Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-210c8.5

Gene Name Gene ID Reads Annotation
si:ch211-210c8.5 si:ch211-210c8.5 6










Genes with expression patterns similar to si:ch211-210c8.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-210c8.5 si:ch211-210c8.5 6 4 1.000 - 1.000 1.000 1.000 - - - -
2. olfm3b ENSDARG00000039174 3 1.895 - - 1.000 0.895 - - - - - olfactomedin 3b [Source:ZFIN;Acc:ZDB-GENE-070912-606]
3. elovl4a ENSDARG00000006773 412 1.829 1.000 - - - 0.829 - - - - ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
4. kcnc4 ENSDARG00000061288, ENSDARG00000113894 95 1.789 0.807 - - - 0.982 - - - - potassium voltage-gated channel, Shaw-related subfamily, member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-773]
5. xkr8.1 ENSDARG00000004498 18 1.785 1.000 - - 0.785 - - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-110106-1]
6. wfikkn1 ENSDARG00000101364 11 1.714 1.000 - 0.714 - - - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2465]
7. ccdc78 ENSDARG00000030095 8 1.688 - - 0.793 0.895 - - - - - coiled-coil domain containing 78 [Source:ZFIN;Acc:ZDB-GENE-060301-1]
8. KCNJ3 KCNJ3 24 1.612 0.854 - - - 0.758 - - - -
9. CABZ01053592.1 ENSDARG00000117388 6 1 1.000 - - - - - - - -
10. MAMDC4 MAMDC4 3 1 1.000 - - - - - - - -
11. si:dkey-265k11.2 si:dkey-265k11.2 44 1 1.000 - - - - - - - -
12. BX530018.1 ENSDARG00000037576 2 1 1.000 - - - - - - - - D(1) dopamine receptor-like [Source:NCBI gene;Acc:567498]
13. kcng4 kcng4 37 1 1.000 - - - - - - - -
14. ROBO3 ENSDARG00000005645 10 1 - - 1.000 - - - - - - roundabout, axon guidance receptor, homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000209-4]
15. paqr5a ENSDARG00000041145, ENSDARG00000115247 38 1 1.000 - - - - - - - - progestin and adipoQ receptor family member Va [Source:ZFIN;Acc:ZDB-GENE-040426-867]
16. FUT9 FUT9 91 1 1.000 - - - - - - - -
17. si:dkey-79c1.1 ENSDARG00000093179 11 1 1.000 - - - - - - - - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
18. mlphb ENSDARG00000062481 14 1 1.000 - - - - - - - - melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]
19. CABZ01076817.1 CABZ01076817.1 4 1 1.000 - - - - - - - -
20. cnn1b ENSDARG00000102398 40 1 1.000 - - - - - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
21. npffr2.1 npffr2.1 60 1 1.000 - - - - - - - -
22. BX324155.2 BX324155.2 1 1 1.000 - - - - - - - -
23. synpr ENSDARG00000044278 20 1 1.000 - - - - - - - - synaptoporin [Source:ZFIN;Acc:ZDB-GENE-030616-625]
24. si:ch211-167j6.3 ENSDARG00000095504 5 1 - - 1.000 - - - - - - si:ch211-167j6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-145]
25. SNORA31 SNORA31 23 1 1.000 - - - - - - - -
26. kcnt1 ENSDARG00000079484 45 1 1.000 - - - - - - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
27. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 1.000 - - - - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
28. CU570691.1 ENSDARG00000088908 5 1 1.000 - - - - - - - -
29. si:dkey-179k24.6 si:dkey-179k24.6 5 1 1.000 - - - - - - - -
30. tmem176l.2 ENSDARG00000089399 22 1 - - 1.000 - - - - - - transmembrane protein 176l.2 [Source:ZFIN;Acc:ZDB-GENE-080829-12]
31. si:dkey-66n24.2 si:dkey-66n24.2 69 1 1.000 - - - - - - - -
32. BX470131.1 BX470131.1 86 1 1.000 - - - - - - - -
33. jakmip2 ENSDARG00000053547 32 1 1.000 - - - - - - - - janus kinase and microtubule interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-293]
34. tmem196b ENSDARG00000090140 20 1 1.000 - - - - - - - - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
35. FAXC FAXC 102 1 1.000 - - - - - - - -
36. rtn4r ENSDARG00000090035 46 1 1.000 - - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
37. CSMD1 CSMD1 15 1 1.000 - - - - - - - -
38. AP5Z1 ENSDARG00000078111 91 1 1.000 - - - - - - - - adaptor related protein complex 5 subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-120508-2]
39. NPBWR2 NPBWR2 132 1 1.000 - - - - - - - -
40. chst2b ENSDARG00000058585 33 1 1.000 - - - - - - - - carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b [Source:ZFIN;Acc:ZDB-GENE-060720-33]
41. si:ch211-182e10.4 ENSDARG00000070661, ENSDARG00000070757 1 1 - - 1.000 - - - - - - si:ch211-182e10.4 [Source:ZFIN;Acc:ZDB-GENE-041014-76]
42. BX323861.1 ENSDARG00000099765 37 1 1.000 - - - - - - - -
43. BX950859.2 BX950859.2 10 1 - - 1.000 - - - - - -
44. lppr5b lppr5b 23 1 1.000 - - - - - - - -
45. asic1b ENSDARG00000101866 61 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
46. CABZ01113978.1 CABZ01113978.1 1 1 1.000 - - - - - - - -
47. PGBD4 ENSDARG00000079328 20 1 1.000 - - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
48. ADAP2 ENSDARG00000070565 29 1 1.000 - - - - - - - - ArfGAP with dual PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-070912-21]
49. si:dkey-4j21.1 17 1 1.000 - - - - - - - - si:dkey-4j21.1, transcript variant X2
50. CU570981.1 CU570981.1 9 1 - - 1.000 - - - - - -
51. sycp3 ENSDARG00000013438 25 1 1.000 - - - - - - - - synaptonemal complex protein 3 [Source:ZFIN;Acc:ZDB-GENE-040910-2]
52. si:dkey-56m15.4 si:dkey-56m15.4 39 1 1.000 - - - - - - - -
53. si:dkey-92c21.3 si:dkey-92c21.3 2 1 - - 1.000 - - - - - -
54. si:ch211-14g4.4 si:ch211-14g4.4 6 1 1.000 - - - - - - - -
55. npas4a ENSDARG00000055752 5 1 - - 1.000 - - - - - - neuronal PAS domain protein 4a [Source:ZFIN;Acc:ZDB-GENE-060616-396]
56. MAST1 MAST1 29 1 1.000 - - - - - - - -
57. si:dkey-17e6.2 si:dkey-17e6.2 72 1 1.000 - - - - - - - -
58. SNORA19 SNORA19 24 1 1.000 - - - - - - - -
59. si:ch211-64i20.3 ENSDARG00000089934, ENSDARG00000105063 42 1 - - 1.000 - - - - - - si:ch211-64i20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-55]
60. BX548021.2 BX548021.2 4 1 1.000 - - - - - - - -
61. gdf10b ENSDARG00000073891 116 1 1.000 - - - - - - - - growth differentiation factor 10b [Source:ZFIN;Acc:ZDB-GENE-120316-1]
62. wu:fj39g12 ENSDARG00000043460 8 1 1.000 - - - - - - - - wu:fj39g12 [Source:ZFIN;Acc:ZDB-GENE-030131-7901]
63. trim9 ENSDARG00000039123 53 1 1.000 - - - - - - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
64. rrnad1_1 ENSDARG00000089033 43 1 - - 1.000 - - - - - - ribosomal RNA adenine dimethylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-515]
65. si:ch211-113a14.14 si:ch211-113a14.14 3 1 1.000 - - - - - - - -
66. kcng1 ENSDARG00000099038 23 1 1.000 - - - - - - - - potassium voltage-gated channel, subfamily G, member 1 [Source:ZFIN;Acc:ZDB-GENE-080220-5]
67. si:dkey-233h12.2 si:dkey-233h12.2 1 1 1.000 - - - - - - - -
68. U1_46 U1_46 1 1 - - 1.000 - - - - - -
69. zgc:174694 zgc:174694 2 1 1.000 - - - - - - - -
70. BICD1 BICD1 9 1 1.000 - - - - - - - -
71. mamdc2a ENSDARG00000098345 21 1 - - 1.000 - - - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
72. VASH1 ENSDARG00000092716 33 1 1.000 - - - - - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
73. CABZ01021433.1 ENSDARG00000105696 74 1 1.000 - - - - - - - - si:cabz01021433.2 [Source:NCBI gene;Acc:100333857]
74. PLBD1 ENSDARG00000063313 1 1 - - 1.000 - - - - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
75. s100t ENSDARG00000055589 453 1 1.000 - - - - - - - - S100 calcium binding protein T [Source:ZFIN;Acc:ZDB-GENE-050320-61]
76. DLK1 60 1 1.000 - - - - - - - - delta like non-canonical Notch ligand 1
77. zdhhc12b ENSDARG00000052787 43 1 1.000 - - - - - - - - zinc finger, DHHC-type containing 12b [Source:ZFIN;Acc:ZDB-GENE-070705-356]
78. opn4a ENSDARG00000022098, ENSDARG00000110010 3 1 - - 1.000 - - - - - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
79. zgc:153039 ENSDARG00000102724 4 1 1.000 - - - - - - - - zgc:153039 [Source:ZFIN;Acc:ZDB-GENE-060929-736]
80. LRFN2_1 LRFN2_1 17 1 1.000 - - - - - - - -
81. sema7a ENSDARG00000078707 70 1 1.000 - - - - - - - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
82. si:dkey-266f7.10 ENSDARG00000086613 7 1 1.000 - - - - - - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
83. shank2 ENSDARG00000062325 66 1 1.000 - - - - - - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
84. ARID5B ENSDARG00000037196 165 1 1.000 - - - - - - - - AT-rich interaction domain 5B [Source:ZFIN;Acc:ZDB-GENE-121214-272]
85. si:ch211-260c23.1 13 1 - - 1.000 - - - - - - si:ch211-260c23.1, transcript variant X7
86. LPHN1_1 LPHN1_1 7 1 1.000 - - - - - - - -
87. CABZ01073736.1 ENSDARG00000099438 81 1 1.000 - - - - - - - -
88. si:ch211-10j20.7 si:ch211-10j20.7 8 1 1.000 - - - - - - - -
89. si:dkey-150k17.3 33 1 1.000 - - - - - - - - si:dkey-150k17.3
90. AL929291.1 AL929291.1 16 1 1.000 - - - - - - - -
91. chrm4a ENSDARG00000069254 32 1 1.000 - - - - - - - - cholinergic receptor, muscarinic 4a [Source:ZFIN;Acc:ZDB-GENE-090410-6]
92. fam154b fam154b 2 1 - - 1.000 - - - - - -
93. CABZ01041804.1 CABZ01041804.1 312 1 1.000 - - - - - - - -
94. si:dkey-65b12.12 ENSDARG00000094458 26 1 1.000 - - - - - - - - si:dkey-65b12.12 [Source:ZFIN;Acc:ZDB-GENE-060526-325]
95. si:dkey-274m14.3 si:dkey-274m14.3 7 1 1.000 - - - - - - - -
96. CCL-C11B CCL-C11B 51 1 1.000 - - - - - - - -
97. twsg1b 7 1 - - 1.000 - - - - - - twisted gastrulation BMP signaling modulator 1b
98. CABZ01032469.1 CABZ01032469.1 34 1 1.000 - - - - - - - -
99. rccd1_1 ENSDARG00000071074 24 1 1.000 - - - - - - - - RCC1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3552]
100. zgc:77118 ENSDARG00000014208, ENSDARG00000093176 63 1 1.000 - - - - - - - - zgc:77118 [Source:ZFIN;Acc:ZDB-GENE-040426-2211]

There are 536 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA