Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-210m1.3

Gene Name Gene ID Reads Annotation
si:ch211-210m1.3 si:ch211-210m1.3 2










Genes with expression patterns similar to si:ch211-210m1.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-210m1.3 si:ch211-210m1.3 2 2 - - - 1.000 1.000 - - - -
2. grin2ab ENSDARG00000070543 31 1.64 - - - 0.715 0.925 - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b [Source:ZFIN;Acc:ZDB-GENE-070424-223]
3. nyx ENSDARG00000061791 2 1 - - - 1.000 - - - - - nyctalopin [Source:ZFIN;Acc:ZDB-GENE-061026-3]
4. C6H21orf58 C6H21orf58 14 1 - - - - 1.000 - - - -
5. FAM163A_1 ENSDARG00000093021 6 1 - - - - 1.000 - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
6. CRYGM4 ENSDARG00000008219 1 1 - - - 1.000 - - - - - crystallin, gamma M4 [Source:ZFIN;Acc:ZDB-GENE-120312-2]
7. si:dkey-234l24.4p si:dkey-234l24.4p 2 1 - - - - 1.000 - - - -
8. TMCC1_1 TMCC1_1 1 1 - - - 1.000 - - - - -
9. DMXL2 ENSDARG00000091293 3 1 - - - - 1.000 - - - - Dmx-like 2 [Source:ZFIN;Acc:ZDB-GENE-031007-6]
10. kcnf1b ENSDARG00000027285 2 1 - - - 1.000 - - - - - potassium voltage-gated channel, subfamily F, member 1b [Source:ZFIN;Acc:ZDB-GENE-090312-39]
11. tlr4bb ENSDARG00000022048, ENSDARG00000110914 2 1 - - - 1.000 - - - - - toll-like receptor 4b, duplicate b [Source:ZFIN;Acc:ZDB-GENE-040219-9]
12. KLHL38 KLHL38 15 1 - - - - 1.000 - - - -
13. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1 - - - 1.000 - - - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
14. ms4a17a.1 ENSDARG00000043798 7 1 - - - 1.000 - - - - - membrane-spanning 4-domains, subfamily A, member 17A.1 [Source:ZFIN;Acc:ZDB-GENE-050417-307]
15. BX901974.1 ENSDARG00000067592 2 1 - - - 1.000 - - - - -
16. si:ch211-276k2.2 4 1 - - - 1.000 - - - - - si:ch211-276k2.2
17. CT737190.1 ENSDARG00000091514 1 1 - - - 1.000 - - - - - si:dkey-286h2.5 [Source:NCBI gene;Acc:100536662]
18. si:ch211-81g2.1 si:ch211-81g2.1 5 1 - - - 1.000 - - - - -
19. si:ch211-224l10.5 si:ch211-224l10.5 1 1 - - - 1.000 - - - - -
20. cyp2aa12 ENSDARG00000102805 3 1 - - - - 1.000 - - - - cytochrome P450, family 2, subfamily AA, polypeptide 12 [Source:ZFIN;Acc:ZDB-GENE-071004-47]
21. PLCH2 PLCH2 3 1 - - - 1.000 - - - - -
22. trpc2 trpc2 10 1 - - - 1.000 - - - - -
23. tacr3a ENSDARG00000075112 1 1 - - - 1.000 - - - - - tachykinin receptor 3a [Source:ZFIN;Acc:ZDB-GENE-090312-106]
24. CUZD1 CUZD1 2 1 - - - 1.000 - - - - -
25. si:dkey-30f3.4 si:dkey-30f3.4 2 1 - - - - 1.000 - - - -
26. si:ch211-128b10.5 si:ch211-128b10.5 3 1 - - - 1.000 - - - - -
27. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - - 1.000 - - - - potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
28. si:ch211-278f21.5 si:ch211-278f21.5 1 1 - - - 1.000 - - - - -
29. irbp 2 1 - - - 1.000 - - - - - interphotoreceptor retinoid-binding protein, transcript variant X2
30. rfc4 ENSDARG00000042458 2 1 - - - 1.000 - - - - - replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]
31. si:dkey-101d6.4 si:dkey-101d6.4 6 1 - - - - 1.000 - - - -
32. bdkrb1 ENSDARG00000020744 4 1 - - - - 1.000 - - - - bradykinin receptor B1 [Source:ZFIN;Acc:ZDB-GENE-030814-1]
33. si:dkey-22i16.7 ENSDARG00000094910 47 1 - - - - 1.000 - - - - si:dkey-22i16.7 [Source:ZFIN;Acc:ZDB-GENE-090313-259]
34. slc5a5 ENSDARG00000005392 6 1 - - - 1.000 - - - - - solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
35. gucy2f ENSDARG00000025504 6 1 - - - 1.000 - - - - - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
36. mhc1zca ENSDARG00000069471 21 1 - - - - 1.000 - - - - major histocompatibility complex class I ZCA [Source:ZFIN;Acc:ZDB-GENE-070424-4]
37. CABZ01051288.2 CABZ01051288.2 2 1 - - - - 1.000 - - - -
38. si:dkey-4m13.3 6 1 - - - 1.000 - - - - - si:dkey-4m13.3
39. CR318624.1 ENSDARG00000094618 5 1 - - - 1.000 - - - - -
40. MYO18B MYO18B 2 1 - - - - 1.000 - - - -
41. cdx1a ENSDARG00000114554 28 1 - - - 1.000 - - - - - caudal type homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050510-1]
42. si:dkey-254e13.13 si:dkey-254e13.13 6 1 - - - 1.000 - - - - -
43. zgc:162724 zgc:162724 9 1 - - - - 1.000 - - - -
44. CU367845.1_1 CU367845.1_1 43 1 - - - 1.000 - - - - -
45. ENSDARG00000054233 ENSDARG00000054233 4 0.994 - - - - 0.994 - - - -
46. si:dkey-24h22.5 ENSDARG00000094556 4 0.994 - - - - 0.994 - - - - si:dkey-24h22.5 [Source:ZFIN;Acc:ZDB-GENE-090313-274]
47. slc47a2.2 ENSDARG00000074136 3 0.994 - - - - 0.994 - - - - solute carrier family 47 (multidrug and toxin extrusion), member 2.2 [Source:ZFIN;Acc:ZDB-GENE-070615-14]
48. arf3a ENSDARG00000070539 29 0.993 - - - 0.993 - - - - - ADP-ribosylation factor 3a [Source:ZFIN;Acc:ZDB-GENE-040801-176]
49. si:dkey-233e3.1 si:dkey-233e3.1 7 0.993 - - - 0.993 - - - - -
50. TMEM136 TMEM136 13 0.992 - - - - 0.992 - - - -
51. si:ch211-267j24.2 si:ch211-267j24.2 7 0.992 - - - - 0.992 - - - -
52. si:dkey-199m13.9 si:dkey-199m13.9 20 0.986 - - - - 0.986 - - - -
53. si:dkey-66i24.10 si:dkey-66i24.10 6 0.986 - - - - 0.986 - - - -
54. gig2o ENSDARG00000086903 30 0.983 - - - - 0.983 - - - - grass carp reovirus (GCRV)-induced gene 2o [Source:ZFIN;Acc:ZDB-GENE-130517-8]
55. C20H1orf95 C20H1orf95 12 0.979 - - - - 0.979 - - - -
56. C10H11orf63 C10H11orf63 65 0.979 - - - - 0.979 - - - -
57. crygm2d14 ENSDARG00000087301 66 0.978 - - - 0.978 - - - - - crystallin, gamma M2d14 [Source:ZFIN;Acc:ZDB-GENE-070822-20]
58. HIST1H4J_2 HIST1H4J_2 12 0.975 - - - 0.975 - - - - -
59. nt5dc1 ENSDARG00000006797 3 0.973 - - - - 0.973 - - - - 5'-nucleotidase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8274]
60. ZDHHC12 ZDHHC12 29 0.972 - - - 0.972 - - - - -
61. CR933820.2 CR933820.2 152 0.972 - - - 0.972 - - - - -
62. CLSTN2 ENSDARG00000060637 41 0.971 - - - - 0.971 - - - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
63. zgc:136895 zgc:136895 41 0.969 - - - - 0.969 - - - -
64. GRM5_1 GRM5_1 18 0.968 - - - 0.968 - - - - -
65. NAGS ENSDARG00000077193 8 0.968 - - - - 0.968 - - - - N-acetylglutamate synthase [Source:ZFIN;Acc:ZDB-GENE-121219-2]
66. CR450686.1 ENSDARG00000091230 2 0.965 - - - 0.965 - - - - -
67. cryaa ENSDARG00000053502, ENSDARG00000113469 80 0.964 - - - 0.964 - - - - - crystallin, alpha A [Source:ZFIN;Acc:ZDB-GENE-020508-1]
68. crygm2d5 ENSDARG00000069792 207 0.964 - - - 0.964 - - - - - crystallin, gamma M2d5 [Source:ZFIN;Acc:ZDB-GENE-060918-4]
69. tecta ENSDARG00000059558 15 0.963 - - - - 0.963 - - - - tectorin alpha [Source:ZFIN;Acc:ZDB-GENE-110411-120]
70. KCNT2 ENSDARG00000075812 23 0.96 - - - - 0.960 - - - - potassium channel, subfamily T, member 2 [Source:ZFIN;Acc:ZDB-GENE-130530-783]
71. si:dkey-199m13.7 ENSDARG00000099837, ENSDARG00000111824 22 0.958 - - - - 0.958 - - - - si:dkey-199m13.7 [Source:ZFIN;Acc:ZDB-GENE-110914-26]
72. antxr1d ENSDARG00000060845 10 0.955 - - - - 0.955 - - - - ANTXR cell adhesion molecule 1d [Source:ZFIN;Acc:ZDB-GENE-090313-28]
73. cryba1a ENSDARG00000041141 8 0.953 - - - 0.953 - - - - - crystallin, beta A1a [Source:ZFIN;Acc:ZDB-GENE-040718-107]
74. AL935293.1 AL935293.1 2 0.953 - - - 0.953 - - - - -
75. CABZ01048021.1 CABZ01048021.1 15 0.947 - - - - 0.947 - - - -
76. zgc:55621 ENSDARG00000010782 3 0.942 - - - 0.942 - - - - - zgc:55621 [Source:ZFIN;Acc:ZDB-GENE-040426-762]
77. si:dkey-29d8.3 ENSDARG00000091879 21 0.942 - - - - 0.942 - - - - si:dkey-29d8.3 [Source:ZFIN;Acc:ZDB-GENE-070912-508]
78. si:ch211-30g3.8 si:ch211-30g3.8 10 0.94 - - - - 0.940 - - - -
79. zgc:165347 zgc:165347 1358 0.935 - - - 0.935 - - - - -
80. rnf34b ENSDARG00000054036 121 0.935 - - - - 0.935 - - - - ring finger protein 34b [Source:ZFIN;Acc:ZDB-GENE-071004-31]
81. crybb1l3 ENSDARG00000007655 33 0.931 - - - - 0.931 - - - - crystallin, beta B1, like 3 [Source:ZFIN;Acc:ZDB-GENE-070820-11]
82. rest ENSDARG00000103046 51 0.931 - - - - 0.931 - - - - RE1-silencing transcription factor [Source:ZFIN;Acc:ZDB-GENE-080415-1]
83. fam131ba ENSDARG00000070952 26 0.93 - - - 0.930 - - - - - family with sequence similarity 131, member Ba [Source:ZFIN;Acc:ZDB-GENE-060503-616]
84. crygn2 ENSDARG00000030411 2551 0.93 - - - 0.930 - - - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
85. celf3b ENSDARG00000006983 171 0.928 - - - 0.928 - - - - - cugbp, Elav-like family member 3b [Source:ZFIN;Acc:ZDB-GENE-110408-50]
86. zgc:113295_1 ENSDARG00000074768, ENSDARG00000103947 21 0.924 - - - - 0.924 - - - - zgc:113295 [Source:ZFIN;Acc:ZDB-GENE-050320-122]
87. mhc1zaa_1 ENSDARG00000092162 27 0.924 - - - - 0.924 - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
88. TULP2 TULP2 38 0.924 - - - - 0.924 - - - -
89. si:ch211-57m13.9 ENSDARG00000095884 10 0.922 - - - - 0.922 - - - - si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
90. ftr14 ENSDARG00000053293 77 0.922 - - - - 0.922 - - - - finTRIM family, member 14 [Source:ZFIN;Acc:ZDB-GENE-060512-201]
91. brinp3b ENSDARG00000075352 14 0.92 - - - - 0.920 - - - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
92. CDH16 ENSDARG00000077570 78 0.918 - - - - 0.918 - - - - cadherin 16, KSP-cadherin [Source:ZFIN;Acc:ZDB-GENE-140106-140]
93. si:rp71-45g20.6 si:rp71-45g20.6 19 0.916 - - - - 0.916 - - - -
94. crygm2d6 ENSDARG00000073874 38 0.915 - - - 0.915 - - - - - crystallin, gamma M2d6 [Source:ZFIN;Acc:ZDB-GENE-040625-145]
95. RGS14 RGS14 15 0.915 - - - 0.915 - - - - -
96. si:ch73-138i16.1 ENSDARG00000095562 8 0.915 - - - 0.915 - - - - - si:ch73-138i16.1 [Source:ZFIN;Acc:ZDB-GENE-070705-208]
97. zgc:86723 zgc:86723 299 0.915 - - - 0.915 - - - - -
98. hapln4 ENSDARG00000018542 10 0.915 - - - 0.915 - - - - - hyaluronan and proteoglycan link protein 4 [Source:ZFIN;Acc:ZDB-GENE-060503-243]
99. foxa ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 6 0.915 - - - 0.915 - - - - - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
100. si:dkey-206f10.1 ENSDARG00000032838 18 0.913 - - - 0.913 - - - - - si:dkey-206f10.1 [Source:ZFIN;Acc:ZDB-GENE-041014-154]

There are 120 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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