Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-213i16.3

Gene Name Gene ID Reads Annotation
si:ch211-213i16.3 2 si:ch211-213i16.3, transcript variant X1










Genes with expression patterns similar to si:ch211-213i16.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-213i16.3 2 3 1.000 - 1.000 - - - - - 1.000 si:ch211-213i16.3, transcript variant X1
2. KCNJ15 ENSDARG00000058988 18 2 1.000 - 1.000 - - - - - - potassium voltage-gated channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]
3. pla2g4a pla2g4a 7 2 1.000 - 1.000 - - - - - -
4. hs3st2 ENSDARG00000059616 2 2 - - 1.000 - - - - - 1.000 heparan sulfate (glucosamine) 3-O-sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070202-7]
5. pde4cb ENSDARG00000002411 63 1.776 0.893 - 0.883 - - - - - - phosphodiesterase 4C, cAMP-specific b [Source:ZFIN;Acc:ZDB-GENE-030131-4075]
6. ddhd2 ENSDARG00000076765 29 1.748 0.902 - 0.846 - - - - - - DDHD domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080519-4]
7. lpcat2 ENSDARG00000053010 137 1.681 0.959 - - - - - - - 0.722 lysophosphatidylcholine acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-229]
8. si:ch211-10m5.3 si:ch211-10m5.3 10 1.68 - - 0.821 - - - - - 0.859
9. ACTR3_1 ACTR3_1 2 1 - - 1.000 - - - - - -
10. EHD2 EHD2 23 1 1.000 - - - - - - - -
11. CR339051.1 CR339051.1 9 1 1.000 - - - - - - - -
12. si:dkey-22l1.1 ENSDARG00000096743 5 1 - - 1.000 - - - - - - si:dkey-22l1.1 [Source:ZFIN;Acc:ZDB-GENE-130603-74]
13. mir199-2 mir199-2 38 1 1.000 - - - - - - - -
14. MICALCL MICALCL 1 1 - - 1.000 - - - - - -
15. CT737138.1 CT737138.1 26 1 - - 1.000 - - - - - -
16. FP102169.1 ENSDARG00000110967 1 1 - - - - - - - - 1.000 secreted frizzled-related protein 5-like [Source:NCBI gene;Acc:101884738]
17. ACSL6 12 1 1.000 - - - - - - - - acyl-CoA synthetase long-chain family member 6
18. BX629350.1 BX629350.1 1 1 - - 1.000 - - - - - -
19. pls1 ENSDARG00000039272 39 1 - - 1.000 - - - - - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
20. U6_8 U6_8 6 1 1.000 - - - - - - - -
21. zgc:174224 ENSDARG00000093875 4 1 - - 1.000 - - - - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
22. KIF25 ENSDARG00000017532 1 1 - - - - - - - - 1.000 kinesin family member 25 [Source:ZFIN;Acc:ZDB-GENE-041001-167]
23. si:ch211-288g17.4 ENSDARG00000070960 0 1 - - - - - - - - 1.000 si:ch211-288g17.4 [Source:ZFIN;Acc:ZDB-GENE-060531-62]
24. ARAP1 3 1 1.000 - - - - - - - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
25. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 1.000 - - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
26. DHPS ENSDARG00000003270 85 1 1.000 - - - - - - - - deoxyhypusine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2001]
27. 5_8S_rRNA 5_8S_rRNA 24 1 - - - - - - - - 1.000
28. si:ch73-256j6.4 ENSDARG00000078519, ENSDARG00000093574 3 1 - - - - - - - - 1.000 si:ch73-256j6.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3779]
29. M1AP ENSDARG00000099485 1 1 - - - - - - - - 1.000 meiosis 1 associated protein [Source:ZFIN;Acc:ZDB-GENE-070410-19]
30. GABRA3 ENSDARG00000090883 5 1 - - - - - - - - 1.000 gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
31. XPO5 ENSDARG00000098868 3 1 - - - - - - - - 1.000 exportin 5 [Source:HGNC Symbol;Acc:HGNC:17675]
32. si:ch73-296e2.3 ENSDARG00000079769 0 1 - - - - - - - - 1.000 si:ch73-296e2.3 [Source:ZFIN;Acc:ZDB-GENE-100922-156]
33. rad9b ENSDARG00000075632 1 1 - - 1.000 - - - - - - RAD9 checkpoint clamp component B [Source:ZFIN;Acc:ZDB-GENE-040910-3]
34. CABZ01046996.1 ENSDARG00000111833 1 1 - - - - - - - - 1.000
35. BX323448.1 ENSDARG00000116236 10 1 - - - - - - - - 1.000
36. si:dkey-45h7.1 ENSDARG00000093618 1 1 - - - - - - - - 1.000 si:dkey-45h7.1 [Source:ZFIN;Acc:ZDB-GENE-050420-369]
37. DOK2 ENSDARG00000075818 8 1 1.000 - - - - - - - - docking protein 2 [Source:ZFIN;Acc:ZDB-GENE-080721-4]
38. abhd12 ENSDARG00000071004 47 1 1.000 - - - - - - - - abhydrolase domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-060929-268]
39. galr1 galr1 9 1 - - - - - - - - 1.000
40. AL935186.2 ENSDARG00000097345 6 1 - - 1.000 - - - - - -
41. AP1S3 AP1S3 8 1 1.000 - - - - - - - -
42. si:ch211-149o7.4 si:ch211-149o7.4 1 1 - - 1.000 - - - - - -
43. si:dkey-13d5.1 si:dkey-13d5.1 3 1 1.000 - - - - - - - -
44. KLF10 1 1 - - 1.000 - - - - - - Kruppel-like factor 10
45. si:ch211-119d14.3 ENSDARG00000075332 12 1 - - - - - - - - 1.000 si:ch211-119d14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-100]
46. twsg1b 7 1 1.000 - - - - - - - - twisted gastrulation BMP signaling modulator 1b
47. si:ch211-202h22.7 ENSDARG00000073912 18 1 1.000 - - - - - - - - si:ch211-202h22.7 [Source:ZFIN;Acc:ZDB-GENE-090313-77]
48. abcd1 ENSDARG00000074876 6 1 - - - - - - - - 1.000 ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
49. si:ch211-201b11.3 si:ch211-201b11.3 2 1 - - - - - - - - 1.000
50. si:ch211-195i24.1 si:ch211-195i24.1 10 1 - - 1.000 - - - - - -
51. CDC42EP1 CDC42EP1 50 1 1.000 - - - - - - - -
52. CR354426.1 CR354426.1 25 1 1.000 - - - - - - - -
53. si:dkeyp-67e1.6 ENSDARG00000073947, ENSDARG00000113513, ENSDARG00000113783 20 1 1.000 - - - - - - - - si:dkeyp-67e1.6 [Source:ZFIN;Acc:ZDB-GENE-061207-87]
54. si:ch211-117m20.4 ENSDARG00000094286 7 1 - - - - - - - - 1.000 si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
55. khk ENSDARG00000029874 43 1 - - 1.000 - - - - - - ketohexokinase [Source:ZFIN;Acc:ZDB-GENE-040718-381]
56. BX897747.2 BX897747.2 1 1 - - 1.000 - - - - - -
57. kcnq1 ENSDARG00000059798 11 1 - - 1.000 - - - - - - potassium voltage-gated channel, KQT-like subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-061214-5]
58. egln3 ENSDARG00000032553 280 1 1.000 - - - - - - - - egl-9 family hypoxia-inducible factor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2541]
59. rtn4rl2b ENSDARG00000037495 11 1 1.000 - - - - - - - - reticulon 4 receptor-like 2b [Source:ZFIN;Acc:ZDB-GENE-040310-2]
60. CDKN2B CDKN2B 5 1 1.000 - - - - - - - -
61. crygm2f ENSDARG00000078134, ENSDARG00000112285 2 1 - - - - - - - - 1.000 crystallin, gamma M2f [Source:ZFIN;Acc:ZDB-GENE-080220-17]
62. si:dkeyp-51f12.3 ENSDARG00000091904 1 1 - - - - - - - - 1.000 si:dkeyp-51f12.3 [Source:ZFIN;Acc:ZDB-GENE-070705-547]
63. si:rp71-1k13.6 ENSDARG00000115843 0 1 - - - - - - - - 1.000 si:rp71-1k13.6 [Source:ZFIN;Acc:ZDB-GENE-090312-52]
64. 5_8S_rRNA_3 5_8S_rRNA_3 2 1 - - 1.000 - - - - - -
65. sybu ENSDARG00000060112 22 1 - - 1.000 - - - - - - syntabulin (syntaxin-interacting) [Source:ZFIN;Acc:ZDB-GENE-060929-1202]
66. CABZ01111936.1 CABZ01111936.1 1 1 - - 1.000 - - - - - -
67. wu:fb63c12 26 1 1.000 - - - - - - - - wu:fb63c12
68. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - - - - - - - - 1.000
69. si:dkeyp-104b3.21 ENSDARG00000103964 6 1 - - - - - - - - 1.000 si:dkeyp-104b3.21 [Source:ZFIN;Acc:ZDB-GENE-070912-626]
70. CABZ01073069.1 CABZ01073069.1 5 1 - - 1.000 - - - - - -
71. opn1lw1 ENSDARG00000044862, ENSDARG00000115464 0 1 - - - - - - - - 1.000 opsin 1 (cone pigments), long-wave-sensitive, 1 [Source:ZFIN;Acc:ZDB-GENE-990604-41]
72. si:ch211-274k16.6 si:ch211-274k16.6 26 1 - - - - - - - - 1.000
73. zgc:193682 zgc:193682 15 1 1.000 - - - - - - - -
74. sult1st2 ENSDARG00000041540 1 1 - - 1.000 - - - - - - sulfotransferase family 1, cytosolic sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030804-27]
75. ITIH4 ITIH4 9 1 - - 1.000 - - - - - -
76. CR524823.2 CR524823.2 0 1 - - - - - - - - 1.000
77. spp1 ENSDARG00000044276 34 1 1.000 - - - - - - - - secreted phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-050706-97]
78. OSCP1 ENSDARG00000101888 59 1 1.000 - - - - - - - - organic solute carrier partner 1 [Source:HGNC Symbol;Acc:HGNC:29971]
79. ZACN ZACN 502 1 1.000 - - - - - - - -
80. cnnm1 1 1 - - - - - - - - 1.000 cyclin and CBS domain divalent metal cation transport mediator 1, transcript variant X3
81. cobl ENSDARG00000091006 4 1 - - - - - - - - 1.000 cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
82. cdh23 ENSDARG00000007561, ENSDARG00000094454 3 1 1.000 - - - - - - - - cadherin-related 23 [Source:ZFIN;Acc:ZDB-GENE-040513-7]
83. CR735107.1 CR735107.1 6 1 - - 1.000 - - - - - -
84. bmpr1ab ENSDARG00000105045 2 1 - - 1.000 - - - - - - bone morphogenetic protein receptor, type IAb [Source:ZFIN;Acc:ZDB-GENE-040912-150]
85. fgf21 ENSDARG00000100846 19 1 - - 1.000 - - - - - - fibroblast growth factor 21 [Source:ZFIN;Acc:ZDB-GENE-060623-2]
86. si:rp71-26b20.1 si:rp71-26b20.1 11 1 1.000 - - - - - - - -
87. PHYH ENSDARG00000086740 15 1 - - 1.000 - - - - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
88. rnf126 ENSDARG00000104076 1 1 - - 1.000 - - - - - - ring finger protein 126 [Source:ZFIN;Acc:ZDB-GENE-070209-292]
89. foxe1 ENSDARG00000079266 6 1 1.000 - - - - - - - - forkhead box E1 [Source:ZFIN;Acc:ZDB-GENE-061116-1]
90. BX004785.2 ENSDARG00000093487 10 1 - - 1.000 - - - - - -
91. wnt7ba ENSDARG00000022858 1 1 - - - - - - - - 1.000 wingless-type MMTV integration site family, member 7Ba [Source:ZFIN;Acc:ZDB-GENE-041210-178]
92. CLDN10 CLDN10 38 1 1.000 - - - - - - - -
93. WDR70_1 ENSDARG00000109022 0 1 - - - - - - - - 1.000 WD repeat domain 70 [Source:HGNC Symbol;Acc:HGNC:25495]
94. si:ch211-76m11.15 ENSDARG00000098979 6 1 - - - - - - - - 1.000 si:ch211-76m11.15 [Source:ZFIN;Acc:ZDB-GENE-110411-136]
95. PPAPDC3 PPAPDC3 14 1 - - - - - - - - 1.000
96. CKMT2 CKMT2 10 1 1.000 - - - - - - - -
97. si:ch73-340m8.2 ENSDARG00000040258 2 1 - - 1.000 - - - - - - si:ch73-340m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-209]
98. AL929134.2 AL929134.2 5 1 - - - - - - - - 1.000
99. ccr7 ENSDARG00000044561 2 1 - - - - - - - - 1.000 chemokine (C-C motif) receptor 7 [Source:ZFIN;Acc:ZDB-GENE-060522-2]
100. PEG3_13 PEG3_13 5 1 - - - - - - - - 1.000

There are 441 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA