Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-212o1.2

Gene Name Gene ID Reads Annotation
si:ch211-212o1.2 ENSDARG00000011498, ENSDARG00000110768 378 si:ch211-212o1.2 [Source:ZFIN;Acc:ZDB-GENE-041111-310]










Genes with expression patterns similar to si:ch211-212o1.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-212o1.2 ENSDARG00000011498, ENSDARG00000110768 378 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-212o1.2 [Source:ZFIN;Acc:ZDB-GENE-041111-310]
2. etv4 ENSDARG00000018303, ENSDARG00000115855 3889 1.656 - 0.838 - - - - 0.818 - - ets variant 4 [Source:ZFIN;Acc:ZDB-GENE-990415-71]
3. b3gnt5a ENSDARG00000018971 938 1.608 - 0.780 - - - - 0.828 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-030131-8470]
4. si:rp71-1i20.2 ENSDARG00000043198 113 1.608 - 0.901 - - - - - 0.707 - si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
5. kcnh6 kcnh6 59 1.584 - 0.838 - 0.746 - - - - -
6. rft1 ENSDARG00000060398 146 1.584 0.730 0.854 - - - - - - - RFT1 homolog [Source:ZFIN;Acc:ZDB-GENE-110411-126]
7. dlc ENSDARG00000002336, ENSDARG00000116332 578 1.584 - 0.837 - - - - 0.747 - - deltaC [Source:ZFIN;Acc:ZDB-GENE-000125-4]
8. SLC27A2 SLC27A2 436 1.577 0.806 - - - - - - 0.771 -
9. CDKN2AIP ENSDARG00000035853 341 1.519 0.727 0.792 - - - - - - - CDKN2A interacting protein [Source:ZFIN;Acc:ZDB-GENE-041010-188]
10. zgc:63972 ENSDARG00000054288, ENSDARG00000112978 78 1.51 - 0.722 - - - - - 0.788 - zgc:63972 [Source:ZFIN;Acc:ZDB-GENE-040426-1320]
11. CABZ01086801.1 CABZ01086801.1 41 1.503 0.717 - - - - - - 0.786 -
12. MAN1A2 ENSDARG00000041728 359 1.49 - - - - - - 0.744 0.746 - mannosidase, alpha, class 1A, member 2 [Source:ZFIN;Acc:ZDB-GENE-070912-390]
13. traf6 ENSDARG00000028058 478 1.48 - 0.752 - 0.728 - - - - - TNF receptor-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5735]
14. CT956064.5 CT956064.5 619 1.438 - - - 0.705 - - 0.733 - -
15. si:ch211-117c9.5 ENSDARG00000071235 154 1.432 - 0.708 - - - - - 0.724 - si:ch211-117c9.5 [Source:ZFIN;Acc:ZDB-GENE-110408-2]
16. ca9 ENSDARG00000102300 193 0.931 - 0.931 - - - - - - - carbonic anhydrase IX [Source:ZFIN;Acc:ZDB-GENE-080818-5]
17. irgf3 ENSDARG00000062820 20 0.931 - 0.931 - - - - - - - immunity-related GTPase family, f3 [Source:ZFIN;Acc:ZDB-GENE-051212-6]
18. slc27a1b ENSDARG00000038352, ENSDARG00000104949 298 0.928 0.928 - - - - - - - - solute carrier family 27 (fatty acid transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-061013-672]
19. pibf1 ENSDARG00000013006, ENSDARG00000015506 151 0.921 - 0.921 - - - - - - - progesterone immunomodulatory binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-94]
20. rassf10a 417 0.919 - 0.919 - - - - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
21. rit1 ENSDARG00000069150 520 0.916 - 0.916 - - - - - - - Ras-like without CAAX 1 [Source:ZFIN;Acc:ZDB-GENE-070912-329]
22. actr10 ENSDARG00000038432 1598 0.913 - 0.913 - - - - - - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
23. si:ch211-208f21.2 ENSDARG00000094177 61 0.909 - 0.909 - - - - - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
24. RNF157 ENSDARG00000057481 215 0.909 - 0.909 - - - - - - - ring finger protein 157 [Source:HGNC Symbol;Acc:HGNC:29402]
25. zdhhc16b ENSDARG00000015989 193 0.907 - 0.907 - - - - - - - zinc finger, DHHC-type containing 16b [Source:ZFIN;Acc:ZDB-GENE-040426-1301]
26. lonp2 ENSDARG00000101438 179 0.904 - 0.904 - - - - - - - lon peptidase 2, peroxisomal [Source:ZFIN;Acc:ZDB-GENE-041212-1]
27. BX548021.2_1 BX548021.2_1 164 0.903 - 0.903 - - - - - - -
28. MYO5C ENSDARG00000104235 1285 0.901 - 0.901 - - - - - - - myosin VC [Source:ZFIN;Acc:ZDB-GENE-131127-196]
29. ZACN ZACN 502 0.901 - 0.901 - - - - - - -
30. ppp1r14ab ENSDARG00000017710, ENSDARG00000110779 3296 0.898 - 0.898 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1783]
31. si:dkey-182g1.2 ENSDARG00000052680, ENSDARG00000109368 147 0.897 - 0.897 - - - - - - - si:dkey-182g1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-619]
32. MYO9B ENSDARG00000078313 97 0.896 - 0.896 - - - - - - - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
33. si:ch211-253p2.2 ENSDARG00000071772 64 0.896 - 0.896 - - - - - - - si:ch211-253p2.2 [Source:ZFIN;Acc:ZDB-GENE-041111-272]
34. BX119916.1 BX119916.1 19 0.893 - 0.893 - - - - - - -
35. DGKE ENSDARG00000104793, ENSDARG00000113394, ENSDARG00000114662 45 0.892 - 0.892 - - - - - - - diacylglycerol kinase, epsilon [Source:ZFIN;Acc:ZDB-GENE-090512-7]
36. tmem176l.2 ENSDARG00000089399 22 0.892 - 0.892 - - - - - - - transmembrane protein 176l.2 [Source:ZFIN;Acc:ZDB-GENE-080829-12]
37. PLEKHA2 PLEKHA2 43 0.888 - 0.888 - - - - - - -
38. acot7 ENSDARG00000018653 693 0.888 - 0.888 - - - - - - - acyl-CoA thioesterase 7 [Source:ZFIN;Acc:ZDB-GENE-040912-42]
39. CCL19_1 CCL19_1 40 0.888 - 0.888 - - - - - - -
40. SUOX ENSDARG00000091574 122 0.888 - 0.888 - - - - - - - sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3]
41. mavs ENSDARG00000069733 311 0.886 - 0.886 - - - - - - - mitochondrial antiviral signaling protein [Source:ZFIN;Acc:ZDB-GENE-070112-1402]
42. zgc:153738 ENSDARG00000069230 84 0.883 - 0.883 - - - - - - - zgc:153738 [Source:ZFIN;Acc:ZDB-GENE-061013-622]
43. zgc:158343 ENSDARG00000099411, ENSDARG00000110524, ENSDARG00000110558, ENSDARG00000112808 1061 0.883 - 0.883 - - - - - - - zgc:158343 [Source:ZFIN;Acc:ZDB-GENE-061201-9]
44. tmem120a ENSDARG00000030914 273 0.881 - - - 0.881 - - - - - transmembrane protein 120A [Source:ZFIN;Acc:ZDB-GENE-070424-21]
45. CU929089.1 CU929089.1 479 0.878 - 0.878 - - - - - - -
46. PRKDC ENSDARG00000075083 693 0.877 - 0.877 - - - - - - - protein kinase, DNA-activated, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-9008]
47. ago4 ENSDARG00000100854 496 0.876 - 0.876 - - - - - - - argonaute RISC catalytic component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5357]
48. gucy1a3 89 0.876 - 0.876 - - - - - - - guanylate cyclase 1, soluble, alpha 3
49. CR388015.1 CR388015.1 311 0.875 - 0.875 - - - - - - -
50. ACTN4 ENSDARG00000099786 25 0.874 - 0.874 - - - - - - - actinin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-030131-940]
51. polr3glb ENSDARG00000013734 1199 0.874 - 0.874 - - - - - - - polymerase (RNA) III (DNA directed) polypeptide G like b [Source:ZFIN;Acc:ZDB-GENE-041010-32]
52. grhl2b ENSDARG00000061974 779 0.872 - 0.872 - - - - - - - grainyhead-like transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-060503-719]
53. si:dkey-20i20.2 ENSDARG00000071719 659 0.871 - 0.871 - - - - - - - si:dkey-20i20.2 [Source:ZFIN;Acc:ZDB-GENE-060503-528]
54. plcd3a ENSDARG00000052957 467 0.87 - 0.870 - - - - - - - phospholipase C, delta 3a [Source:ZFIN;Acc:ZDB-GENE-070620-1]
55. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 0.869 - 0.869 - - - - - - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
56. tnfaip8l3 ENSDARG00000088709 345 0.869 - 0.869 - - - - - - - tumor necrosis factor, alpha-induced protein 8-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1313]
57. osgn1 ENSDARG00000052279 5607 0.867 - 0.867 - - - - - - - oxidative stress induced growth inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-864]
58. CABZ01085085.1 CABZ01085085.1 123 0.865 0.865 - - - - - - - -
59. si:dkey-49m19.5 si:dkey-49m19.5 85 0.864 - 0.864 - - - - - - -
60. skap2 ENSDARG00000000906 146 0.861 - 0.861 - - - - - - - src kinase associated phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-438]
61. col7a1l ENSDARG00000069692 44 0.86 - 0.860 - - - - - - - collagen type VII alpha 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9861]
62. srek1ip1 ENSDARG00000043728 985 0.859 - 0.859 - - - - - - - SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
63. MSR1 MSR1 449 0.857 0.857 - - - - - - - -
64. tarbp2 ENSDARG00000070471 1946 0.857 - - - - - - 0.857 - - TAR (HIV) RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8085]
65. SLC46A3 ENSDARG00000077313 162 0.856 - 0.856 - - - - - - - solute carrier family 46, member 3 [Source:ZFIN;Acc:ZDB-GENE-100105-2]
66. upb1 ENSDARG00000011521, ENSDARG00000116790 920 0.856 - 0.856 - - - - - - - ureidopropionase, beta [Source:ZFIN;Acc:ZDB-GENE-030131-1380]
67. sytl2 sytl2 259 0.856 - 0.856 - - - - - - -
68. ZBTB41 ENSDARG00000054984 464 0.856 - 0.856 - - - - - - - zinc finger and BTB domain containing 41 [Source:ZFIN;Acc:ZDB-GENE-130530-649]
69. vamp4 ENSDARG00000043510 595 0.855 - 0.855 - - - - - - - vesicle-associated membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-92]
70. gng12a ENSDARG00000003375 1250 0.855 - 0.855 - - - - - - - guanine nucleotide binding protein (G protein), gamma 12a [Source:ZFIN;Acc:ZDB-GENE-040426-2555]
71. C19H1orf51 C19H1orf51 1776 0.85 - 0.850 - - - - - - -
72. sfrp1b ENSDARG00000057678, ENSDARG00000115373 95 0.849 0.849 - - - - - - - - secreted frizzled-related protein 1b [Source:ZFIN;Acc:ZDB-GENE-061103-1]
73. rab3ip ENSDARG00000101908 556 0.849 - 0.849 - - - - - - - RAB3A interacting protein (rabin3) [Source:ZFIN;Acc:ZDB-GENE-050522-323]
74. eif3jb ENSDARG00000053370 1776 0.848 - - - - - - 0.848 - - eukaryotic translation initiation factor 3, subunit Jb [Source:ZFIN;Acc:ZDB-GENE-040426-2900]
75. si:dkey-10p5.10 ENSDARG00000099307 371 0.846 - - - 0.846 - - - - - si:dkey-10p5.10 [Source:ZFIN;Acc:ZDB-GENE-120215-130]
76. ZNF135_5 ZNF135_5 73 0.845 - 0.845 - - - - - - -
77. pcmtd2 ENSDARG00000053820, ENSDARG00000113456 59 0.845 - 0.845 - - - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
78. si:dkey-229d2.7 ENSDARG00000092460 15 0.844 - 0.844 - - - - - - - si:dkey-229d2.7 [Source:ZFIN;Acc:ZDB-GENE-060526-265]
79. BX855614.1 ENSDARG00000094551 1294 0.844 - 0.844 - - - - - - - si:dkey-262g12.9 [Source:NCBI gene;Acc:555910]
80. efcab1 ENSDARG00000061377 234 0.843 - 0.843 - - - - - - - EF-hand calcium binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-040914-40]
81. depdc5 ENSDARG00000078105 745 0.843 0.843 - - - - - - - - DEP domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-091204-356]
82. BX470211.1 ENSDARG00000105629 111 0.842 0.842 - - - - - - - -
83. si:dkey-162h11.3 41 0.842 0.842 - - - - - - - - si:dkey-162h11.3, transcript variant X2
84. SMIM22 ENSDARG00000105068 246 0.842 - 0.842 - - - - - - - small integral membrane protein 22 [Source:HGNC Symbol;Acc:HGNC:48329]
85. elf3 ENSDARG00000077982 211 0.841 - 0.841 - - - - - - - E74-like factor 3 (ets domain transcription factor, epithelial-specific ) [Source:ZFIN;Acc:ZDB-GENE-030131-8760]
86. ubox5 ENSDARG00000058563 161 0.84 - 0.840 - - - - - - - U-box domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-110411-166]
87. ypel3 ENSDARG00000055510 1344 0.839 - 0.839 - - - - - - - yippee-like 3 [Source:ZFIN;Acc:ZDB-GENE-030516-4]
88. tbc1d32 ENSDARG00000041734 486 0.838 0.838 - - - - - - - - TBC1 domain family, member 32 [Source:ZFIN;Acc:ZDB-GENE-061106-5]
89. aacs ENSDARG00000012468 1138 0.838 - - - 0.838 - - - - - acetoacetyl-CoA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-903]
90. swap70a ENSDARG00000051819 115 0.837 - 0.837 - - - - - - - switching B cell complex subunit SWAP70a [Source:ZFIN;Acc:ZDB-GENE-040426-1182]
91. hoxd13a ENSDARG00000059256 1190 0.837 - 0.837 - - - - - - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
92. slc12a10.3 ENSDARG00000055253 127 0.836 - 0.836 - - - - - - - slc12a10.3 solute carrier family 12 (sodium/potassium/chloride transporters), member 10, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-060503-518]
93. CR932358.2 CR932358.2 15 0.836 - 0.836 - - - - - - -
94. frs2b ENSDARG00000037353 544 0.836 - 0.836 - - - - - - - fibroblast growth factor receptor substrate 2b [Source:ZFIN;Acc:ZDB-GENE-040718-406]
95. PLCL2 ENSDARG00000098826 596 0.836 - - - 0.836 - - - - - phospholipase C like 2 [Source:ZFIN;Acc:ZDB-GENE-120426-4]
96. zgc:64085 zgc:64085 955 0.835 - 0.835 - - - - - - -
97. gpx7 ENSDARG00000091511 3045 0.835 - - - - - - 0.835 - - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
98. ca4c ENSDARG00000044512 102 0.834 - 0.834 - - - - - - - carbonic anhydrase IV c [Source:ZFIN;Acc:ZDB-GENE-080815-6]
99. klhl41a ENSDARG00000068888 1034 0.833 - - - - - - 0.833 - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
100. rpz5 ENSDARG00000075718 1703 0.832 - 0.832 - - - - - - - rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]

There are 761 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA