Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-213a13.1

Gene Name Gene ID Reads Annotation
si:ch211-213a13.1 ENSDARG00000090600 381 si:ch211-213a13.1 [Source:ZFIN;Acc:ZDB-GENE-050208-471]










Genes with expression patterns similar to si:ch211-213a13.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-213a13.1 ENSDARG00000090600 381 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-213a13.1 [Source:ZFIN;Acc:ZDB-GENE-050208-471]
2. gabpb2a ENSDARG00000007943 1570 2.411 - - - 0.700 - 0.922 0.789 - - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
3. BX323449.2 BX323449.2 50 1.877 - - - 0.945 - 0.932 - - -
4. dtnbb ENSDARG00000013020 280 1.813 - - - 0.916 - 0.897 - - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
5. LRFN2 118 1.813 - - - 0.936 - 0.877 - - - leucine rich repeat and fibronectin type III domain containing 2
6. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 1.773 - - - 0.893 - 0.880 - - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
7. si:dkey-258p11.2 si:dkey-258p11.2 171 1.765 0.861 - - - - 0.904 - - -
8. PKN1 PKN1 42 1.756 0.826 - - - - 0.930 - - -
9. sacs ENSDARG00000091042 314 1.753 - - - 0.866 - 0.887 - - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
10. zhx2 zhx2 365 1.743 - - - 0.867 - 0.876 - - -
11. cacng6a ENSDARG00000036457 344 1.738 0.845 - - 0.893 - - - - - calcium channel, voltage-dependent, gamma subunit 6a [Source:ZFIN;Acc:ZDB-GENE-060503-440]
12. slc22a2 ENSDARG00000030530 313 1.732 - - - 0.839 - 0.893 - - - solute carrier family 22 (organic cation transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2167]
13. st8sia5 ENSDARG00000036584 529 1.731 - - - 0.865 - 0.866 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
14. palm1b ENSDARG00000007818 2128 1.681 - - - - - 0.954 0.727 - - paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
15. si:ch211-215p11.4 si:ch211-215p11.4 67 1.679 0.781 - - - - 0.898 - - -
16. pmepa1 ENSDARG00000039325 652 1.676 0.805 - - - - 0.871 - - - prostate transmembrane protein, androgen induced 1 [Source:ZFIN;Acc:ZDB-GENE-040718-320]
17. MAP3K6 MAP3K6 181 1.665 - - - 0.946 - 0.719 - - -
18. si:dkey-263m6.1 si:dkey-263m6.1 140 1.66 0.750 - - 0.910 - - - - -
19. PEG3_40 PEG3_40 186 1.659 0.723 - - - - 0.936 - - -
20. cplx4c ENSDARG00000094889 253 1.652 - - - 0.850 - 0.802 - - - complexin 4c [Source:ZFIN;Acc:ZDB-GENE-101018-1]
21. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1.637 - - - 0.864 - 0.773 - - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
22. mtx1a ENSDARG00000025500 275 1.632 - - - 0.860 - 0.772 - - - metaxin 1a [Source:ZFIN;Acc:ZDB-GENE-060606-2]
23. memo1 ENSDARG00000010823 1681 1.63 0.702 - - - - 0.928 - - - mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
24. ptges ENSDARG00000020136, ENSDARG00000115727 747 1.623 - - - 0.725 - 0.898 - - - prostaglandin E synthase [Source:ZFIN;Acc:ZDB-GENE-050407-2]
25. calhm2 ENSDARG00000039482 138 1.621 0.849 - - - - 0.772 - - - calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
26. man1a1 ENSDARG00000005652 877 1.615 - - - 0.840 - 0.775 - - - mannosidase, alpha, class 1A, member 1 [Source:ZFIN;Acc:ZDB-GENE-041014-321]
27. srcap ENSDARG00000005236 1740 1.601 - - - - - 0.811 0.790 - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
28. SMIM20 ENSDARG00000112670 423 1.598 - - - - - 0.842 0.756 - - small integral membrane protein 20 [Source:ZFIN;Acc:ZDB-GENE-131002-2]
29. BDP1_1 BDP1_1 317 1.582 - - - - - 0.849 0.733 - -
30. si:dkey-33c12.3 ENSDARG00000057881, ENSDARG00000110707 394 1.58 0.812 - - - - 0.768 - - - si:dkey-33c12.3 [Source:ZFIN;Acc:ZDB-GENE-030131-7320]
31. fam129aa ENSDARG00000042055 222 1.554 0.803 - - - - 0.751 - - - family with sequence similarity 129, member Aa [Source:ZFIN;Acc:ZDB-GENE-041014-181]
32. si:ch211-92l17.1 ENSDARG00000094584 18 1.541 0.826 - - - - - 0.715 - - si:ch211-92l17.1 [Source:ZFIN;Acc:ZDB-GENE-041210-113]
33. ppp1r15a ENSDARG00000069135 871 1.539 - - - - - 0.838 0.701 - - protein phosphatase 1, regulatory subunit 15A [Source:ZFIN;Acc:ZDB-GENE-030131-4408]
34. bscl2 ENSDARG00000037008 429 1.527 - 0.718 - - - 0.809 - - - Berardinelli-Seip congenital lipodystrophy 2 (seipin) [Source:ZFIN;Acc:ZDB-GENE-051113-140]
35. wdr48 wdr48 383 1.512 - 0.787 - - - 0.725 - - -
36. abl2 ENSDARG00000013841 145 1.509 0.771 - - - - - 0.738 - - c-abl oncogene 2, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020809-2]
37. tfe3a ENSDARG00000098903 1530 1.487 0.708 - - - - 0.779 - - - transcription factor binding to IGHM enhancer 3a [Source:ZFIN;Acc:ZDB-GENE-010919-2]
38. KIF26A KIF26A 1077 1.483 0.732 - - - - 0.751 - - -
39. cnpy4 ENSDARG00000055797, ENSDARG00000114769 363 1.483 0.728 - - 0.755 - - - - - canopy FGF signaling regulator 4 [Source:ZFIN;Acc:ZDB-GENE-060315-5]
40. si:ch73-55c23.2 si:ch73-55c23.2 105 1.481 0.761 - - - - 0.720 - - -
41. SMC6 ENSDARG00000091821 165 1.476 0.704 - - - - 0.772 - - - structural maintenance of chromosomes 6 [Source:ZFIN;Acc:ZDB-GENE-110303-1]
42. CR848664.2 CR848664.2 876 1.475 - 0.721 - - - 0.754 - - -
43. mkrn4 ENSDARG00000028295 2768 1.468 - - - - - 0.728 0.740 - - makorin, ring finger protein, 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5954]
44. PIGB ENSDARG00000105011 277 1.464 - - - - - 0.705 0.759 - - phosphatidylinositol glycan anchor biosynthesis, class B [Source:ZFIN;Acc:ZDB-GENE-040426-1216]
45. mppe1 ENSDARG00000045416 340 1.449 - - - - - 0.733 0.716 - - metallophosphoesterase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-195]
46. zdhhc14 ENSDARG00000037069 479 1.446 - 0.704 - - - 0.742 - - - zinc finger, DHHC-type containing 14 [Source:ZFIN;Acc:ZDB-GENE-040724-21]
47. CAPN15 ENSDARG00000060600 248 1.441 0.719 - - - - 0.722 - - - calpain 15 [Source:ZFIN;Acc:ZDB-GENE-140106-70]
48. txnl4b ENSDARG00000058962 296 1.436 - - - - - 0.706 0.730 - - thioredoxin-like 4B [Source:ZFIN;Acc:ZDB-GENE-051030-63]
49. zgc:158343 ENSDARG00000099411, ENSDARG00000110524, ENSDARG00000110558, ENSDARG00000112808 1061 1.418 0.702 - - - - 0.716 - - - zgc:158343 [Source:ZFIN;Acc:ZDB-GENE-061201-9]
50. cables1 ENSDARG00000099395 361 1.411 - - - - - 0.706 0.705 - - Cdk5 and Abl enzyme substrate 1 [Source:ZFIN;Acc:ZDB-GENE-070912-509]
51. fignl1 ENSDARG00000016427 636 0.955 - - - - - 0.955 - - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
52. slc30a10 ENSDARG00000103983 46 0.953 - - - - - 0.953 - - - solute carrier family 30, member 10 [Source:ZFIN;Acc:ZDB-GENE-060608-2]
53. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 0.951 - - - - - 0.951 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
54. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 0.951 - - - - - 0.951 - - - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
55. MIS12 ENSDARG00000026454 649 0.951 - - - - - 0.951 - - - MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-040426-1372]
56. arf3a ENSDARG00000070539 29 0.949 - - - - - 0.949 - - - ADP-ribosylation factor 3a [Source:ZFIN;Acc:ZDB-GENE-040801-176]
57. slc8a4a ENSDARG00000055154 90 0.949 - - - - - 0.949 - - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
58. GRIN2B GRIN2B 140 0.949 - - - - - 0.949 - - -
59. SLC39A8 ENSDARG00000056757 52 0.948 - - - 0.948 - - - - - solute carrier family 39 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-050419-124]
60. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 0.948 - - - - - 0.948 - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
61. ENSDARG00000086878 ENSDARG00000086878 332 0.947 - - - - - 0.947 - - -
62. TRPC4_1 TRPC4_1 212 0.947 - - - - - 0.947 - - -
63. dpysl4 ENSDARG00000103490 534 0.947 - - - - - 0.947 - - - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
64. si:dkey-22o22.2 ENSDARG00000102445 149 0.946 - - - - - 0.946 - - - si:dkey-22o22.2 [Source:ZFIN;Acc:ZDB-GENE-100922-84]
65. CNTNAP1 ENSDARG00000074524 73 0.946 - - - - - 0.946 - - - contactin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030916-2]
66. zgc:153345 ENSDARG00000055622 29 0.946 - - - 0.946 - - - - - zgc:153345 [Source:ZFIN;Acc:ZDB-GENE-061103-487]
67. htr3a ENSDARG00000089212 51 0.945 - - - - - 0.945 - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
68. BX470254.1_1 ENSDARG00000097402 50 0.945 - - - - - 0.945 - - -
69. rassf2b ENSDARG00000044044, ENSDARG00000110241 26 0.945 - - - 0.945 - - - - - Ras association (RalGDS/AF-6) domain family member 2b [Source:ZFIN;Acc:ZDB-GENE-041221-6]
70. TRPM6 ENSDARG00000103454 15 0.945 - - - 0.945 - - - - - transient receptor potential cation channel, subfamily M, member 6 [Source:ZFIN;Acc:ZDB-GENE-111212-1]
71. strn4 ENSDARG00000102902 24 0.945 - - - 0.945 - - - - - striatin, calmodulin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-070501-3]
72. opn4.1 ENSDARG00000007553 66 0.944 - - - - - 0.944 - - - opsin 4.1 [Source:ZFIN;Acc:ZDB-GENE-030314-2]
73. LMLN ENSDARG00000061265 1618 0.944 - - - - - 0.944 - - - leishmanolysin-like (metallopeptidase M8 family) [Source:ZFIN;Acc:ZDB-GENE-081104-298]
74. PARM1 ENSDARG00000114063 58 0.944 - - - - - 0.944 - - - prostate androgen-regulated mucin-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-262]
75. si:dkey-51d8.11 8 0.943 - - - - - 0.943 - - - si:dkey-51d8.11, transcript variant X6
76. ADORA1 ADORA1 8 0.943 - - - - - 0.943 - - -
77. mir124-3 26 0.943 - - - - - 0.943 - - - microRNA 124-3
78. grik4 ENSDARG00000026753 22 0.943 - - - - - 0.943 - - - glutamate receptor, ionotropic, kainate 4 [Source:ZFIN;Acc:ZDB-GENE-070821-5]
79. BX004890.2 BX004890.2 84 0.943 - - - - - 0.943 - - -
80. kctd1 ENSDARG00000074056 652 0.943 - - - - - 0.943 - - - potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]
81. KCNJ3_1 KCNJ3_1 30 0.943 - - - - - 0.943 - - -
82. fam151a ENSDARG00000058218 40 0.943 - - - 0.943 - - - - - family with sequence similarity 151, member A [Source:ZFIN;Acc:ZDB-GENE-070705-105]
83. XKR7 ENSDARG00000026333 175 0.943 - - - - - 0.943 - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
84. sgms2 57 0.942 - - - - - 0.942 - - - sphingomyelin synthase 2, transcript variant X1
85. irgf1 ENSDARG00000070774 7 0.942 - - - - - 0.942 - - - immunity-related GTPase family, f1 [Source:ZFIN;Acc:ZDB-GENE-051212-5]
86. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 0.942 - - - - - 0.942 - - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
87. CABZ01079192.1 ENSDARG00000101629 23 0.942 - - - - - 0.942 - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
88. retsatl ENSDARG00000034989 41 0.942 - - - - - 0.942 - - - retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
89. zgc:73349 zgc:73349 4 0.942 - - - - - 0.942 - - -
90. sdr42e1 ENSDARG00000098838 25 0.942 - - - - - 0.942 - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
91. DLK1 60 0.942 - - - - - 0.942 - - - delta like non-canonical Notch ligand 1
92. U1_55 U1_55 4 0.942 - - - - - 0.942 - - -
93. pdk2 pdk2 32 0.942 - - - - - 0.942 - - -
94. fer ENSDARG00000012196 83 0.942 - - - 0.942 - - - - - fer (fps/fes related) tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-060526-234]
95. BX649494.1 BX649494.1 195 0.942 - - - - - 0.942 - - -
96. ftr03 8 0.942 - - - - - 0.942 - - - finTRIM family, member 3
97. si:dkey-192k22.2 ENSDARG00000095111 4 0.942 - - - - - 0.942 - - - si:dkey-192k22.2 [Source:ZFIN;Acc:ZDB-GENE-090313-219]
98. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 0.942 - - - - - 0.942 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
99. pcdh2g6 9 0.942 - - - - - 0.942 - - - protocadherin 2 gamma 6
100. slc35a5 ENSDARG00000000001 17 0.942 - - - - - 0.942 - - - solute carrier family 35, member A5 [Source:ZFIN;Acc:ZDB-GENE-030616-55]

There are 1593 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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