Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-209j12.3

Gene Name Gene ID Reads Annotation
si:ch211-209j12.3 ENSDARG00000100568 2 si:ch211-209j12.3 [Source:ZFIN;Acc:ZDB-GENE-120709-21]










Genes with expression patterns similar to si:ch211-209j12.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-209j12.3 ENSDARG00000100568 2 2 - - 1.000 - - - - - 1.000 si:ch211-209j12.3 [Source:ZFIN;Acc:ZDB-GENE-120709-21]
2. mhc1zca ENSDARG00000069471 21 1 - - - - - - - - 1.000 major histocompatibility complex class I ZCA [Source:ZFIN;Acc:ZDB-GENE-070424-4]
3. CR392364.1 CR392364.1 1 1 - - - - - - - - 1.000
4. cnn1a ENSDARG00000017193 6 1 - - - - - - - - 1.000 calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
5. cryabb ENSDARG00000101380, ENSDARG00000109545 8 1 - - - - - - - - 1.000 crystallin, alpha B, b [Source:ZFIN;Acc:ZDB-GENE-040718-419]
6. RGS14 RGS14 15 1 - - - - - - - - 1.000
7. NOX4 3 1 - - - - - - - - 1.000 NADPH oxidase 4
8. lhfpl5b ENSDARG00000056458, ENSDARG00000111760 1 1 - - - - - - - - 1.000 LHFPL tetraspan subfamily member 5b [Source:ZFIN;Acc:ZDB-GENE-080220-51]
9. CABZ01067080.1 ENSDARG00000109240 1 1 - - - - - - - - 1.000 interferon-induced very large GTPase 1-like [Source:NCBI gene;Acc:101883914]
10. CABZ01073099.1 CABZ01073099.1 1 1 - - - - - - - - 1.000
11. si:dkey-49n23.3 ENSDARG00000095325 4 1 - - - - - - - - 1.000 si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
12. MYO15B ENSDARG00000074852 6 1 - - - - - - - - 1.000 myosin XVB [Source:ZFIN;Acc:ZDB-GENE-030131-4797]
13. nexn_1 ENSDARG00000057317 1 1 - - - - - - - - 1.000 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
14. C18H15orf48 C18H15orf48 3 1 - - - - - - - - 1.000
15. GCNT4 GCNT4 66 1 - - - - - - - - 1.000
16. CU571333.2 CU571333.2 1 1 - - - - - - - - 1.000
17. SLITRK1 2 1 - - - - - - - - 1.000 SLIT and NTRK like family member 1
18. chia.4 ENSDARG00000008541 14 0.993 - - - - - - - - 0.993 chitinase, acidic.4 [Source:ZFIN;Acc:ZDB-GENE-030131-9279]
19. gig2n gig2n 5 0.991 - - - - - - - - 0.991
20. spire2 ENSDARG00000003084 6 0.974 - - - - - - - - 0.974 spire-type actin nucleation factor 2 [Source:ZFIN;Acc:ZDB-GENE-041114-29]
21. si:ch211-200o1.1 si:ch211-200o1.1 2 0.972 - - - - - - - - 0.972
22. ZNF135 ZNF135 14 0.972 - - - - - - - - 0.972
23. KBTBD11 ENSDARG00000104958 8 0.971 - - - - - - - - 0.971 kelch repeat and BTB (POZ) domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-130530-678]
24. BX537305.1 ENSDARG00000113834 10 0.966 - - - - - - - - 0.966
25. zgc:173652 22 0.959 - - - - - - - - 0.959 zgc:173652
26. si:dkey-30j10.5 ENSDARG00000093186 13 0.953 - - - - - - - - 0.953 si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
27. slc7a14b ENSDARG00000079231 6 0.936 - - - - - - - - 0.936 solute carrier family 7, member 14b [Source:ZFIN;Acc:ZDB-GENE-091113-47]
28. zgc:171506 ENSDARG00000078206, ENSDARG00000112252 3 0.93 - - - - - - - - 0.930 zgc:171506 [Source:ZFIN;Acc:ZDB-GENE-080204-96]
29. si:dkeyp-75d2.5 si:dkeyp-75d2.5 21 0.922 - - - - - - - - 0.922
30. FAM177A1 ENSDARG00000079636 19 0.919 - - 0.919 - - - - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
31. si:ch211-271g18.4 ENSDARG00000115564 197 0.911 - - - - - - - - 0.911 si:ch211-271g18.4 [Source:ZFIN;Acc:ZDB-GENE-110914-58]
32. TNFRSF14_3 TNFRSF14_3 135 0.904 - - - - - - - - 0.904
33. cpne5 cpne5 16 0.897 - - - - - - - - 0.897
34. CR848814.2 CR848814.2 19 0.889 - - - - - - - - 0.889
35. tg ENSDARG00000020084 40 0.873 - - - - - - - - 0.873 thyroglobulin [Source:ZFIN;Acc:ZDB-GENE-030519-1]
36. sgms2 57 0.869 - - - - - - - - 0.869 sphingomyelin synthase 2, transcript variant X1
37. CD109 ENSDARG00000060609 34 0.868 - - 0.868 - - - - - - CD109 molecule [Source:ZFIN;Acc:ZDB-GENE-120215-253]
38. lyve1b ENSDARG00000062483 14 0.866 - - - - - - - - 0.866 lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
39. bcan ENSDARG00000099412 18 0.86 - - 0.860 - - - - - - brevican [Source:ZFIN;Acc:ZDB-GENE-030131-6045]
40. slco4a1 ENSDARG00000075948 74 0.857 - - - - - - - - 0.857 solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
41. zgc:174642_2 zgc:174642_2 1 0.855 - - 0.855 - - - - - -
42. rac1l ENSDARG00000054649, ENSDARG00000096549 2 0.855 - - 0.855 - - - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
43. si:dkey-4p15.5 ENSDARG00000086272 7 0.855 - - 0.855 - - - - - - si:dkey-4p15.5 [Source:ZFIN;Acc:ZDB-GENE-121214-193]
44. si:rp71-20i5.5 si:rp71-20i5.5 9 0.855 - - 0.855 - - - - - -
45. CABZ01087111.1 CABZ01087111.1 42 0.855 - - 0.855 - - - - - -
46. csf3r ENSDARG00000045959 4 0.855 - - 0.855 - - - - - - colony stimulating factor 3 receptor (granulocyte) [Source:ZFIN;Acc:ZDB-GENE-080104-4]
47. hsf5 ENSDARG00000104686 9 0.855 - - 0.855 - - - - - - heat shock transcription factor family member 5 [Source:ZFIN;Acc:ZDB-GENE-070410-42]
48. ttc6 ENSDARG00000104125 7 0.855 - - 0.855 - - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
49. pcdh2g12 5 0.855 - - 0.855 - - - - - - protocadherin 2 gamma 12
50. GARNL3 GARNL3 1 0.855 - - 0.855 - - - - - -
51. mir124-1 10 0.855 - - 0.855 - - - - - - microRNA 124-1
52. CU468041.1 ENSDARG00000092125 1 0.855 - - 0.855 - - - - - -
53. gata2b ENSDARG00000009094 16 0.855 - - 0.855 - - - - - - GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440]
54. si:dkey-191j3.2 ENSDARG00000101997 1 0.855 - - 0.855 - - - - - - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
55. BX572103.3 BX572103.3 0 0.855 - - 0.855 - - - - - -
56. BX927253.1 ENSDARG00000096072 1 0.855 - - 0.855 - - - - - -
57. kcnq3 ENSDARG00000060085 0 0.855 - - 0.855 - - - - - - potassium voltage-gated channel, KQT-like subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-301]
58. abcg2a ENSDARG00000100075 2 0.855 - - 0.855 - - - - - - ATP-binding cassette, sub-family G (WHITE), member 2a [Source:ZFIN;Acc:ZDB-GENE-050517-35]
59. ANO2 ENSDARG00000101363 1 0.855 - - 0.855 - - - - - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
60. si:dkey-211e20.3 si:dkey-211e20.3 1 0.855 - - 0.855 - - - - - -
61. syne2a_1 0 0.855 - - 0.855 - - - - - - spectrin repeat containing, nuclear envelope 2a
62. STOX2 STOX2 0 0.855 - - 0.855 - - - - - -
63. si:ch73-36i7.2 si:ch73-36i7.2 5 0.855 - - 0.855 - - - - - -
64. tyro3 ENSDARG00000005356 4 0.855 - - 0.855 - - - - - - TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
65. pou4f3 ENSDARG00000006206 8 0.855 - - 0.855 - - - - - - POU class 4 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-24]
66. zgc:162322 zgc:162322 1 0.855 - - 0.855 - - - - - -
67. slc2a11l ENSDARG00000062873 1 0.855 - - 0.855 - - - - - - solute carrier family 2 (facilitated glucose transporter), member 11-like [Source:ZFIN;Acc:ZDB-GENE-061215-118]
68. SLC4A3 ENSDARG00000104005 2 0.855 - - 0.855 - - - - - - solute carrier family 4 (anion exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-141006-1]
69. si:ch211-201b11.3 si:ch211-201b11.3 2 0.855 - - 0.855 - - - - - -
70. si:rp71-7l19.7 si:rp71-7l19.7 1 0.855 - - 0.855 - - - - - -
71. 5S_rRNA_10 5S_rRNA_10 2 0.855 - - 0.855 - - - - - -
72. CU695076.1 CU695076.1 7 0.855 - - 0.855 - - - - - -
73. hbaa2 ENSDARG00000069735 10 0.855 - - 0.855 - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
74. SNORA53 SNORA53 10 0.855 - - 0.855 - - - - - -
75. b3gnt9 ENSDARG00000041616 0 0.855 - - 0.855 - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060503-611]
76. INPP5A 1 0.855 - - 0.855 - - - - - - inositol polyphosphate-5-phosphatase A
77. prokr1a ENSDARG00000074182 2 0.855 - - 0.855 - - - - - - prokineticin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-110411-180]
78. zgc:114037_5 6 0.855 - - 0.855 - - - - - - zgc:114037
79. mir150 ENSDARG00000081593 4 0.855 - - 0.855 - - - - - - microRNA 150 [Source:NCBI gene;Acc:100033674]
80. si:ch211-285c6.2 ENSDARG00000079234 1 0.855 - - 0.855 - - - - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
81. si:ch211-276k2.2 4 0.855 - - 0.855 - - - - - - si:ch211-276k2.2
82. CR855307.2 CR855307.2 1 0.855 - - 0.855 - - - - - -
83. CCDC171 ENSDARG00000027381 3 0.855 - - 0.855 - - - - - - coiled-coil domain containing 171 [Source:ZFIN;Acc:ZDB-GENE-110411-270]
84. BEGAIN_1 BEGAIN_1 7 0.855 - - 0.855 - - - - - -
85. si:dkey-21o19.6 si:dkey-21o19.6 18 0.855 - - 0.855 - - - - - -
86. U4_1 U4_1 2 0.855 - - 0.855 - - - - - -
87. CABZ01072856.1 CABZ01072856.1 0 0.855 - - 0.855 - - - - - -
88. CABZ01012080.1 CABZ01012080.1 10 0.855 - - 0.855 - - - - - -
89. zgc:171759_1 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 1 0.855 - - 0.855 - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
90. ralgps1 ENSDARG00000068370 39 0.855 - - 0.855 - - - - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16]
91. fsd1l ENSDARG00000059432, ENSDARG00000113444, ENSDARG00000114848 3 0.855 - - 0.855 - - - - - - fibronectin type III and SPRY domain containing 1-like [Source:ZFIN;Acc:ZDB-GENE-070501-9]
92. asb13a.2 ENSDARG00000045765, ENSDARG00000109879 8 0.855 - - 0.855 - - - - - - ankyrin repeat and SOCS box containing 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041210-88]
93. U1_7 U1_7 0 0.855 - - 0.855 - - - - - -
94. mxd ENSDARG00000023369 8 0.855 - - 0.855 - - - - - - myxovirus (influenza virus) resistance D [Source:ZFIN;Acc:ZDB-GENE-030721-8]
95. si:dkeyp-117h8.10 si:dkeyp-117h8.10 16 0.855 - - 0.855 - - - - - -
96. PSKH2 PSKH2 1 0.855 - - 0.855 - - - - - -
97. PEG3_36 PEG3_36 3 0.855 - - 0.855 - - - - - -
98. panx3 ENSDARG00000004627 7 0.855 - - 0.855 - - - - - - pannexin 3 [Source:ZFIN;Acc:ZDB-GENE-091204-114]
99. sox32 ENSDARG00000100591 2 0.855 - - 0.855 - - - - - - SRY (sex determining region Y)-box 32 [Source:ZFIN;Acc:ZDB-GENE-011026-1]
100. PEG3_14 PEG3_14 2 0.855 - - 0.855 - - - - - -

There are 118 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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