Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-209n20.58

Gene Name Gene ID Reads Annotation
si:ch211-209n20.58 si:ch211-209n20.58 1










Genes with expression patterns similar to si:ch211-209n20.58

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-209n20.58 si:ch211-209n20.58 1 3 - - - 1.000 - - - 1.000 1.000
2. AL935296.1 AL935296.1 4 2 - - - - - - - 1.000 1.000
3. prph2a ENSDARG00000038018 2 2 - - - 1.000 - - - - 1.000 peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
4. ptprub_1 ENSDARG00000101081 0 2 - - - 1.000 - - - - 1.000 protein tyrosine phosphatase, receptor type, U, b [Source:ZFIN;Acc:ZDB-GENE-030131-7036]
5. gnrh2 ENSDARG00000044754, ENSDARG00000116186 55 1.728 - - - 0.761 - - - - 0.967 gonadotropin-releasing hormone 2 [Source:ZFIN;Acc:ZDB-GENE-030516-1]
6. si:dkey-285e18.6 ENSDARG00000098144 1 1 - - - - - - - - 1.000 si:dkey-285e18.6 [Source:ZFIN;Acc:ZDB-GENE-120709-86]
7. or115-1 ENSDARG00000018521 1 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 1 [Source:ZFIN;Acc:ZDB-GENE-010309-2]
8. U3_6 U3_6 0 1 - - - - - - - - 1.000
9. si:dkey-20f20.3 si:dkey-20f20.3 7 1 - - - - - - - - 1.000
10. si:dkey-19j7.4 si:dkey-19j7.4 1 1 - - - 1.000 - - - - -
11. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - - - 1.000 - - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
12. crygm2d15 ENSDARG00000069826 48 1 - - - 1.000 - - - - - crystallin, gamma M2d15 [Source:ZFIN;Acc:ZDB-GENE-040718-322]
13. SLC6A11 SLC6A11 0 1 - - - - - - - - 1.000
14. dcst2 ENSDARG00000088693 1 1 - - - - - - - - 1.000 DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
15. si:dkey-34f9.3 ENSDARG00000077813 3 1 - - - 1.000 - - - - - si:dkey-34f9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-410]
16. KLHDC8A ENSDARG00000061000 13 1 - - - 1.000 - - - - - kelch domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-120810-3]
17. si:ch211-250o15.5 si:ch211-250o15.5 1 1 - - - - - - - 1.000 -
18. or137-3 ENSDARG00000070344 1 1 - - - - - - - - 1.000 odorant receptor, family H, subfamily 137, member 3 [Source:ZFIN;Acc:ZDB-GENE-070806-24]
19. cxcr3.1_1 ENSDARG00000007358, ENSDARG00000078177, ENSDARG00000111607 0 1 - - - - - - - - 1.000 chemokine (C-X-C motif) receptor 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060130-38]
20. CABZ01075923.1 CABZ01075923.1 6 1 - - - 1.000 - - - - -
21. lratb 3 1 - - - 1.000 - - - - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
22. cyp39a1 ENSDARG00000017982 4 1 - - - - - - - 1.000 - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
23. Metazoa_SRP_23 Metazoa_SRP_23 3 1 - - - 1.000 - - - - -
24. si:dkey-179o14.4 si:dkey-179o14.4 2 1 - - - 1.000 - - - - -
25. FAM183B FAM183B 25 1 - - - - - - - - 1.000
26. si:dkey-33g13.1 si:dkey-33g13.1 3 1 - - - 1.000 - - - - -
27. gpr34b ENSDARG00000002959 0 1 - - - 1.000 - - - - - G protein-coupled receptor 34b [Source:ZFIN;Acc:ZDB-GENE-040823-1]
28. ENSDARG00000088134 ENSDARG00000088134 16 1 - - - 1.000 - - - - -
29. svopa ENSDARG00000056833 14 1 - - - 1.000 - - - - - SV2 related protein a [Source:ZFIN;Acc:ZDB-GENE-060526-336]
30. CT990567.1 ENSDARG00000100384 0 1 - - - - - - - - 1.000
31. bicc2_1 ENSDARG00000076557 6 1 - - - 1.000 - - - - - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
32. smarcd3b ENSDARG00000019969 11 1 - - - - - - - - 1.000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
33. cers3b ENSDARG00000036337 1 1 - - - 1.000 - - - - - ceramide synthase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-32]
34. si:ch211-57f7.7 ENSDARG00000093131 8 1 - - - - - - - - 1.000 si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]
35. si:ch211-222k6.3 ENSDARG00000071578 127 1 - - - 1.000 - - - - - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
36. BX324198.1 BX324198.1 12 1 - - - 1.000 - - - - -
37. CR792453.3 ENSDARG00000110328 5 1 - - - - - - - - 1.000 uncharacterized LOC110438862 [Source:NCBI gene;Acc:110438862]
38. RAB3IL1 ENSDARG00000007711 11 1 - - - - - - - - 1.000 RAB3A interacting protein (rabin3)-like 1 [Source:ZFIN;Acc:ZDB-GENE-110921-5]
39. si:dkey-61m24.1 0 1 - - - 1.000 - - - - - si:dkey-61m24.1
40. RASSF7 RASSF7 0 1 - - - - - - - - 1.000
41. CU681840.1 CU681840.1 3 1 - - - 1.000 - - - - -
42. or128-8 ENSDARG00000094462 0 1 - - - - - - - - 1.000 odorant receptor, family E, subfamily 128, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-112]
43. zgc:113425 ENSDARG00000026616 29 1 - - - 1.000 - - - - - zgc:113425 [Source:ZFIN;Acc:ZDB-GENE-050320-128]
44. BX005234.1 ENSDARG00000097761 3 1 - - - 1.000 - - - - -
45. CU694226.2 CU694226.2 2 1 - - - - - - - - 1.000
46. CABZ01081748.1 ENSDARG00000102139 31 1 - - - 1.000 - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
47. GRAMD2_1 GRAMD2_1 12 1 - - - 1.000 - - - - -
48. pcdh2g9 1 1 - - - - - - - - 1.000 protocadherin 2 gamma 9
49. CT033818.1 CT033818.1 0 1 - - - - - - - - 1.000
50. ZNF70 ZNF70 2 1 - - - - - - - - 1.000
51. si:dkey-233e3.5 si:dkey-233e3.5 7 1 - - - 1.000 - - - - -
52. rhobtb2b ENSDARG00000089340 4 1 - - - 1.000 - - - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
53. si:dkey-285e18.5 ENSDARG00000093665 5 1 - - - 1.000 - - - - - si:dkey-285e18.5 [Source:ZFIN;Acc:ZDB-GENE-120703-44]
54. gria1b ENSDARG00000032714, ENSDARG00000111658 12 1 - - - 1.000 - - - - - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
55. acoxl ENSDARG00000020149 14 1 - - - - - - - 1.000 - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
56. CABZ01046996.1 ENSDARG00000111833 1 1 - - - 1.000 - - - - -
57. irbp 2 1 - - - - - - - - 1.000 interphotoreceptor retinoid-binding protein, transcript variant X2
58. zgc:113307 ENSDARG00000044894 17 1 - - - - - - - - 1.000 zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
59. CDR2_1 CDR2_1 8 1 - - - - - - - 1.000 -
60. si:dkey-279j5.1 ENSDARG00000101459 17 1 - - - - - - - 1.000 - si:dkey-279j5.1 [Source:ZFIN;Acc:ZDB-GENE-120703-27]
61. PACS1_2 PACS1_2 0 1 - - - - - - - - 1.000
62. v2rl1 ENSDARG00000005942 1 1 - - - - - - - - 1.000 vomeronasal 2 receptor, l1 [Source:ZFIN;Acc:ZDB-GENE-050419-65]
63. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - - - - - 1.000
64. CR318593.1_1 CR318593.1_1 8 1 - - - - - - - - 1.000
65. CR753866.2 CR753866.2 6 1 - - - - - - - 1.000 -
66. pi15b ENSDARG00000061292 1 1 - - - 1.000 - - - - - peptidase inhibitor 15b [Source:ZFIN;Acc:ZDB-GENE-070912-590]
67. ATP6V1C2 ENSDARG00000070440 2 1 - - - 1.000 - - - - - ATPase H+ transporting V1 subunit C2 [Source:ZFIN;Acc:ZDB-GENE-131127-65]
68. CR388413.1 ENSDARG00000100537 1 1 - - - - - - - - 1.000
69. nitr1l 0 1 - - - - - - - - 1.000 novel immune-type receptor 1l, transcript variant X2
70. si:ch211-232m19.4 19 1 - - - 1.000 - - - - - si:ch211-232m19.4
71. CU638737.1 CU638737.1 17 1 - - - 1.000 - - - - -
72. CR854855.2 CR854855.2 1 1 - - - - - - - - 1.000
73. C11H3orf14 C11H3orf14 15 1 - - - 1.000 - - - - -
74. cep41 ENSDARG00000038500, ENSDARG00000117114 4 1 - - - - - - - - 1.000 centrosomal protein 41 [Source:ZFIN;Acc:ZDB-GENE-040704-35]
75. snoMBII-202_1 snoMBII-202_1 2 1 - - - 1.000 - - - - -
76. si:dkey-14o18.1 si:dkey-14o18.1 108 1 - - - 1.000 - - - - -
77. si:ch211-217k17.3 si:ch211-217k17.3 2 1 - - - - - - - - 1.000
78. pcolce2b ENSDARG00000055575 2 1 - - - - - - - - 1.000 procollagen C-endopeptidase enhancer 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1177]
79. ak7b ENSDARG00000017023 25 1 - - - - - - - - 1.000 adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
80. faah2b ENSDARG00000054786, ENSDARG00000112726 10 1 - - - - - - - - 1.000 fatty acid amide hydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061027-358]
81. si:dkey-49n23.1 ENSDARG00000040920 3 1 - - - 1.000 - - - - - si:dkey-49n23.1 [Source:ZFIN;Acc:ZDB-GENE-050208-762]
82. mir30b 4 1 - - - 1.000 - - - - - microRNA 30b
83. foxb2 ENSDARG00000037475 1 1 - - - - - - - - 1.000 forkhead box B2 [Source:ZFIN;Acc:ZDB-GENE-081104-320]
84. diaph3 ENSDARG00000090785 16 1 - - - - - - - - 1.000 diaphanous-related formin 3 [Source:ZFIN;Acc:ZDB-GENE-040801-144]
85. grin1b ENSDARG00000025728 4 1 - - - 1.000 - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 1b [Source:ZFIN;Acc:ZDB-GENE-051202-2]
86. aire ENSDARG00000056784 0 1 - - - - - - - - 1.000 autoimmune regulator [Source:ZFIN;Acc:ZDB-GENE-071008-4]
87. elfn2 elfn2 1 1 - - - - - - - - 1.000
88. irf4a ENSDARG00000006560 4 1 - - - - - - - 1.000 - interferon regulatory factor 4a [Source:ZFIN;Acc:ZDB-GENE-070912-330]
89. zgc:173708 zgc:173708 2 1 - - - - - - - - 1.000
90. CU075911.1 CU075911.1 2 1 - - - - - - - - 1.000
91. BX465848.1 ENSDARG00000114947 1 1 - - - - - - - - 1.000
92. si:ch211-239m17.2 si:ch211-239m17.2 1 1 - - - - - - - - 1.000
93. zgc:171731 ENSDARG00000014657, ENSDARG00000112592 5 1 - - - - - - - - 1.000 zgc:171731 [Source:ZFIN;Acc:ZDB-GENE-071004-27]
94. GARNL3 GARNL3 1 1 - - - - - - - - 1.000
95. crygm5 ENSDARG00000041179, ENSDARG00000112467 1 1 - - - - - - - - 1.000 crystallin, gamma M5 [Source:ZFIN;Acc:ZDB-GENE-041024-6]
96. si:ch73-366i20.25 si:ch73-366i20.25 6 1 - - - - - - - - 1.000
97. si:dkeyp-104f11.1 si:dkeyp-104f11.1 1 1 - - - - - - - - 1.000
98. lrit1a ENSDARG00000019179 9 1 - - - - - - - - 1.000 leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a [Source:ZFIN;Acc:ZDB-GENE-040924-5]
99. med8 ENSDARG00000114425 7 1 - - - 1.000 - - - - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
100. cabp1b ENSDARG00000033411 2 1 - - - - - - - - 1.000 calcium binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040718-111]

There are 219 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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