Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-213i16.4

Gene Name Gene ID Reads Annotation
si:ch211-213i16.4 8 si:ch211-213i16.4, transcript variant X1










Genes with expression patterns similar to si:ch211-213i16.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-213i16.4 8 7 - 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 si:ch211-213i16.4, transcript variant X1
2. dusp3b ENSDARG00000060130 3 2 - 1.000 - - - - 1.000 - - dual specificity phosphatase 3b [Source:ZFIN;Acc:ZDB-GENE-030616-38]
3. pappab ENSDARG00000059858 11 2 - 1.000 - - - - 1.000 - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
4. eif2b5 ENSDARG00000074995 8 1.993 - 1.000 - - - - - - 0.993 eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]
5. si:ch211-113a14.26_4 31 1.96 - - - - - - 1.000 - 0.960 si:ch211-113a14.26
6. lepa ENSDARG00000091085 11 1.948 - 1.000 - - - - - - 0.948 leptin a [Source:ZFIN;Acc:ZDB-GENE-081001-1]
7. rhoab ENSDARG00000094673 26 1.931 - - - - 0.931 - 1.000 - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
8. lgalslb ENSDARG00000055525 18 1.893 - 1.000 - - 0.893 - - - - lectin, galactoside-binding-like b [Source:ZFIN;Acc:ZDB-GENE-030616-570]
9. SERINC3 SERINC3 21 1.884 - 1.000 - - - - - - 0.884
10. mapkap1 ENSDARG00000091777 8 1.879 - - - 0.879 - - 1.000 - - mitogen-activated protein kinase associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-178]
11. si:ch73-290k24.5 ENSDARG00000076310 39 1.849 - 1.000 - - 0.849 - - - - si:ch73-290k24.5 [Source:ZFIN;Acc:ZDB-GENE-110411-284]
12. adora1 adora1 149 1.839 - 1.000 - - - - 0.839 - -
13. NRSN2 NRSN2 57 1.827 - 1.000 - - - - 0.827 - -
14. nrgna ENSDARG00000039626 50 1.785 - - - 0.861 - - 0.924 - - neurogranin (protein kinase C substrate, RC3) a [Source:ZFIN;Acc:ZDB-GENE-090710-4]
15. si:ch211-113a14.26_3 6 1.778 - 1.000 0.778 - - - - - - si:ch211-113a14.26
16. dnajb2 ENSDARG00000058644 30 1.742 - 1.000 - - - - 0.742 - - DnaJ (Hsp40) homolog, subfamily B, member 2 [Source:ZFIN;Acc:ZDB-GENE-061013-537]
17. lppr5b lppr5b 23 1.741 - 1.000 - - - - - - 0.741
18. CU694254.1 CU694254.1 4 1.733 - 1.000 0.733 - - - - - -
19. zgc:152951 ENSDARG00000068663, ENSDARG00000113135 22 1.727 - 1.000 0.727 - - - - - - zgc:152951 [Source:ZFIN;Acc:ZDB-GENE-060929-416]
20. si:ch211-240g9.1 36 1.704 - 0.704 - - - - 1.000 - - si:ch211-240g9.1
21. si:ch211-106n13.3 ENSDARG00000052633 3 1.704 - 0.704 - - - - 1.000 - - si:ch211-106n13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9088]
22. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 1.689 - - - 0.906 - - - - 0.783 v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
23. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.652 - 0.822 - - - - 0.830 - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
24. bicc2 ENSDARG00000076557 77 1.547 - 0.704 - - - - 0.843 - - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
25. zgc:136493 ENSDARG00000029259 132 1.53 - 0.818 - - - - - - 0.712 zgc:136493 [Source:ZFIN;Acc:ZDB-GENE-060512-216]
26. mapk8a ENSDARG00000031888 44 1.523 - - - 0.781 - - 0.742 - - mitogen-activated protein kinase 8a [Source:ZFIN;Acc:ZDB-GENE-080218-17]
27. diaph2 ENSDARG00000076060 26 1.51 - 0.704 - - 0.806 - - - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
28. GIPC3 ENSDARG00000053074 182 1.504 - 0.791 - - - - 0.713 - - GIPC PDZ domain containing family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-326]
29. FKBPL ENSDARG00000095322 82 1.481 - 0.763 - - - - 0.718 - - FK506 binding protein like [Source:ZFIN;Acc:ZDB-GENE-030131-4744]
30. c3c c3c 174 1 - 1.000 - - - - - - -
31. zgc:77112 ENSDARG00000015657 24 1 - 1.000 - - - - - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
32. si:ch211-214p13.3 ENSDARG00000087403 0 1 - 1.000 - - - - - - - si:ch211-214p13.3 [Source:ZFIN;Acc:ZDB-GENE-060503-779]
33. gpsm1a ENSDARG00000092517 784 1 - - - - - - 1.000 - - G protein signaling modulator 1a [Source:ZFIN;Acc:ZDB-GENE-060526-302]
34. CABZ01117437.1 CABZ01117437.1 11 1 - - - - - - 1.000 - -
35. FP236542.1 ENSDARG00000116988 1 1 - - - - - - 1.000 - - alpha-2B adrenergic receptor-like [Source:NCBI gene;Acc:100330650]
36. zgc:174697 zgc:174697 128 1 - 1.000 - - - - - - -
37. SEMA6B SEMA6B 35 1 - 1.000 - - - - - - -
38. ZNF648 ENSDARG00000104823 194 1 - 1.000 - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
39. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 - 1.000 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
40. GPR32 GPR32 0 1 - - - - - - 1.000 - -
41. PEG3_35 PEG3_35 52 1 - - - - - - 1.000 - -
42. ptger1c ENSDARG00000078602, ENSDARG00000110042 2 1 - 1.000 - - - - - - - prostaglandin E receptor 1c (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-120917-4]
43. BX321871.2 BX321871.2 1 1 - 1.000 - - - - - - -
44. cdk20 ENSDARG00000003867 27 1 - - - - - - 1.000 - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
45. GAS2_1 GAS2_1 16 1 - 1.000 - - - - - - -
46. RGS9BP ENSDARG00000086756 65 1 - 1.000 - - - - - - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
47. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1 - 1.000 - - - - - - -
48. si:dkey-162b3.5 si:dkey-162b3.5 24 1 - - - - - - 1.000 - -
49. BX649394.1 BX649394.1 1 1 - - - - - - 1.000 - -
50. CR847504.1 ENSDARG00000102515 29 1 - 1.000 - - - - - - -
51. tacr2 ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 4 1 - - - - - - 1.000 - - tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188]
52. evlb ENSDARG00000099720 245 1 - 1.000 - - - - - - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
53. si:dkey-222f2.3 si:dkey-222f2.3 8 1 - 1.000 - - - - - - -
54. hspb3 ENSDARG00000067714, ENSDARG00000116486 83 1 - 1.000 - - - - - - - heat shock protein, alpha-crystallin-related, b3 [Source:ZFIN;Acc:ZDB-GENE-070705-338]
55. fbxo41 ENSDARG00000078908 95 1 - 1.000 - - - - - - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
56. kcnip3a ENSDARG00000034229 63 1 - 1.000 - - - - - - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
57. XKR7 ENSDARG00000026333 175 1 - 1.000 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
58. chia.3 ENSDARG00000009612 14 1 - - - - - - - - 1.000 chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
59. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1 - 1.000 - - - - - - - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
60. pappa2 ENSDARG00000076020 89 1 - 1.000 - - - - - - - pappalysin 2 [Source:ZFIN;Acc:ZDB-GENE-070912-525]
61. si:dkey-246g23.2 ENSDARG00000062964 5 1 - - - - - - - 1.000 - si:dkey-246g23.2 [Source:ZFIN;Acc:ZDB-GENE-050419-100]
62. zgc:163061 ENSDARG00000075538, ENSDARG00000076766 54 1 - - - - - - 1.000 - - zgc:163061 [Source:ZFIN;Acc:ZDB-GENE-070410-132]
63. klhl6 ENSDARG00000026990 24 1 - 1.000 - - - - - - - kelch-like family member 6 [Source:ZFIN;Acc:ZDB-GENE-030616-325]
64. CLDN20 26 1 - - - - - - 1.000 - - claudin 20, transcript variant X2
65. CR352260.1 CR352260.1 11 1 - 1.000 - - - - - - -
66. CU695076.1 CU695076.1 7 1 - 1.000 - - - - - - -
67. ulk3 ENSDARG00000101661 69 1 - - - - - - 1.000 - - unc-51 like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070410-33]
68. rhobtb2b ENSDARG00000089340 4 1 - 1.000 - - - - - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
69. PGBD4 ENSDARG00000079328 20 1 - 1.000 - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
70. fhit_1 ENSDARG00000078195 91 1 - - - - - - 1.000 - - fragile histidine triad gene [Source:ZFIN;Acc:ZDB-GENE-040426-1703]
71. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 1 - - - - - - 1.000 - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
72. scin ENSDARG00000010728, ENSDARG00000111092 437 1 - 1.000 - - - - - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
73. KIF21B ENSDARG00000009733 53 1 - - - - - - 1.000 - - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
74. zgc:153345 ENSDARG00000055622 29 1 - - - - - - 1.000 - - zgc:153345 [Source:ZFIN;Acc:ZDB-GENE-061103-487]
75. abcg2b ENSDARG00000079361, ENSDARG00000110043 11 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family G (WHITE), member 2b [Source:ZFIN;Acc:ZDB-GENE-050517-36]
76. si:dkey-20f20.3 si:dkey-20f20.3 7 1 - - - - - - - 1.000 -
77. si:ch73-49p17.1 69 1 - 1.000 - - - - - - - si:ch73-49p17.1
78. brinp3b ENSDARG00000075352 14 1 - - - - - - 1.000 - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
79. sprn ENSDARG00000056004 128 1 - 1.000 - - - - - - - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
80. igsf21b ENSDARG00000056084 6 1 - 1.000 - - - - - - - immunoglobin superfamily, member 21b [Source:ZFIN;Acc:ZDB-GENE-070424-59]
81. cthrc1b ENSDARG00000001971 44 1 - 1.000 - - - - - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
82. frmd4bb ENSDARG00000076496 18 1 - - - - - - 1.000 - - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
83. ZSWIM2 ENSDARG00000075700 8 1 - - - - - - 1.000 - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
84. foxg1d ENSDARG00000070053 32 1 - 1.000 - - - - - - - forkhead box G1d [Source:ZFIN;Acc:ZDB-GENE-080305-12]
85. lars2 ENSDARG00000075337 31 1 - - - - - - 1.000 - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
86. zdhhc12b ENSDARG00000052787 43 1 - - - - - - 1.000 - - zinc finger, DHHC-type containing 12b [Source:ZFIN;Acc:ZDB-GENE-070705-356]
87. BPHL ENSDARG00000102877 28 1 - - - - - - 1.000 - - biphenyl hydrolase like [Source:ZFIN;Acc:ZDB-GENE-170623-2]
88. lzts1 ENSDARG00000075565 23 1 - 1.000 - - - - - - - leucine zipper, putative tumor suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-431]
89. wu:fb63a08 38 1 - - - - - - 1.000 - - wu:fb63a08
90. zgc:101731 ENSDARG00000040965 27 1 - - - - - - 1.000 - - zgc:101731 [Source:ZFIN;Acc:ZDB-GENE-040912-57]
91. SCAMP5 SCAMP5 19 1 - - - - - - 1.000 - -
92. BX537109.1 ENSDARG00000086015 2 1 - - - - - - - 1.000 -
93. tmem179b ENSDARG00000069495 17 1 - - - - - - 1.000 - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
94. BX470224.1 ENSDARG00000092793 22 1 - 1.000 - - - - - - -
95. si:dkey-21o19.2 ENSDARG00000088900 52 1 - - - - - - 1.000 - - si:dkey-21o19.2 [Source:ZFIN;Acc:ZDB-GENE-090313-241]
96. si:dkey-27c15.3 ENSDARG00000056847 37 1 - - - - - - 1.000 - - si:dkey-27c15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-728]
97. CT955987.1 CT955987.1 9 1 - 1.000 - - - - - - -
98. si:ch211-263m18.4 ENSDARG00000093353 27 1 - 1.000 - - - - - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
99. dnah1 ENSDARG00000100115 17 1 - 1.000 - - - - - - - dynein, axonemal, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-081015-3]
100. zmiz2 ENSDARG00000098683 1 1 - 1.000 - - - - - - - zinc finger, MIZ-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-285]

There are 895 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA