Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-209n20.1

Gene Name Gene ID Reads Annotation
si:ch211-209n20.1 ENSDARG00000099382 2 si:ch211-209n20.1 [Source:ZFIN;Acc:ZDB-GENE-070705-98]










Genes with expression patterns similar to si:ch211-209n20.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-209n20.1 ENSDARG00000099382 2 1 - - 1.000 - - - - - - si:ch211-209n20.1 [Source:ZFIN;Acc:ZDB-GENE-070705-98]
2. BICD1 BICD1 9 0.983 - - 0.983 - - - - - -
3. asap3 ENSDARG00000021896 19 0.959 - - 0.959 - - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-050913-39]
4. itgb2 ENSDARG00000016939 55 0.931 - - 0.931 - - - - - - integrin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-110411-4]
5. zgc:136895 zgc:136895 41 0.914 - - 0.914 - - - - - -
6. VASH1 ENSDARG00000092716 33 0.889 - - 0.889 - - - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
7. crebl2 ENSDARG00000104049 16 0.881 - - 0.881 - - - - - - cAMP responsive element binding protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-456]
8. Metazoa_SRP_20 Metazoa_SRP_20 2 0.881 - - 0.881 - - - - - -
9. si:ch73-189n23.1 ENSDARG00000086247 15 0.881 - - 0.881 - - - - - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
10. sh2d3cb ENSDARG00000104555, ENSDARG00000116530 21 0.881 - - 0.881 - - - - - - SH2 domain containing 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1052]
11. CABZ01023255.1 ENSDARG00000099984 13 0.881 - - 0.881 - - - - - - NACHT, LRR and PYD domains-containing protein 12-like [Source:NCBI gene;Acc:110438218]
12. slc25a29 ENSDARG00000057352 9 0.881 - - 0.881 - - - - - - solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:ZFIN;Acc:ZDB-GENE-050913-70]
13. trpc5b ENSDARG00000060837, ENSDARG00000114021 15 0.881 - - 0.881 - - - - - - transient receptor potential cation channel, subfamily C, member 5b [Source:ZFIN;Acc:ZDB-GENE-091112-24]
14. clcn2 clcn2 13 0.881 - - 0.881 - - - - - -
15. cyp2k17 ENSDARG00000104529 1 0.881 - - 0.881 - - - - - - cytochrome P450, family 2, subfamily K, polypeptide17 [Source:ZFIN;Acc:ZDB-GENE-070424-41]
16. si:dkey-45j10.2 si:dkey-45j10.2 5 0.881 - - 0.881 - - - - - -
17. vav3b ENSDARG00000073713, ENSDARG00000075962 26 0.881 - - 0.881 - - - - - - vav 3 guanine nucleotide exchange factor b [Source:ZFIN;Acc:ZDB-GENE-070912-251]
18. cd44a ENSDARG00000087863 4 0.881 - - 0.881 - - - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
19. CABZ01081904.1 CABZ01081904.1 1 0.881 - - 0.881 - - - - - -
20. si:dkey-85n7.11 si:dkey-85n7.11 2 0.881 - - 0.881 - - - - - -
21. BX569789.2 BX569789.2 12 0.881 - - 0.881 - - - - - -
22. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 0.875 - - 0.875 - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
23. CABZ01056821.2 CABZ01056821.2 5 0.873 - - 0.873 - - - - - -
24. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 0.868 - - 0.868 - - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
25. BX323793.3 BX323793.3 7 0.864 - - 0.864 - - - - - -
26. CABZ01070631.1 ENSDARG00000110183 6 0.864 - - 0.864 - - - - - - F-BAR and double SH3 domains protein 2-like [Source:NCBI gene;Acc:100537850]
27. si:dkey-111b14.2 si:dkey-111b14.2 25 0.864 - - 0.864 - - - - - -
28. plek ENSDARG00000104325 21 0.862 - - 0.862 - - - - - - pleckstrin [Source:ZFIN;Acc:ZDB-GENE-040426-1506]
29. pak1_1 ENSDARG00000103959 28 0.857 - - 0.857 - - - - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
30. hydin ENSDARG00000056764, ENSDARG00000114934 16 0.855 - - 0.855 - - - - - - HYDIN, axonemal central pair apparatus protein [Source:ZFIN;Acc:ZDB-GENE-050419-219]
31. dnah9 ENSDARG00000103383 2 0.84 - - 0.840 - - - - - - dynein, axonemal, heavy chain 9 [Source:ZFIN;Acc:ZDB-GENE-020925-1]
32. BX469910.2 ENSDARG00000096127 6 0.837 - - 0.837 - - - - - -
33. agxta ENSDARG00000052099 65 0.837 - - 0.837 - - - - - - alanine--glyoxylate and serine--pyruvate aminotransferase a [Source:ZFIN;Acc:ZDB-GENE-040718-16]
34. ocstamp ENSDARG00000022139, ENSDARG00000114094 12 0.836 - - 0.836 - - - - - - osteoclast stimulatory transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-050327-65]
35. lppr2a lppr2a 19 0.833 - - 0.833 - - - - - -
36. ube2l3b ENSDARG00000027141 26 0.83 - - 0.830 - - - - - - ubiquitin-conjugating enzyme E2L 3b [Source:ZFIN;Acc:ZDB-GENE-030131-662]
37. CU633740.1 CU633740.1 8 0.83 - - 0.830 - - - - - -
38. zgc:173652_1 4 0.83 - - 0.830 - - - - - - zgc:173652
39. kcnab1 kcnab1 10 0.82 - - 0.820 - - - - - -
40. si:dkey-57h18.2 33 0.815 - - 0.815 - - - - - - si:dkey-57h18.2, transcript variant X1
41. si:dkey-1d7.3 ENSDARG00000075837 18 0.809 - - 0.809 - - - - - - si:dkey-1d7.3 [Source:ZFIN;Acc:ZDB-GENE-091118-46]
42. sumo2a ENSDARG00000104390 4 0.803 - - 0.803 - - - - - - small ubiquitin-like modifier 2a [Source:ZFIN;Acc:ZDB-GENE-120215-155]
43. si:dkey-220a11.9 si:dkey-220a11.9 10 0.8 - - 0.800 - - - - - -
44. zdhhc12a ENSDARG00000076632 13 0.796 - - 0.796 - - - - - - zinc finger, DHHC-type containing 12a [Source:ZFIN;Acc:ZDB-GENE-081104-40]
45. mapk9 ENSDARG00000077364 38 0.794 - - 0.794 - - - - - - mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]
46. kcnh2 kcnh2 76 0.791 - - 0.791 - - - - - -
47. si:ch211-207c7.6 si:ch211-207c7.6 23 0.791 - - 0.791 - - - - - -
48. wisp1a ENSDARG00000054331 26 0.791 - - 0.791 - - - - - - WNT1 inducible signaling pathway protein 1a [Source:ZFIN;Acc:ZDB-GENE-070705-178]
49. pbx3b ENSDARG00000013615, ENSDARG00000110194 11 0.79 - - 0.790 - - - - - - pre-B-cell leukemia homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-000405-3]
50. si:dkey-47k16.4_1 ENSDARG00000113005 5 0.785 - - 0.785 - - - - - - si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131]
51. ankef1b ENSDARG00000060211 12 0.776 - - 0.776 - - - - - - ankyrin repeat and EF-hand domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060810-68]
52. nanog ENSDARG00000075113 10 0.772 - - 0.772 - - - - - - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]
53. NFAT5 NFAT5 62 0.767 - - 0.767 - - - - - -
54. CU459160.1 CU459160.1 104 0.761 - - 0.761 - - - - - -
55. foxp3a ENSDARG00000055750 15 0.755 - - 0.755 - - - - - - forkhead box P3a [Source:ZFIN;Acc:ZDB-GENE-061116-2]
56. CABZ01055343.2_1 CABZ01055343.2_1 6 0.754 - - 0.754 - - - - - -
57. BX323793.4 BX323793.4 8 0.748 - - 0.748 - - - - - -
58. si:ch211-139n6.3 ENSDARG00000093230 147 0.747 - - 0.747 - - - - - - si:ch211-139n6.3 [Source:ZFIN;Acc:ZDB-GENE-041111-114]
59. CT573256.1 ENSDARG00000091657 18 0.735 - - 0.735 - - - - - - serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952]
60. KRT9 KRT9 7 0.731 - - 0.731 - - - - - -
61. BX465203.1 ENSDARG00000113985 8 0.73 - - 0.730 - - - - - -
62. ENSDARG00000063316 ENSDARG00000063316 4 0.73 - - 0.730 - - - - - -
63. GRM8_1 GRM8_1 85 0.73 - - 0.730 - - - - - -
64. zgc:172253 ENSDARG00000074191 5 0.724 - - 0.724 - - - - - - zgc:172253 [Source:ZFIN;Acc:ZDB-GENE-080215-9]
65. CABZ01079551.1 CABZ01079551.1 6 0.716 - - 0.716 - - - - - -
66. CABZ01111953.1 ENSDARG00000099747 38 0.711 - - 0.711 - - - - - - oxysterol-binding protein-related protein 10-like [Source:NCBI gene;Acc:100334085]
67. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 0.71 - - 0.710 - - - - - - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
68. phkg1a ENSDARG00000030604, ENSDARG00000114608 85 0.706 - - 0.706 - - - - - - phosphorylase kinase, gamma 1a (muscle) [Source:ZFIN;Acc:ZDB-GENE-061103-385]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA