827 0.948 - - - - 0.879 - - - TBC1 domain family, member 25 [Source:ZFIN;Acc:ZDB-GENE-041111-25]
27. CU855953.1 CU855953.1 137 1.823 0.948 - - - - - 0.875 - -
28. C18H19orf47 C18H19orf47 44 1.818 0.818 - - - - - 1.000 - -
29. CCNO 21 1.813 - - - 0.813 - - 1.000 - - cyclin O
30. asah1a ENSDARG00000037091, ENSDARG00000112187 390 1.808 0.948 0.860 - - - - - - - N-acylsphingosine amidohydrolase (acid ceramidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041010-191]
31. chmp2ba ENSDARG00000068683, ENSDARG00000113182, ENSDARG00000114167 20 1.806 0.948 - 0.858 - - - - - - charged multivesicular body protein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070628-3]
32. CHD6 ENSDARG00000017244 219 1.788 - 0.788 - - - - 1.000 - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
33. SNORD18_1 SNORD18_1 5 1.777 - 0.777 - - - - 1.000 - -
34. ppp2r2c ppp2r2c 441 1.759 - - - - - 0.821 0.938 - -
35. DNAJC14 ENSDARG00000105398 20 1.758 0.758 - - - - - 1.000 - - DnaJ (Hsp40) homolog, subfamily C, member 14 [Source:ZFIN;Acc:ZDB-GENE-121105-7]
36. mgrn1a ENSDARG00000100072 263 1.751 - - - - - - 1.000 - 0.751 mahogunin, ring finger 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6192]
37. zgc:113229 ENSDARG00000037398, ENSDARG00000117068 14 1.748 0.948 0.800 - - - - - - - zgc:113229 [Source:ZFIN;Acc:ZDB-GENE-050417-475]
38. C5H9orf171 C5H9orf171 34 1.745 0.792 - - 0.953 - - - - -
39. dmrt3a ENSDARG00000035290, ENSDARG00000114587 115 1.744 - 0.777 - - - - 0.967 - - doublesex and mab-3 related transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-021220-3]
40. ntng2a ENSDARG00000077367 43 1.744 - - 0.744 - - - 1.000 - - netrin g2a [Source:ZFIN;Acc:ZDB-GENE-081105-186]
41. CABZ01029822.1 ENSDARG00000086931 1654 1.744 - - - - - 0.897 0.847 - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
42. NRG3 NRG3 22 1.739 - - - - - 0.739 1.000 - -
43. rad51d ENSDARG00000026400 108 1.732 0.869 - - - - 0.863 - - - RAD51 paralog D [Source:ZFIN;Acc:ZDB-GENE-040426-2490]
44. scn1bb ENSDARG00000105003 239 1.727 - - - - - 0.886 0.841 - - sodium channel, voltage-gated, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-090408-1]
45. grin2ca ENSDARG00000078149 13 1.715 - - - 0.715 - 1.000 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca [Source:ZFIN;Acc:ZDB-GENE-070822-3]
46. PDZD4 ENSDARG00000090564 131 1.712 - - - - - 0.910 0.802 - - PDZ domain containing 4 [Source:HGNC Symbol;Acc:HGNC:21167]
47. prdm14 ENSDARG00000045371 106 1.712 - - - - - 0.712 1.000 - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
48. FDXACB1 ENSDARG00000095750 98 1.705 - - - - 0.705 - 1.000 - - ferredoxin-fold anticodon binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8403]
49. evx2 ENSDARG00000059255 317 1.704 - - - - - 0.715 0.989 - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
50. CABZ01063077.1 CABZ01063077.1 22 1.7 - 0.777 - - - - 0.923 - -
51. si:ch211-237c9.3 si:ch211-237c9.3 17 1.7 0.856 - - - - - 0.844 - -
52. INA INA 950 1.695 - 0.763 - - - - 0.932 - -
53. gatsl3 7 1.68 0.948 - - 0.732 - - - - - GATS protein-like 3
54. nsmfa ENSDARG00000060025 70 1.671 - - 0.730 - - 0.941 - - - NMDA receptor synaptonuclear signaling and neuronal migration factor a [Source:ZFIN;Acc:ZDB-GENE-091204-32]
55. zfp64 ENSDARG00000061147 44 1.67 - 0.968 - - - 0.702 - - - zinc finger protein 64 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-031118-80]
56. necab2 ENSDARG00000056745, ENSDARG00000110976 304 1.664 - - - - - 0.705 0.959 - - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]
57. ADCK3 101 1.663 0.948 0.715 - - - - - - - aarF domain containing kinase 3
58. kcnk9 ENSDARG00000104563 92 1.66 - - - - - 0.917 0.743 - - potassium channel, subfamily K, member 9 [Source:ZFIN;Acc:ZDB-GENE-070705-260]
59. tbpl2 ENSDARG00000097302 70 1.65 0.876 0.774 - - - - - - - TATA box binding protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040520-3]
60. SKOR2 SKOR2 1041 1.642 - - - - - 0.722 0.920 - -
61. cntn3a.1 ENSDARG00000062880 156 1.642 0.901 0.741 - - - - - - - contactin 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-081030-10]
62. RPS6KL1 ENSDARG00000079024 22 1.636 - 0.777 - - - - 0.859 - - ribosomal protein S6 kinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-111020-10]
63. mir34 176 1.634 - - 0.743 - - - 0.891 - - microRNA 34
64. zgc:171318 zgc:171318 42 1.623 0.746 - - - - 0.877 - - -
65. BX571853.2 ENSDARG00000110441 21 1.613 - - - 0.867 - 0.746 - - -
66. zgc:112437 ENSDARG00000009215 50 1.611 - 0.873 - - - - - - 0.738 zgc:112437 [Source:ZFIN;Acc:ZDB-GENE-050417-293]
67. cd40 ENSDARG00000054968 90 1.605 - - - - - 0.874 - - 0.731 CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]
68. pou4f1 ENSDARG00000005559 821 1.604 - - - - - 0.817 0.787 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
69. rab6bb ENSDARG00000031343 1381 1.603 - 0.784 - - - - 0.819 - - RAB6B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-050320-28]
70. bai3 bai3 92 1.601 - - - - - 0.818 0.783 - -
71. comta ENSDARG00000015337 93 1.599 0.746 - - - - - - - 0.853 catechol-O-methyltransferase a [Source:ZFIN;Acc:ZDB-GENE-050913-117]
72. rab39b rab39b 449 1.598 - - - - - 0.765 0.833 - -
73. WNK2 ENSDARG00000104989 429 1.597 - - - - - 0.821 0.776 - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
74. epha6 ENSDARG00000022971 52 1.596 - 0.783 - - - - - - 0.813 eph receptor A6 [Source:ZFIN;Acc:ZDB-GENE-090311-43]
75. CR847998.1 ENSDARG00000104784 518 1.596 - - - - - 0.757 0.839 - -
76. SLC22A23_1 SLC22A23_1 308 1.587 - - - - - 0.853 0.734 - -
77. nlgn3b ENSDARG00000062376 171 1.586 - - - - - 0.803 0.783 - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
78. ncam1b ENSDARG00000007220 233 1.585 - - - - - 0.815 0.770 - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
79. fgf12a ENSDARG00000027957 143 1.574 0.777 - - - - - 0.797 - - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
80. dcaf11 ENSDARG00000009868, ENSDARG00000113596 57 1.574 - 0.759 - - - - - - 0.815 ddb1 and cul4 associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-050809-116]
81. tmem150c ENSDARG00000069590 94 1.567 - - - - - - 0.838 - 0.729 transmembrane protein 150C [Source:ZFIN;Acc:ZDB-GENE-090112-5]
82. nbeaa ENSDARG00000070080 862 1.563 - 0.741 - - - - 0.822 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
83. GPR158 GPR158 64 1.561 - 0.765 0.796 - - - - - -
84. si:dkeyp-117h8.2 ENSDARG00000011602 260 1.546 - - - - - 0.818 0.728 - - si:dkeyp-117h8.2 [Source:ZFIN;Acc:ZDB-GENE-041210-321]
85. KIF1A KIF1A 1686 1.541 - 0.753 - - - - 0.788 - -
86. nt5c1ba ENSDARG00000018153 31 1.54 - 0.752 - - - - 0.788 - - 5'-nucleotidase, cytosolic IB a [Source:ZFIN;Acc:ZDB-GENE-070424-103]
87. si:ch73-96b22.1 si:ch73-96b22.1 393 1.537 0.780 0.757 - - - - - - -
88. SLC16A3 ENSDARG00000045051 83 1.526 - - - - - 0.810 - - 0.716 solute carrier family 16 (monocarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5487]
89. gabra5 ENSDARG00000070730 156 1.523 - 0.777 - - - - 0.746 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
90. BSN_1 BSN_1 21 1.522 - - - - - 0.746 0.776 - -
91. si:dkeyp-33e11.2 si:dkeyp-33e11.2 232 1.516 - 0.794 - - - - 0.722 - -
92. NPTXR NPTXR 241 1.508 - - - - - 0.737 0.771 - -
93. bhlha15 ENSDARG00000045166 67 1.507 0.776 - - - - 0.731 - - - basic helix-loop-helix family, member a15 [Source:ZFIN;Acc:ZDB-GENE-070803-3]
94. si:ch211-278j3.3 ENSDARG00000020284 478 1.505 - 0.737 - - - - 0.768 - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
95. s100s ENSDARG00000036773 90 1.504 0.727 0.777 - - - - - - - S100 calcium binding protein S [Source:ZFIN;Acc:ZDB-GENE-040822-31]
96. snap25b ENSDARG00000058117 469 1.502 - - - - - 0.733 0.769 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
97. ppfia4 ENSDARG00000053205 276 1.501 - 0.767 - - - 0.734 - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070720-14]
98. scn2b ENSDARG00000101713 796 1.498 - - - - - 0.772 0.726 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
99. itga10 ENSDARG00000002507 158 1.495 0.792 0.703 - - - - - - - integrin, alpha 10 [Source:ZFIN;Acc:ZDB-GENE-100922-54]
100. BX255895.1 BX255895.1 29 1.48 0.778 - - - - 0.702 - - -

There are 1770 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA