Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-209n20.58

Gene Name Gene ID Reads Annotation
si:ch211-209n20.58 si:ch211-209n20.58 1










Genes with expression patterns similar to si:ch211-209n20.58

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-209n20.58 si:ch211-209n20.58 1 3 - - - 1.000 - - - 1.000 1.000
2. ptprub_1 ENSDARG00000101081 0 2 - - - 1.000 - - - - 1.000 protein tyrosine phosphatase, receptor type, U, b [Source:ZFIN;Acc:ZDB-GENE-030131-7036]
3. prph2a ENSDARG00000038018 2 2 - - - 1.000 - - - - 1.000 peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
4. AL935296.1 AL935296.1 4 2 - - - - - - - 1.000 1.000
5. gnrh2 ENSDARG00000044754, ENSDARG00000116186 55 1.728 - - - 0.761 - - - - 0.967 gonadotropin-releasing hormone 2 [Source:ZFIN;Acc:ZDB-GENE-030516-1]
6. BX119910.11 BX119910.11 3 1 - - - - - - - - 1.000
7. si:dkey-11f4.20 ENSDARG00000100887 38 1 - - - 1.000 - - - - - si:dkey-11f4.20 [Source:ZFIN;Acc:ZDB-GENE-070912-359]
8. rpgrip1l ENSDARG00000051754 2 1 - - - 1.000 - - - - - RPGRIP1-like [Source:ZFIN;Acc:ZDB-GENE-081104-81]
9. taar14e ENSDARG00000090372, ENSDARG00000112236 0 1 - - - 1.000 - - - - - trace amine associated receptor 14e [Source:ZFIN;Acc:ZDB-GENE-041210-317]
10. zgc:113425 ENSDARG00000026616 29 1 - - - 1.000 - - - - - zgc:113425 [Source:ZFIN;Acc:ZDB-GENE-050320-128]
11. TNFRSF25 TNFRSF25 6 1 - - - - - - - 1.000 -
12. smarcd3b ENSDARG00000019969 11 1 - - - - - - - - 1.000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
13. pcdh1a3 ENSDARG00000103602 4 1 - - - 1.000 - - - - - protocadherin 1 alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050202-3]
14. CABZ01085626.1 ENSDARG00000117294 8 1 - - - - - - - - 1.000
15. or132-5 ENSDARG00000056277 0 1 - - - 1.000 - - - - - odorant receptor, family H, subfamily 132, member 5 [Source:ZFIN;Acc:ZDB-GENE-070806-21]
16. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - - - 1.000 - - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
17. FBXO10_1 FBXO10_1 0 1 - - - 1.000 - - - - -
18. or128-8 ENSDARG00000094462 0 1 - - - - - - - - 1.000 odorant receptor, family E, subfamily 128, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-112]
19. cyp39a1 ENSDARG00000017982 4 1 - - - - - - - 1.000 - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
20. si:dkey-33g13.1 si:dkey-33g13.1 3 1 - - - 1.000 - - - - -
21. pip5kl1 ENSDARG00000060946 2 1 - - - - - - - - 1.000 phosphatidylinositol-4-phosphate 5-kinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-060526-248]
22. si:dkey-14o18.1 si:dkey-14o18.1 108 1 - - - 1.000 - - - - -
23. spg20a 8 1 - - - 1.000 - - - - - spastic paraplegia 20a (Troyer syndrome), transcript variant X1
24. pcdh1a4 0 1 - - - 1.000 - - - - - protocadherin 1 alpha 4
25. ENSDARG00000070788 ENSDARG00000070788 1 1 - - - - - - - 1.000 -
26. CABZ01046996.1 ENSDARG00000111833 1 1 - - - 1.000 - - - - -
27. ZNF70_6 ZNF70_6 15 1 - - - 1.000 - - - - -
28. CABZ01034089.2 CABZ01034089.2 0 1 - - - - - - - - 1.000
29. MAD2L2 ENSDARG00000042456 0 1 - - - 1.000 - - - - - mitotic arrest deficient 2 like 2 [Source:ZFIN;Acc:ZDB-GENE-050417-61]
30. zgc:174311 zgc:174311 3 1 - - - - - - - - 1.000
31. ATP6V1C2 ENSDARG00000070440 2 1 - - - 1.000 - - - - - ATPase H+ transporting V1 subunit C2 [Source:ZFIN;Acc:ZDB-GENE-131127-65]
32. BX005234.1 ENSDARG00000097761 3 1 - - - 1.000 - - - - -
33. mir30b 4 1 - - - 1.000 - - - - - microRNA 30b
34. SLC4A3 ENSDARG00000104005 2 1 - - - - - - - 1.000 - solute carrier family 4 (anion exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-141006-1]
35. zgc:171731 ENSDARG00000014657, ENSDARG00000112592 5 1 - - - - - - - - 1.000 zgc:171731 [Source:ZFIN;Acc:ZDB-GENE-071004-27]
36. zgc:173708 zgc:173708 2 1 - - - - - - - - 1.000
37. CU075911.1 CU075911.1 2 1 - - - - - - - - 1.000
38. RAB3IL1 ENSDARG00000007711 11 1 - - - - - - - - 1.000 RAB3A interacting protein (rabin3)-like 1 [Source:ZFIN;Acc:ZDB-GENE-110921-5]
39. si:ch211-57f7.7 ENSDARG00000093131 8 1 - - - - - - - - 1.000 si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]
40. lrrc9 ENSDARG00000054352 25 1 - - - 1.000 - - - - - leucine rich repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-080917-56]
41. lratb 3 1 - - - 1.000 - - - - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
42. lrp6 ENSDARG00000100143 1 1 - - - 1.000 - - - - - low density lipoprotein receptor-related protein 6 [Source:ZFIN;Acc:ZDB-GENE-090821-1]
43. ttll2 ENSDARG00000077853 9 1 - - - - - - - - 1.000 tubulin tyrosine ligase-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-297]
44. si:dkey-71l1.1 ENSDARG00000052411 11 1 - - - - - - - - 1.000 si:dkey-71l1.1 [Source:ZFIN;Acc:ZDB-GENE-070705-489]
45. FP245465.3 FP245465.3 5 1 - - - - - - - - 1.000
46. CR792453.3 ENSDARG00000110328 5 1 - - - - - - - - 1.000 uncharacterized LOC110438862 [Source:NCBI gene;Acc:110438862]
47. SNORA62_2 SNORA62_2 4 1 - - - - - - - - 1.000
48. CU062632.1 ENSDARG00000117236 0 1 - - - 1.000 - - - - - ubiquitin-conjugating enzyme E2O [Source:NCBI gene;Acc:101883975]
49. C11H3orf14 C11H3orf14 15 1 - - - 1.000 - - - - -
50. fhit ENSDARG00000078195 0 1 - - - - - - - - 1.000 fragile histidine triad gene [Source:ZFIN;Acc:ZDB-GENE-040426-1703]
51. fam196ab 2 1 - - - 1.000 - - - - - family with sequence similarity 196, member Ab
52. si:ch211-182e10.4 ENSDARG00000070661, ENSDARG00000070757 1 1 - - - 1.000 - - - - - si:ch211-182e10.4 [Source:ZFIN;Acc:ZDB-GENE-041014-76]
53. C1GALT1_1 C1GALT1_1 1 1 - - - 1.000 - - - - -
54. CABZ01075923.1 CABZ01075923.1 6 1 - - - 1.000 - - - - -
55. BX510935.2 BX510935.2 1 1 - - - - - - - - 1.000
56. wfikkn1 ENSDARG00000101364 11 1 - - - 1.000 - - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2465]
57. ttll3 ENSDARG00000053728 7 1 - - - - - - - - 1.000 tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
58. grin1b ENSDARG00000025728 4 1 - - - 1.000 - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 1b [Source:ZFIN;Acc:ZDB-GENE-051202-2]
59. si:ch211-231i17.4 ENSDARG00000094903 2 1 - - - - - - - - 1.000 si:ch211-231i17.4 [Source:ZFIN;Acc:ZDB-GENE-110914-104]
60. CR589947.1 ENSDARG00000079269 5 1 - - - - - - - 1.000 -
61. RMI2 ENSDARG00000103137 0 1 - - - 1.000 - - - - - RecQ mediated genome instability 2 [Source:ZFIN;Acc:ZDB-GENE-131125-13]
62. si:ch73-138e16.7 si:ch73-138e16.7 0 1 - - - - - - - - 1.000
63. CT990567.1 ENSDARG00000100384 0 1 - - - - - - - - 1.000
64. CU694226.2 CU694226.2 2 1 - - - - - - - - 1.000
65. CCDC15 ENSDARG00000067517 28 1 - - - - - - - - 1.000 coiled-coil domain containing 15 [Source:ZFIN;Acc:ZDB-GENE-120411-25]
66. or128-1 ENSDARG00000105730 1 1 - - - - - - - - 1.000 odorant receptor, family E, subfamily 128, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-106]
67. si:ch211-239m17.2 si:ch211-239m17.2 1 1 - - - - - - - - 1.000
68. CABZ01084273.1 CABZ01084273.1 16 1 - - - 1.000 - - - - -
69. si:dkey-19j7.4 si:dkey-19j7.4 1 1 - - - 1.000 - - - - -
70. pax7a ENSDARG00000100398, ENSDARG00000111233 37 1 - - - - - - - 1.000 - paired box 7a [Source:ZFIN;Acc:ZDB-GENE-990415-201]
71. klf5b ENSDARG00000062106 7 1 - - - 1.000 - - - - - Kruppel-like factor 5b [Source:ZFIN;Acc:ZDB-GENE-080424-4]
72. crygm2d15 ENSDARG00000069826 48 1 - - - 1.000 - - - - - crystallin, gamma M2d15 [Source:ZFIN;Acc:ZDB-GENE-040718-322]
73. si:ch211-220i18.4 ENSDARG00000030262 10 1 - - - - - - - 1.000 - si:ch211-220i18.4 [Source:ZFIN;Acc:ZDB-GENE-090312-151]
74. CR391998.1 ENSDARG00000091817 15 1 - - - - - - - - 1.000 putative protein TPRXL [Source:NCBI gene;Acc:101882255]
75. si:ch211-274k16.4 si:ch211-274k16.4 6 1 - - - 1.000 - - - - -
76. CT025771.1 ENSDARG00000117721 13 1 - - - 1.000 - - - - -
77. KCNMB3 KCNMB3 5 1 - - - - - - - - 1.000
78. kcnq3 ENSDARG00000060085 0 1 - - - - - - - - 1.000 potassium voltage-gated channel, KQT-like subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-301]
79. gig2j ENSDARG00000069769, ENSDARG00000110674 1 1 - - - - - - - 1.000 - grass carp reovirus (GCRV)-induced gene 2j [Source:ZFIN;Acc:ZDB-GENE-081022-181]
80. irbp 2 1 - - - - - - - - 1.000 interphotoreceptor retinoid-binding protein, transcript variant X2
81. KLHDC8A ENSDARG00000061000 13 1 - - - 1.000 - - - - - kelch domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-120810-3]
82. pdha1b ENSDARG00000010555, ENSDARG00000114832 4 1 - - - 1.000 - - - - - pyruvate dehydrogenase E1 alpha 1 subunit b [Source:ZFIN;Acc:ZDB-GENE-040718-96]
83. hsf4 ENSDARG00000013251 5 1 - - - 1.000 - - - - - heat shock transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-050306-18]
84. dcst2 ENSDARG00000088693 1 1 - - - - - - - - 1.000 DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
85. si:ch211-232m10.6 ENSDARG00000070931 2 1 - - - 1.000 - - - - - si:ch211-232m10.6 [Source:ZFIN;Acc:ZDB-GENE-060503-879]
86. FAM183B FAM183B 25 1 - - - - - - - - 1.000
87. aire ENSDARG00000056784 0 1 - - - - - - - - 1.000 autoimmune regulator [Source:ZFIN;Acc:ZDB-GENE-071008-4]
88. si:dkey-179o14.4 si:dkey-179o14.4 2 1 - - - 1.000 - - - - -
89. glsa ENSDARG00000062812 1 1 - - - 1.000 - - - - - glutaminase a [Source:ZFIN;Acc:ZDB-GENE-050204-3]
90. cep41 ENSDARG00000038500, ENSDARG00000117114 4 1 - - - - - - - - 1.000 centrosomal protein 41 [Source:ZFIN;Acc:ZDB-GENE-040704-35]
91. hs3st2 ENSDARG00000059616 2 1 - - - 1.000 - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070202-7]
92. or115-11 ENSDARG00000053813 0 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 11 [Source:ZFIN;Acc:ZDB-GENE-070806-12]
93. si:dkey-179k24.2 ENSDARG00000112369 2 1 - - - - - - - 1.000 - si:dkey-179k24.2 [Source:ZFIN;Acc:ZDB-GENE-110914-40]
94. si:ch211-286l10.2 si:ch211-286l10.2 1 1 - - - - - - - - 1.000
95. CR318593.1_1 CR318593.1_1 8 1 - - - - - - - - 1.000
96. CABZ01060813.1 CABZ01060813.1 12 1 - - - - - - - - 1.000
97. uts1 ENSDARG00000014927 35 1 - - - 1.000 - - - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
98. GRAMD2_1 GRAMD2_1 12 1 - - - 1.000 - - - - -
99. ptchd1 ENSDARG00000018066 3 1 - - - - - - - - 1.000 patched domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061220-1]
100. med8 ENSDARG00000114425 7 1 - - - 1.000 - - - - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]

There are 219 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA