Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-209j12.1

Gene Name Gene ID Reads Annotation
si:ch211-209j12.1 ENSDARG00000101634 2 si:ch211-209j12.1 [Source:ZFIN;Acc:ZDB-GENE-120709-44]










Genes with expression patterns similar to si:ch211-209j12.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-209j12.1 ENSDARG00000101634 2 2 - - - - - - - 1.000 1.000 si:ch211-209j12.1 [Source:ZFIN;Acc:ZDB-GENE-120709-44]
2. crhr1 ENSDARG00000003989 5 1.571 - - - - - - - 0.747 0.824 corticotropin releasing hormone receptor 1 [Source:ZFIN;Acc:ZDB-GENE-081231-1]
3. si:dkeyp-118h3.7 si:dkeyp-118h3.7 1 1 - - - - - - - - 1.000
4. scn1a_1 2 1 - - - - - - - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
5. KHNYN ENSDARG00000092488 10 1 - - - - - - - - 1.000 KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
6. col6a3_1 ENSDARG00000077139, ENSDARG00000095915 2 1 - - - - - - - - 1.000 collagen, type VI, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070501-8]
7. rab3da ENSDARG00000018107 28 1 - - - - - - - - 1.000 RAB3D, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-080722-14]
8. pxn pxn 10 1 - - - - - - - - 1.000
9. FAM149A ENSDARG00000073709 7 1 - - - - - - - - 1.000 family with sequence similarity 149 member A [Source:ZFIN;Acc:ZDB-GENE-081107-36]
10. CR847844.5 CR847844.5 5 1 - - - - - - - - 1.000
11. zgc:112965 ENSDARG00000007787 5 1 - - - - - - - - 1.000 zgc:112965 [Source:ZFIN;Acc:ZDB-GENE-050522-10]
12. lrguk ENSDARG00000069698 5 1 - - - - - - - - 1.000 leucine-rich repeats and guanylate kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-232]
13. si:dkey-11f14.2 si:dkey-11f14.2 2 1 - - - - - - - - 1.000
14. ftr53 ENSDARG00000041220, ENSDARG00000110329, ENSDARG00000110400, ENSDARG00000116082 18 1 - - - - - - - - 1.000 finTRIM family, member 53 [Source:ZFIN;Acc:ZDB-GENE-030616-515]
15. tmprss3a ENSDARG00000053315 5 1 - - - - - - - - 1.000 transmembrane serine protease 3a [Source:ZFIN;Acc:ZDB-GENE-070912-70]
16. ARHGAP21 ARHGAP21 1 1 - - - - - - - - 1.000
17. manba_1 ENSDARG00000008238 8 1 - - - - - - - - 1.000 mannosidase, beta A, lysosomal [Source:ZFIN;Acc:ZDB-GENE-040426-721]
18. si:dkey-40h20.1 ENSDARG00000095252 5 0.998 - - - - - - - - 0.998 si:dkey-40h20.1 [Source:ZFIN;Acc:ZDB-GENE-091113-44]
19. C2CD4C_1 C2CD4C_1 24 0.995 - - - - - - - 0.995 -
20. arhgap30 arhgap30 6 0.993 - - - - - - - - 0.993
21. gpr176 ENSDARG00000042515 5 0.979 - - - - - - - - 0.979 G protein-coupled receptor 176 [Source:ZFIN;Acc:ZDB-GENE-041001-183]
22. RNH1_2 RNH1_2 12 0.978 - - - - - - - - 0.978
23. CABZ01049058.1 CABZ01049058.1 7 0.978 - - - - - - - - 0.978
24. CABZ01109624.1 CABZ01109624.1 25 0.964 - - - - - - - - 0.964
25. si:ch211-113a14.19 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 22 0.963 - - - - - - - - 0.963 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
26. H2AFX_1 H2AFX_1 28 0.948 - - - - - - - - 0.948
27. zp3b ENSDARG00000039828 15 0.947 - - - - - - - - 0.947 zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
28. TMEM240 TMEM240 13 0.947 - - - - - - - - 0.947
29. n6amt2 7 0.943 - - - - - - - - 0.943 N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
30. large 9 0.938 - - - - - - - - 0.938 like-glycosyltransferase, transcript variant X1
31. CT027835.1 CT027835.1 2 0.932 - - - - - - - 0.932 -
32. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 0.931 - - - - - - - - 0.931 potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
33. plscr3a ENSDARG00000093078 7 0.923 - - - - - - - - 0.923 phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
34. MTMR3 ENSDARG00000093364, ENSDARG00000098201 11 0.911 - - - - - - - - 0.911 myotubularin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-091204-465]
35. trim54 ENSDARG00000029907 10 0.904 - - - - - - - - 0.904 tripartite motif containing 54 [Source:ZFIN;Acc:ZDB-GENE-041014-342]
36. nkx2.1a nkx2.1a 156 0.904 - - - - - - - 0.904 -
37. si:dkey-14d8.6 ENSDARG00000045835 72 0.901 - - - - - - - - 0.901 si:dkey-14d8.6 [Source:ZFIN;Acc:ZDB-GENE-041210-124]
38. CCDC88A_1 CCDC88A_1 12 0.89 - - - - - - - 0.890 -
39. crybb3 ENSDARG00000041301 48 0.885 - - - - - - - - 0.885 crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
40. pax6l pax6l 54 0.881 - - - - - - - 0.881 -
41. si:dkey-21o19.2 ENSDARG00000088900 52 0.877 - - - - - - - 0.877 - si:dkey-21o19.2 [Source:ZFIN;Acc:ZDB-GENE-090313-241]
42. FAM150A 14 0.866 - - - - - - - 0.866 - family with sequence similarity 150 member A, transcript variant X2
43. vax2 ENSDARG00000058702 175 0.856 - - - - - - - 0.856 - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
44. klc1a ENSDARG00000009796 10 0.854 - - - - - - - - 0.854 kinesin light chain 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1599]
45. cart4 ENSDARG00000070142 55 0.853 - - - - - - - 0.853 - cocaine- and amphetamine-regulated transcript 4 [Source:ZFIN;Acc:ZDB-GENE-060503-863]
46. flnb ENSDARG00000092281 10 0.842 - - - - - - - - 0.842 filamin B, beta (actin binding protein 278) [Source:ZFIN;Acc:ZDB-GENE-041026-1]
47. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 0.841 - - - - - - - 0.841 - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
48. pou3f3b ENSDARG00000095896 3 0.828 - - - - - - - 0.828 - POU class 3 homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-980526-140]
49. zgc:114037_1 10 0.828 - - - - - - - 0.828 - zgc:114037
50. grin1b ENSDARG00000025728 4 0.828 - - - - - - - 0.828 - glutamate receptor, ionotropic, N-methyl D-aspartate 1b [Source:ZFIN;Acc:ZDB-GENE-051202-2]
51. sparcl1 ENSDARG00000074989 80 0.827 - - - - - - - 0.827 - SPARC-like 1 [Source:ZFIN;Acc:ZDB-GENE-060130-6]
52. mmp13a ENSDARG00000012395, ENSDARG00000114451 178 0.826 - - - - - - - - 0.826 matrix metallopeptidase 13a [Source:ZFIN;Acc:ZDB-GENE-031202-2]
53. six7 ENSDARG00000070107 140 0.822 - - - - - - - 0.822 - SIX homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-990825-28]
54. SERINC4 ENSDARG00000044815 45 0.818 - - - - - - - 0.818 - serine incorporator 4 [Source:ZFIN;Acc:ZDB-GENE-121031-1]
55. trh ENSDARG00000006868 31 0.817 - - - - - - - 0.817 - thyrotropin-releasing hormone [Source:ZFIN;Acc:ZDB-GENE-020930-1]
56. lim2.1 ENSDARG00000068974, ENSDARG00000114525 233 0.816 - - - - - - - 0.816 - lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]
57. lctlb ENSDARG00000016337 35 0.816 - - - - - - - 0.816 - lactase-like b [Source:ZFIN;Acc:ZDB-GENE-060503-93]
58. crygm2d13 ENSDARG00000057460 1093 0.815 - - - - - - - 0.815 - crystallin, gamma M2d13 [Source:ZFIN;Acc:ZDB-GENE-040718-105]
59. KCNS1 KCNS1 24 0.814 - - - - - - - - 0.814
60. pmchl ENSDARG00000076978 3 0.809 - - - - - - - 0.809 - pro-melanin-concentrating hormone, like [Source:ZFIN;Acc:ZDB-GENE-030131-7863]
61. zgc:92658 8 0.809 - - - - - - - 0.809 - zgc:92658
62. U1_25 U1_25 283 0.807 - - - - - - - 0.807 -
63. tmx3 5 0.803 - - - - - - - 0.803 - thioredoxin-related transmembrane protein 3
64. pcdh8 ENSDARG00000006467 317 0.802 - - - - - - - 0.802 - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
65. lim2.5 ENSDARG00000041295 56 0.801 - - - - - - - 0.801 - lens intrinsic membrane protein 2.5 [Source:ZFIN;Acc:ZDB-GENE-050320-94]
66. lim2.4 ENSDARG00000015445 791 0.799 - - - - - - - 0.799 - lens intrinsic membrane protein 2.4 [Source:ZFIN;Acc:ZDB-GENE-040718-104]
67. si:ch211-259i2.2 si:ch211-259i2.2 45 0.796 - - - - - - - - 0.796
68. crygm2d12 ENSDARG00000069801, ENSDARG00000113681 394 0.794 - - - - - - - 0.794 - crystallin, gamma M2d12 [Source:ZFIN;Acc:ZDB-GENE-070822-19]
69. ugt5c2 ENSDARG00000006372 11 0.794 - - - - - - - 0.794 - UDP glucuronosyltransferase 5 family, polypeptide C2 [Source:ZFIN;Acc:ZDB-GENE-060825-206]
70. vax1 ENSDARG00000021916, ENSDARG00000114230 152 0.791 - - - - - - - 0.791 - ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
71. si:dkey-261l7.2 ENSDARG00000094345 51 0.791 - - - - - - - 0.791 - si:dkey-261l7.2 [Source:ZFIN;Acc:ZDB-GENE-090313-288]
72. cx50.5 cx50.5 15 0.789 - - - - - - - 0.789 -
73. crygm2d7 ENSDARG00000076572, ENSDARG00000116634 229 0.788 - - - - - - - 0.788 - crystallin, gamma M2d7 [Source:ZFIN;Acc:ZDB-GENE-060918-5]
74. cryba1l2 ENSDARG00000014803 47 0.788 - - - - - - - 0.788 - crystallin, beta A1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-40]
75. lim2.3 ENSDARG00000037402 302 0.787 - - - - - - - 0.787 - lens intrinsic membrane protein 2.3 [Source:ZFIN;Acc:ZDB-GENE-040718-327]
76. crygm2d16 ENSDARG00000076790 129 0.786 - - - - - - - 0.786 - crystallin, gamma M2d16 [Source:ZFIN;Acc:ZDB-GENE-071004-53]
77. crygmxl2 ENSDARG00000074001 282 0.785 - - - - - - - 0.785 - crystallin, gamma MX, like 2 [Source:ZFIN;Acc:ZDB-GENE-050522-401]
78. si:dkey-43b14.8 35 0.783 - - - - - - - 0.783 - si:dkey-43b14.8
79. zgc:171531 zgc:171531 77 0.782 - - - - - - - 0.782 -
80. crx ENSDARG00000011989, ENSDARG00000113850 330 0.78 - - - - - - - 0.780 - cone-rod homeobox [Source:ZFIN;Acc:ZDB-GENE-010403-1]
81. rorb ENSDARG00000033498 544 0.779 - - - - - - - 0.779 - RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]
82. DHX32 DHX32 181 0.778 - - - - - - - 0.778 -
83. cryba2a ENSDARG00000030349 1342 0.777 - - - - - - - 0.777 - crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
84. oprk1 ENSDARG00000006894 43 0.776 - - - - - - - 0.776 - opioid receptor, kappa 1 [Source:ZFIN;Acc:ZDB-GENE-030729-1]
85. ahr1b ENSDARG00000023537 44 0.774 - - - - - - - 0.774 - aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
86. cx44.1 cx44.1 799 0.773 - - - - - - - 0.773 -
87. mipa ENSDARG00000037285, ENSDARG00000116133 507 0.773 - - - - - - - 0.773 - major intrinsic protein of lens fiber a [Source:ZFIN;Acc:ZDB-GENE-040801-41]
88. cryba2b ENSDARG00000041925 4329 0.77 - - - - - - - 0.770 - crystallin, beta A2b [Source:ZFIN;Acc:ZDB-GENE-040718-324]
89. crygm2d9 ENSDARG00000115701 28 0.769 - - - - - - - 0.769 - crystallin, gamma M2d9 [Source:ZFIN;Acc:ZDB-GENE-081105-81]
90. slc37a1 ENSDARG00000086103 16 0.768 - - - - - - - - 0.768 solute carrier family 37 (glucose-6-phosphate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-041114-151]
91. mipb ENSDARG00000013963 753 0.764 - - - - - - - 0.764 - major intrinsic protein of lens fiber b [Source:ZFIN;Acc:ZDB-GENE-050706-86]
92. zgc:86723 zgc:86723 299 0.763 - - - - - - - 0.763 -
93. edil3 edil3 24 0.757 - - - - - - - - 0.757
94. mgp ENSDARG00000086189 9 0.757 - - - - - - - - 0.757 matrix Gla protein [Source:ZFIN;Acc:ZDB-GENE-060928-1]
95. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 0.757 - - - - - - - 0.757 - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
96. crygm2d8 ENSDARG00000116164 698 0.756 - - - - - - - 0.756 - crystallin, gamma M2d8 [Source:ZFIN;Acc:ZDB-GENE-040718-321]
97. crybb1l2 ENSDARG00000016793 723 0.755 - - - - - - - 0.755 - crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
98. crygm2d14 ENSDARG00000087301 66 0.755 - - - - - - - 0.755 - crystallin, gamma M2d14 [Source:ZFIN;Acc:ZDB-GENE-070822-20]
99. CR391967.1 CR391967.1 135 0.752 - - - - - - - 0.752 -
100. cryba1l1 ENSDARG00000032929 1868 0.751 - - - - - - - 0.751 - crystallin, beta A1, like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-249]

There are 82 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA