Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-209j10.6

Gene Name Gene ID Reads Annotation
si:ch211-209j10.6 ENSDARG00000093317 126 si:ch211-209j10.6 [Source:ZFIN;Acc:ZDB-GENE-090311-44]










Genes with expression patterns similar to si:ch211-209j10.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-209j10.6 ENSDARG00000093317 126 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-209j10.6 [Source:ZFIN;Acc:ZDB-GENE-090311-44]
2. SLC2A13 SLC2A13 74 1.703 - 0.914 - - - - 0.789 - -
3. CABZ01069022.1 ENSDARG00000105692 16 1.697 0.838 0.859 - - - - - - - si:cabz01069022.1 [Source:NCBI gene;Acc:100332864]
4. RCVRN RCVRN 66 1.688 0.829 0.859 - - - - - - -
5. CU929036.1 CU929036.1 7 1.683 0.824 0.859 - - - - - - -
6. robo1 ENSDARG00000026784 125 1.648 0.798 0.850 - - - - - - - roundabout, axon guidance receptor, homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000209-3]
7. tnip1 ENSDARG00000015653 94 1.644 0.801 0.843 - - - - - - - TNFAIP3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1502]
8. si:ch211-223a21.3 ENSDARG00000104737 28 1.629 - 0.894 - - - 0.735 - - - si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
9. MFAP4 ENSDARG00000090783 8 1.625 - - - - 0.918 - - 0.707 - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
10. sertad2a ENSDARG00000093412 503 1.616 - 0.791 - - - - 0.825 - - SERTA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050309-236]
11. inpp5e ENSDARG00000103926 567 1.608 - 0.816 - - - - - - 0.792 inositol polyphosphate-5-phosphatase E [Source:ZFIN;Acc:ZDB-GENE-050809-23]
12. EHD2 EHD2 23 1.603 - - - - - 0.853 0.750 - -
13. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 1.595 0.824 - - - - - - 0.771 -
14. zgc:171220 ENSDARG00000102959 164 1.595 - 0.859 - - - 0.736 - - - zgc:171220 [Source:ZFIN;Acc:ZDB-GENE-071004-11]
15. fam193a ENSDARG00000102787 617 1.594 - 0.834 - - - 0.760 - - - family with sequence similarity 193, member A [Source:ZFIN;Acc:ZDB-GENE-080917-25]
16. trpc1 ENSDARG00000061203 62 1.584 - - - - - 0.869 0.715 - - transient receptor potential cation channel, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-070830-1]
17. anapc4 ENSDARG00000032237 385 1.582 0.848 0.734 - - - - - - - anaphase promoting complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-041212-10]
18. mvb12ba ENSDARG00000091619 18 1.574 - - - - 0.871 - 0.703 - - multivesicular body subunit 12Ba [Source:ZFIN;Acc:ZDB-GENE-060929-372]
19. mir34 176 1.573 0.841 0.732 - - - - - - - microRNA 34
20. si:dkey-103d23.5 26 1.559 - 0.843 - - - - - 0.716 - si:dkey-103d23.5
21. si:ch73-382f3.1 ENSDARG00000093833 295 1.546 - 0.704 - - - 0.842 - - - si:ch73-382f3.1 [Source:ZFIN;Acc:ZDB-GENE-030131-9513]
22. wdr47a ENSDARG00000078136 522 1.539 0.801 0.738 - - - - - - - WD repeat domain 47a [Source:ZFIN;Acc:ZDB-GENE-070216-3]
23. haus6 ENSDARG00000101652 336 1.539 0.705 0.834 - - - - - - - HAUS augmin-like complex, subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5517]
24. enthd2 481 1.533 - 0.823 - - - 0.710 - - - ENTH domain containing 2
25. CCDC71 CCDC71 2442 1.514 - 0.782 - - - 0.732 - - -
26. shrprbck1r ENSDARG00000059871 362 1.509 0.750 - - - - - 0.759 - - sharpin and rbck1 related [Source:ZFIN;Acc:ZDB-GENE-080220-52]
27. ttll2 ENSDARG00000077853 9 1.508 - 0.773 - - - 0.735 - - - tubulin tyrosine ligase-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-297]
28. nek8 ENSDARG00000045626, ENSDARG00000117017 67 1.492 - - - - - 0.724 - - 0.768 NIMA-related kinase 8 [Source:ZFIN;Acc:ZDB-GENE-020509-1]
29. ulk1b ENSDARG00000074481 1212 1.488 - - - - - 0.703 0.785 - - unc-51 like autophagy activating kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071203-2]
30. glrx2 ENSDARG00000100944, ENSDARG00000110094 151 1.48 - 0.722 - - - 0.758 - - - glutaredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040718-101]
31. vstm4a ENSDARG00000010154 129 1.472 0.749 0.723 - - - - - - - V-set and transmembrane domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-060810-69]
32. usp30 ENSDARG00000056842 178 1.472 0.752 0.720 - - - - - - - ubiquitin specific peptidase 30 [Source:ZFIN;Acc:ZDB-GENE-060526-335]
33. CU302376.1 CU302376.1 141 1.471 0.720 0.751 - - - - - - -
34. CAPN1_1 ENSDARG00000055338 288 1.471 - - - - - 0.750 0.721 - - calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]
35. nlrx1 ENSDARG00000073724 286 1.469 0.737 0.732 - - - - - - - NLR family member X1 [Source:ZFIN;Acc:ZDB-GENE-071119-3]
36. CR457441.2 CR457441.2 82 1.431 0.701 - - - - 0.730 - - -
37. mir301c 84 1.404 - - - - - - 0.703 - 0.701 microRNA 301c
38. top1 ENSDARG00000086775 8 1 - - - - 1.000 - - - - DNA topoisomerase I [Source:ZFIN;Acc:ZDB-GENE-030131-5390]
39. si:ch211-202n12.2 ENSDARG00000096665 4 1 - - - - 1.000 - - - - si:ch211-202n12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-12]
40. si:dkey-283b1.7 ENSDARG00000053460 10 1 - - - - 1.000 - - - - si:dkey-283b1.7 [Source:ZFIN;Acc:ZDB-GENE-120215-126]
41. CU856140.1 CU856140.1 4316 1 - - - - 1.000 - - - -
42. CD37 ENSDARG00000075515, ENSDARG00000111538 11 1 - - - - 1.000 - - - - CD37 molecule [Source:ZFIN;Acc:ZDB-GENE-070820-17]
43. si:ch211-254n4.1 si:ch211-254n4.1 36 1 - - - - 1.000 - - - -
44. cryabb ENSDARG00000101380, ENSDARG00000109545 8 1 - - - - 1.000 - - - - crystallin, alpha B, b [Source:ZFIN;Acc:ZDB-GENE-040718-419]
45. CABZ01041604.1 ENSDARG00000059854 35 1 - - - - 1.000 - - - - E3 ubiquitin-protein ligase RNF182-like [Source:NCBI gene;Acc:797048]
46. fmnl2a ENSDARG00000012586 136 0.949 - 0.949 - - - - - - - formin-like 2a [Source:ZFIN;Acc:ZDB-GENE-081105-70]
47. si:dkey-7c18.24 ENSDARG00000041433, ENSDARG00000113434, ENSDARG00000116523 89 0.948 - 0.948 - - - - - - - si:dkey-7c18.24 [Source:ZFIN;Acc:ZDB-GENE-041014-63]
48. syt1a ENSDARG00000030614 542 0.942 - 0.942 - - - - - - - synaptotagmin Ia [Source:ZFIN;Acc:ZDB-GENE-040718-165]
49. ppp6r2b ENSDARG00000069654 323 0.939 - 0.939 - - - - - - - protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
50. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 0.936 - 0.936 - - - - - - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
51. C22H19orf10_1 C22H19orf10_1 30 0.936 - 0.936 - - - - - - -
52. si:dkey-50i6.5 ENSDARG00000101320 95 0.936 - 0.936 - - - - - - - si:dkey-50i6.5 [Source:ZFIN;Acc:ZDB-GENE-081031-53]
53. METTL4 ENSDARG00000088999 160 0.934 - - - - - 0.934 - - - methyltransferase like 4 [Source:ZFIN;Acc:ZDB-GENE-130129-2]
54. ARSJ ENSDARG00000077590 684 0.931 - 0.931 - - - - - - - arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
55. KCNK3 KCNK3 115 0.931 - 0.931 - - - - - - -
56. BX004890.2 BX004890.2 84 0.927 - 0.927 - - - - - - -
57. atp11a ENSDARG00000008413 742 0.924 - 0.924 - - - - - - - ATPase phospholipid transporting 11A [Source:ZFIN;Acc:ZDB-GENE-090311-52]
58. CT956064.4 CT956064.4 541 0.918 - 0.918 - - - - - - -
59. COL23A1 COL23A1 461 0.913 - 0.913 - - - - - - -
60. sphkap ENSDARG00000017429 60 0.912 - - - - - 0.912 - - - SPHK1 interactor, AKAP domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-32]
61. golim4a ENSDARG00000100977, ENSDARG00000106760, ENSDARG00000113393 144 0.912 - 0.912 - - - - - - - golgi integral membrane protein 4a [Source:ZFIN;Acc:ZDB-GENE-041026-2]
62. bmi1b ENSDARG00000013076 1020 0.91 - - - - - 0.910 - - - bmi1 polycomb ring finger oncogene 1b [Source:ZFIN;Acc:ZDB-GENE-040116-4]
63. cart4 ENSDARG00000070142 55 0.908 - - - - 0.908 - - - - cocaine- and amphetamine-regulated transcript 4 [Source:ZFIN;Acc:ZDB-GENE-060503-863]
64. wasa ENSDARG00000015149 26 0.907 - 0.907 - - - - - - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) a [Source:ZFIN;Acc:ZDB-GENE-081104-419]
65. NSUN6 ENSDARG00000103478 29 0.907 - 0.907 - - - - - - - NOL1/NOP2/Sun domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080808-8]
66. si:ch211-181p13.2 ENSDARG00000096484 94 0.906 - 0.906 - - - - - - - si:ch211-181p13.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9054]
67. zbtb3 ENSDARG00000036235 155 0.905 - 0.905 - - - - - - - zinc finger and BTB domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050506-105]
68. taf12 ENSDARG00000104030, ENSDARG00000115004 163 0.904 - 0.904 - - - - - - - TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-031030-5]
69. phactr3a ENSDARG00000058243 150 0.902 - 0.902 - - - - - - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
70. si:dkey-10p5.7 26 0.902 - 0.902 - - - - - - - si:dkey-10p5.7
71. toporsa ENSDARG00000037260 149 0.901 0.901 - - - - - - - - topoisomerase I binding, arginine/serine-rich a [Source:ZFIN;Acc:ZDB-GENE-030131-6401]
72. CU104697.1 CU104697.1 19 0.9 - 0.900 - - - - - - -
73. CABZ01073405.1 CABZ01073405.1 275 0.9 - - - - - 0.900 - - -
74. napg napg 645 0.897 - 0.897 - - - - - - -
75. pdk3a ENSDARG00000014527 15 0.896 - 0.896 - - - - - - - pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]
76. si:dkey-254e13.6 ENSDARG00000088301 191 0.895 - 0.895 - - - - - - - si:dkey-254e13.6 [Source:ZFIN;Acc:ZDB-GENE-070705-420]
77. cyb5r4 ENSDARG00000020898 119 0.894 - 0.894 - - - - - - - cytochrome b5 reductase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-225]
78. si:dkey-240h12.3 ENSDARG00000095458 7 0.894 - 0.894 - - - - - - - si:dkey-240h12.3 [Source:ZFIN;Acc:ZDB-GENE-070705-405]
79. adamtsl7 ENSDARG00000055439 575 0.894 - 0.894 - - - - - - - ADAMTS-like 7 [Source:ZFIN;Acc:ZDB-GENE-070816-2]
80. ntf7 ntf7 72 0.894 - 0.894 - - - - - - -
81. si:dkey-239i20.2 ENSDARG00000043518, ENSDARG00000111965 23 0.894 - 0.894 - - - - - - - si:dkey-239i20.2 [Source:ZFIN;Acc:ZDB-GENE-041001-98]
82. CABZ01039235.1 CABZ01039235.1 207 0.892 - 0.892 - - - - - - -
83. si:ch211-106h11.3 ENSDARG00000027360 154 0.892 - 0.892 - - - - - - - si:ch211-106h11.3 [Source:ZFIN;Acc:ZDB-GENE-050208-296]
84. si:dkeyp-80d11.4 ENSDARG00000103254 13 0.891 - 0.891 - - - - - - - si:dkeyp-80d11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-184]
85. STARD5 ENSDARG00000076117 251 0.891 - 0.891 - - - - - - - StAR-related lipid transfer (START) domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-130103-4]
86. slc2a12 ENSDARG00000036865, ENSDARG00000113590 148 0.891 - 0.891 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1513]
87. fbxl3b ENSDARG00000021882 58 0.89 - 0.890 - - - - - - - F-box and leucine-rich repeat protein 3b [Source:ZFIN;Acc:ZDB-GENE-041010-178]
88. pkib ENSDARG00000053110 527 0.89 - 0.890 - - - - - - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
89. arhgap19 ENSDARG00000083189 210 0.89 - 0.890 - - - - - - - Rho GTPase activating protein 19 [Source:ZFIN;Acc:ZDB-GENE-100922-157]
90. CT573468.1 CT573468.1 283 0.89 0.890 - - - - - - - -
91. snx30 ENSDARG00000069601 209 0.889 - 0.889 - - - - - - - sorting nexin family member 30 [Source:ZFIN;Acc:ZDB-GENE-050417-330]
92. tlx2 ENSDARG00000011273 870 0.888 - 0.888 - - - - - - - T cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020208-1]
93. dre-mir-429b ENSDARG00000082968 212 0.888 - 0.888 - - - - - - - dre-mir-429b [Source:miRBase;Acc:MI0010836]
94. si:rp71-7l19.6 si:rp71-7l19.6 12 0.888 - 0.888 - - - - - - -
95. CR352229.2 CR352229.2 784 0.887 - 0.887 - - - - - - -
96. si:dkey-161j23.5 ENSDARG00000094441 11 0.887 - 0.887 - - - - - - - si:dkey-161j23.5 [Source:ZFIN;Acc:ZDB-GENE-091204-373]
97. rnd1 rnd1 1086 0.887 - 0.887 - - - - - - -
98. map3k10 ENSDARG00000055672 284 0.885 - 0.885 - - - - - - - mitogen-activated protein kinase kinase kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050419-112]
99. pou5f3 ENSDARG00000044774 212 0.884 - 0.884 - - - - - - - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
100. usp37 ENSDARG00000040990 637 0.883 - 0.883 - - - - - - - ubiquitin specific peptidase 37 [Source:ZFIN;Acc:ZDB-GENE-061013-802]

There are 1162 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA