Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-209n20.57

Gene Name Gene ID Reads Annotation
si:ch211-209n20.57 si:ch211-209n20.57 1188










Genes with expression patterns similar to si:ch211-209n20.57

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-209n20.57 si:ch211-209n20.57 1188 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. LPL_1 LPL_1 1150 1.968 - - 0.999 - - - - 0.969 -
3. brms1la ENSDARG00000006235 2011 1.959 - - 0.997 - - - - 0.962 - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
4. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.946 - - 0.998 - - - - 0.948 - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
5. MON2 ENSDARG00000099798 2359 1.915 - - 0.992 - - - - 0.923 - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:ZFIN;Acc:ZDB-GENE-030131-2712]
6. rbm8a ENSDARG00000016516 8789 1.906 - - 0.976 - - - - 0.930 - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
7. CABZ01013938.1 CABZ01013938.1 4497 1.858 - - 0.996 - - - - 0.862 -
8. tfam ENSDARG00000063145 4524 1.837 - 0.850 0.987 - - - - - - transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
9. MDFIC ENSDARG00000074223 781 1.727 - 0.765 - - - - - 0.962 - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
10. ctsz ENSDARG00000043081 1073 1.716 - - - - - - 0.782 0.934 - cathepsin Z [Source:ZFIN;Acc:ZDB-GENE-041010-139]
11. MRPL21 ENSDARG00000003846 3244 1.71 - - 0.992 - - - 0.718 - - mitochondrial ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-061027-183]
12. rab5aa ENSDARG00000018602 8947 1.708 - - - - - 0.760 - 0.948 - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
13. exoc5 ENSDARG00000060323 2450 1.705 - - 0.997 - - 0.708 - - - exocyst complex component 5 [Source:ZFIN;Acc:ZDB-GENE-080204-126]
14. ptcd3 ENSDARG00000103856 2107 1.704 - - 0.996 - - - 0.708 - - pentatricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6849]
15. znf207b ENSDARG00000101277, ENSDARG00000110098, ENSDARG00000115586 4227 1.7 - 0.714 0.986 - - - - - - zinc finger protein 207, b [Source:ZFIN;Acc:ZDB-GENE-030131-7377]
16. schip1 ENSDARG00000035175 3838 1.693 - - 0.986 - - - 0.707 - - schwannomin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-466]
17. CABZ01038494.1 ENSDARG00000088258 908 1.692 - - - - - 0.736 - 0.956 - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
18. ywhaqa ENSDARG00000042539 7034 1.679 - - 0.896 - - - - 0.783 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-040122-5]
19. snapin ENSDARG00000062382 1531 1.659 0.881 0.778 - - - - - - - SNAP-associated protein [Source:ZFIN;Acc:ZDB-GENE-060503-343]
20. grpel1 ENSDARG00000010021 3055 1.649 - - - - - - 0.716 0.933 - GrpE-like 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-051120-111]
21. si:ch211-79l20.4 1305 1.633 - 0.707 - - - - - 0.926 - si:ch211-79l20.4, transcript variant X3
22. FBXL3 FBXL3 1769 1.617 - 0.702 - - - - - 0.915 -
23. GATAD2B ENSDARG00000005834 3855 1.617 - - - - - 0.701 - 0.916 - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
24. tbc1d1 ENSDARG00000062081, ENSDARG00000109222 1592 1.616 - - - - - 0.707 - 0.909 - TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060710-1]
25. uso1 ENSDARG00000019581 479 1.604 - 0.811 - - - 0.793 - - - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
26. BX682552.2 BX682552.2 1427 1.602 - - - - - 0.716 - 0.886 -
27. taf11 ENSDARG00000037855 2624 1.597 - - - - - 0.705 - 0.892 - TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040718-283]
28. ufm1 ENSDARG00000043857 4152 1.575 - 0.717 - - - - - 0.858 - ubiquitin-fold modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2930]
29. hipk3b ENSDARG00000062082 1248 1.574 - 0.705 - - - - - 0.869 - homeodomain interacting protein kinase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-82]
30. wrap53 ENSDARG00000086150 975 1.554 - - - - - 0.819 0.735 - - WD repeat containing, antisense to TP53 [Source:ZFIN;Acc:ZDB-GENE-030131-515]
31. rps21 ENSDARG00000025850 25954 1.528 - - 0.758 - - - - 0.770 - ribosomal protein S21 [Source:ZFIN;Acc:ZDB-GENE-040426-1102]
32. raraa ENSDARG00000056783 1404 1.527 - 0.819 - - - 0.708 - - - retinoic acid receptor, alpha a [Source:ZFIN;Acc:ZDB-GENE-980526-284]
33. CABZ01081148.1 CABZ01081148.1 789 1.521 - 0.820 - - - 0.701 - - -
34. ARHGEF25 ARHGEF25 1159 1.519 - 0.716 - - - - 0.803 - -
35. ptges3b_1 ENSDARG00000089626 1670 1.516 - - - - - - 0.814 0.702 - prostaglandin E synthase 3b (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040625-144]
36. si:ch73-299h12.6 ENSDARG00000101319 373 1.498 - 0.749 - - - - 0.749 - - si:ch73-299h12.6 [Source:ZFIN;Acc:ZDB-GENE-081031-44]
37. slc7a10a ENSDARG00000008100 178 1.488 0.711 - - - - 0.777 - - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10a [Source:ZFIN;Acc:ZDB-GENE-080116-1]
38. slc45a4 ENSDARG00000077326 481 1.46 0.727 - - - - 0.733 - - - solute carrier family 45, member 4 [Source:ZFIN;Acc:ZDB-GENE-091230-5]
39. zgc:195282 ENSDARG00000079488 475 0.999 - - 0.999 - - - - - - zgc:195282 [Source:ZFIN;Acc:ZDB-GENE-081022-208]
40. acox1 ENSDARG00000014727 660 0.999 - - 0.999 - - - - - - acyl-CoA oxidase 1, palmitoyl [Source:ZFIN;Acc:ZDB-GENE-041010-219]
41. si:ch73-7i4.1 ENSDARG00000094554 771 0.999 - - 0.999 - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
42. si:ch73-303g23.4 si:ch73-303g23.4 386 0.999 - - 0.999 - - - - - -
43. PKP3 PKP3 391 0.999 - - 0.999 - - - - - -
44. tmem223 ENSDARG00000069494 1528 0.999 - - 0.999 - - - - - - transmembrane protein 223 [Source:ZFIN;Acc:ZDB-GENE-040801-113]
45. si:dkey-57a22.11 ENSDARG00000092651 660 0.999 - - 0.999 - - - - - - si:dkey-57a22.11 [Source:ZFIN;Acc:ZDB-GENE-081104-423]
46. suv420h2 2186 0.999 - - 0.999 - - - - - - suppressor of variegation 4-20 homolog 2 (Drosophila)
47. pih1d2 ENSDARG00000014849 389 0.999 - - 0.999 - - - - - - PIH1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041212-54]
48. CU638868.1 ENSDARG00000115797 487 0.999 - - 0.999 - - - - - - transmembrane protein 26a [Source:NCBI gene;Acc:794507]
49. trim36 ENSDARG00000062794 785 0.999 - - 0.999 - - - - - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
50. fam102aa ENSDARG00000102566 903 0.999 - - 0.999 - - - - - - family with sequence similarity 102, member Aa [Source:ZFIN;Acc:ZDB-GENE-081104-233]
51. taf1b ENSDARG00000028937 879 0.999 - - 0.999 - - - - - - TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B [Source:ZFIN;Acc:ZDB-GENE-041008-2]
52. eaf1 ENSDARG00000070795, ENSDARG00000113962 834 0.999 - - 0.999 - - - - - - ELL associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-109]
53. mfsd11 ENSDARG00000102828 1043 0.999 - - 0.999 - - - - - - major facilitator superfamily domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-050913-140]
54. si:dkey-94l16.4 ENSDARG00000090142 791 0.998 - - 0.998 - - - - - - si:dkey-94l16.4 [Source:ZFIN;Acc:ZDB-GENE-121214-291]
55. dlg1l ENSDARG00000102216 1960 0.998 - - 0.998 - - - - - - discs, large (Drosophila) homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-050222-3]
56. C19H1orf85 C19H1orf85 1587 0.998 - - 0.998 - - - - - -
57. atpaf1 ENSDARG00000042799 1309 0.998 - - 0.998 - - - - - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-030219-10]
58. kifc3 ENSDARG00000054978 1220 0.998 - - 0.998 - - - - - - kinesin family member C3 [Source:ZFIN;Acc:ZDB-GENE-030131-3724]
59. dhx38 ENSDARG00000100013 1854 0.998 - - 0.998 - - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Source:ZFIN;Acc:ZDB-GENE-040426-1144]
60. ck2b ck2b 781 0.998 - - 0.998 - - - - - -
61. abi1b ENSDARG00000062991 1564 0.998 - - 0.998 - - - - - - abl-interactor 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1182]
62. bre bre 1233 0.998 - - 0.998 - - - - - -
63. PEG3_5 PEG3_5 1624 0.998 - - 0.998 - - - - - -
64. TACC2 1702 0.998 - - 0.998 - - - - - - transforming, acidic coiled-coil containing protein 2, transcript variant X17
65. fosl2 ENSDARG00000040623 2041 0.997 - - 0.997 - - - - - - fos-like antigen 2 [Source:ZFIN;Acc:ZDB-GENE-070209-164]
66. usp44 ENSDARG00000089861 1532 0.997 - - 0.997 - - - - - - ubiquitin specific peptidase 44 [Source:ZFIN;Acc:ZDB-GENE-040426-774]
67. nat9 ENSDARG00000071425, ENSDARG00000111763 1462 0.997 - - 0.997 - - - - - - N-acetyltransferase 9 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-030131-5097]
68. c8b ENSDARG00000039517 1731 0.997 - - 0.997 - - - - - - complement component 8, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-070912-163]
69. mbtps1 ENSDARG00000014634, ENSDARG00000109507, ENSDARG00000110774 2290 0.997 - - 0.997 - - - - - - membrane-bound transcription factor peptidase, site 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4909]
70. sp3b ENSDARG00000007812 2928 0.997 - - 0.997 - - - - - - Sp3b transcription factor [Source:ZFIN;Acc:ZDB-GENE-110815-3]
71. pip5k1aa ENSDARG00000100396 1644 0.997 - - 0.997 - - - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, a [Source:ZFIN;Acc:ZDB-GENE-050522-517]
72. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 0.997 - - 0.997 - - - - - - integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
73. plekhh1 ENSDARG00000053835 2123 0.996 - - 0.996 - - - - - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
74. coa5 ENSDARG00000094833 1988 0.996 - - 0.996 - - - - - - cytochrome C oxidase assembly factor 5 [Source:ZFIN;Acc:ZDB-GENE-060825-53]
75. numb ENSDARG00000027279 2905 0.996 - - 0.996 - - - - - - numb homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060422-1]
76. txnipb ENSDARG00000070000 2365 0.996 - - 0.996 - - - - - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
77. C3H19orf43 C3H19orf43 2961 0.996 - - 0.996 - - - - - -
78. jph2 ENSDARG00000028625 6706 0.995 - - 0.995 - - - - - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
79. hug 4100 0.995 - - 0.995 - - - - - - HuG, transcript variant X2
80. syngr2a ENSDARG00000052429 3431 0.995 - - 0.995 - - - - - - synaptogyrin 2a [Source:ZFIN;Acc:ZDB-GENE-070112-1292]
81. fscn1a ENSDARG00000059680 3999 0.994 - - 0.994 - - - - - - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
82. uchl3 ENSDARG00000030177, ENSDARG00000109434 2843 0.993 - - 0.993 - - - - - - ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-050522-158]
83. UBE2QL1 ENSDARG00000079276 3474 0.993 - - 0.993 - - - - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
84. sec31a ENSDARG00000021082, ENSDARG00000111434, ENSDARG00000114514 6991 0.992 - - 0.992 - - - - - - SEC31 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-020919-2]
85. skib ENSDARG00000008034 6518 0.991 - - 0.991 - - - - - - v-ski avian sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-990715-10]
86. ATOX1 ENSDARG00000087693 4016 0.99 - - 0.990 - - - - - - antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
87. xpo7 ENSDARG00000005540, ENSDARG00000110221 4566 0.99 - - 0.990 - - - - - - exportin 7 [Source:ZFIN;Acc:ZDB-GENE-060628-2]
88. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 0.99 - - 0.990 - - - - - - sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
89. sp8b ENSDARG00000056666 3988 0.989 - - 0.989 - - - - - - sp8 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-030131-3654]
90. pogza ENSDARG00000054778 1495 0.988 - - 0.988 - - - - - - pogo transposable element derived with ZNF domain a [Source:ZFIN;Acc:ZDB-GENE-040914-76]
91. PLEKHA6 ENSDARG00000020328 2076 0.987 - - 0.987 - - - - - - pleckstrin homology domain containing, family A member 6 [Source:ZFIN;Acc:ZDB-GENE-140106-14]
92. b4galt7 ENSDARG00000021899 546 0.986 - - - - - - - 0.986 - xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-040727-3]
93. si:dkey-82i20.5 ENSDARG00000116717 2965 0.984 - - 0.984 - - - - - - si:dkey-82i20.5 [Source:ZFIN;Acc:ZDB-GENE-110914-101]
94. ing4 ENSDARG00000030716 5908 0.983 - - 0.983 - - - - - - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
95. psma3 ENSDARG00000086618 6200 0.982 - - 0.982 - - - - - - proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
96. hnrnpua ENSDARG00000015206 4012 0.982 - - 0.982 - - - - - - heterogeneous nuclear ribonucleoprotein Ua [Source:ZFIN;Acc:ZDB-GENE-030131-3731]
97. aebp1 ENSDARG00000091726 906 0.981 - - - - - - - 0.981 - AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
98. fkbp7 ENSDARG00000010962 2986 0.981 - - 0.981 - - - - - - FK506 binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-030616-182]
99. elavl3 ENSDARG00000014420 8644 0.979 - - 0.979 - - - - - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
100. PHLDB1 PHLDB1 3821 0.978 - - 0.978 - - - - - -

There are 901 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA