Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-208f21.4

Gene Name Gene ID Reads Annotation
si:ch211-208f21.4 si:ch211-208f21.4 4










Genes with expression patterns similar to si:ch211-208f21.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-208f21.4 si:ch211-208f21.4 4 4 1.000 - - - 1.000 1.000 - - 1.000
2. mir15a-1 36 2 1.000 - - - - 1.000 - - - microRNA 15a-1
3. wu:fe11b02_1 wu:fe11b02_1 7 2 - - - - - 1.000 - - 1.000
4. rhbdd3 ENSDARG00000079816 2 2 1.000 - - - - 1.000 - - - rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
5. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 2 1.000 - - - - 1.000 - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
6. CABZ01035647.1 CABZ01035647.1 5 1.99 - - - - 0.990 - - - 1.000
7. PLCB1 2 1.917 - - - - - 1.000 - - 0.917 phospholipase C beta 1
8. adra2c ENSDARG00000069669, ENSDARG00000109788, ENSDARG00000110072 61 1.905 - - - - 0.959 0.946 - - - adrenoceptor alpha 2C [Source:ZFIN;Acc:ZDB-GENE-021010-3]
9. wnt10b ENSDARG00000040925 162 1.895 0.895 - - - - 1.000 - - - wingless-type MMTV integration site family, member 10b [Source:ZFIN;Acc:ZDB-GENE-980526-524]
10. tbkbp1 ENSDARG00000061473 24 1.869 1.000 - - - - 0.869 - - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
11. NLRP1 NLRP1 54 1.828 1.000 - - - - 0.828 - - -
12. CR847990.1 CR847990.1 21 1.731 1.000 - - - - 0.731 - - -
13. adprhl1 ENSDARG00000041589 34 1.724 1.000 - - - - 0.724 - - - ADP-ribosylhydrolase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-126]
14. si:dkey-246e1.1 si:dkey-246e1.1 1 1.709 - - - - - 0.709 - - 1.000
15. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1.641 0.764 - - - - 0.877 - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
16. MAN1B1 MAN1B1 47 1.627 0.799 - - - - 0.828 - - -
17. nrxn3a ENSDARG00000043746 54 1.611 0.764 - - - - 0.847 - - - neurexin 3a [Source:ZFIN;Acc:ZDB-GENE-070206-9]
18. RAPGEF4 ENSDARG00000079872 82 1.552 0.777 - - - - 0.775 - - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
19. pou4f1 ENSDARG00000005559 821 1.538 - - - - - 0.817 - - 0.721 POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
20. stx12l ENSDARG00000044605 99 1.495 0.705 - - - - 0.790 - - - syntaxin 12, like [Source:ZFIN;Acc:ZDB-GENE-110715-1]
21. SLC4A5 9 1.439 0.715 - - - - 0.724 - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 5, transcript variant X7
22. si:dkey-233e3.6 si:dkey-233e3.6 1 1 1.000 - - - - - - - -
23. nr1d4a ENSDARG00000031161 24 1 - - - - - 1.000 - - - nuclear receptor subfamily 1, group D, member 4a [Source:ZFIN;Acc:ZDB-GENE-080403-5]
24. xkr6 xkr6 286 1 1.000 - - - - - - - -
25. RNF207 RNF207 9 1 - - - - - - - - 1.000
26. rassf4 ENSDARG00000012460 43 1 1.000 - - - - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
27. CR382372.2 CR382372.2 136 1 1.000 - - - - - - - -
28. VOPP1_1 VOPP1_1 73 1 1.000 - - - - - - - -
29. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 1 1.000 - - - - - - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
30. si:ch211-207c7.6 si:ch211-207c7.6 23 1 - - - - - 1.000 - - -
31. cox5aa_1 ENSDARG00000088383 3 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
32. CR450711.2 CR450711.2 0 1 - - - - - - - - 1.000
33. si:dkey-264b2.3 19 1 1.000 - - - - - - - - si:dkey-264b2.3, transcript variant X2
34. lrp2b ENSDARG00000007906 23 1 1.000 - - - - - - - - low density lipoprotein receptor-related protein 2b [Source:ZFIN;Acc:ZDB-GENE-111115-1]
35. si:dkey-233h12.2 si:dkey-233h12.2 1 1 - - - - - - - - 1.000
36. si:ch1073-418f12.2 si:ch1073-418f12.2 15 1 1.000 - - - - - - - -
37. ccbl2 4 1 - - - - - - - - 1.000 cysteine conjugate-beta lyase 2, transcript variant X4
38. si:ch73-115f13.1 si:ch73-115f13.1 15 1 1.000 - - - - - - - -
39. helq ENSDARG00000079818 133 1 1.000 - - - - - - - - helicase, POLQ like [Source:ZFIN;Acc:ZDB-GENE-060503-421]
40. ARHGEF10L ARHGEF10L 18 1 - - - - - 1.000 - - -
41. wdr27_1 ENSDARG00000053386 1 1 1.000 - - - - - - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
42. kiss2 ENSDARG00000077985 2 1 1.000 - - - - - - - - kisspeptin 2 [Source:ZFIN;Acc:ZDB-GENE-090526-1]
43. nfixb ENSDARG00000061836 7 1 1.000 - - - - - - - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
44. U5_4 U5_4 1 1 - - - - - - - - 1.000
45. aldh2.2_1 ENSDARG00000028087 279 1 1.000 - - - - - - - - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
46. si:ch211-195i24.1 si:ch211-195i24.1 10 1 - - - - - 1.000 - - -
47. si:ch73-280o22.2 ENSDARG00000077072 67 1 1.000 - - - - - - - - si:ch73-280o22.2 [Source:ZFIN;Acc:ZDB-GENE-141216-272]
48. sobpb ENSDARG00000017386 0 1 - - - - - - - - 1.000 sine oculis binding protein homolog (Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-041210-8]
49. si:ch211-274p24.3 si:ch211-274p24.3 72 1 - - - - - 1.000 - - -
50. C25H11orf74 C25H11orf74 161 1 1.000 - - - - - - - -
51. noxo1b ENSDARG00000056374 78 1 1.000 - - - - - - - - NADPH oxidase organizer 1b [Source:ZFIN;Acc:ZDB-GENE-101203-1]
52. CR318629.1 CR318629.1 7 1 - - - - - 1.000 - - -
53. CABZ01073654.1 CABZ01073654.1 16 1 - - - - - 1.000 - - -
54. CABZ01117474.1 CABZ01117474.1 2 1 1.000 - - - - - - - -
55. lsm10 5 1 - - - - - - - - 1.000 LSM10, U7 small nuclear RNA associated
56. gpr19 ENSDARG00000102226 17 1 1.000 - - - - - - - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
57. IKZF4 ENSDARG00000037068 36 1 - - - - - 1.000 - - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
58. spata2l ENSDARG00000068814 152 1 1.000 - - - - - - - - spermatogenesis associated 2-like [Source:ZFIN;Acc:ZDB-GENE-070705-402]
59. si:dkey-9p20.24 si:dkey-9p20.24 4 1 - - - - - - - - 1.000
60. got1 ENSDARG00000039093 1 1 1.000 - - - - - - - - glutamic-oxaloacetic transaminase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-2003]
61. DUSP19 DUSP19 10 1 1.000 - - - - - - - -
62. si:dkeyp-82a1.2 ENSDARG00000094192 2 1 - - - - - 1.000 - - - si:dkeyp-82a1.2 [Source:ZFIN;Acc:ZDB-GENE-081104-475]
63. CCSAP CCSAP 147 1 1.000 - - - - - - - -
64. si:dkey-21o19.6 si:dkey-21o19.6 18 1 1.000 - - - - - - - -
65. ARHGAP6 33 1 1.000 - - - - - - - - Rho GTPase activating protein 6
66. BX000430.1 ENSDARG00000112057 135 1 1.000 - - - - - - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
67. CACNA2D1_1 ENSDARG00000073752 2 1 1.000 - - - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
68. GAS2 18 1 - - - - - 1.000 - - - growth arrest specific 2, transcript variant X1
69. CABZ01009626.1 CABZ01009626.1 2 1 - - - - - 1.000 - - -
70. tyro3 ENSDARG00000005356 4 1 - - - - - - - - 1.000 TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
71. zgc:114037_2 11 1 1.000 - - - - - - - - zgc:114037
72. NPDC1 NPDC1 126 1 1.000 - - - - - - - -
73. CT573264.3 CT573264.3 0 1 - - - - - - - - 1.000
74. SYT17 ENSDARG00000060741 1 1 - - - - - 1.000 - - - synaptotagmin XVII [Source:ZFIN;Acc:ZDB-GENE-090527-1]
75. EMB ENSDARG00000059485 35 1 1.000 - - - - - - - - embigin [Source:ZFIN;Acc:ZDB-GENE-070705-158]
76. CABZ01072338.1 CABZ01072338.1 0 1 - - - - - - - - 1.000
77. si:ch211-245l1.1 si:ch211-245l1.1 1 1 - - - - - 1.000 - - -
78. tbc1d9 ENSDARG00000043627, ENSDARG00000059900 3 1 1.000 - - - - - - - - TBC1 domain family, member 9 (with GRAM domain) [Source:ZFIN;Acc:ZDB-GENE-060810-33]
79. CR847844.3 CR847844.3 1 1 1.000 - - - - - - - -
80. si:dkey-65b12.12 ENSDARG00000094458 26 1 - - - - - - - - 1.000 si:dkey-65b12.12 [Source:ZFIN;Acc:ZDB-GENE-060526-325]
81. BX530409.1 BX530409.1 65 1 1.000 - - - - - - - -
82. CABZ01074946.1 CABZ01074946.1 119 1 1.000 - - - - - - - -
83. KHNYN ENSDARG00000092488 10 1 1.000 - - - - - - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
84. si:ch211-168h21.3 10 1 - - - - - 1.000 - - - si:ch211-168h21.3
85. UNC13A UNC13A 36 1 1.000 - - - - - - - -
86. EXT1_1 EXT1_1 3 1 - - - - - - - - 1.000
87. mapk9 ENSDARG00000077364 38 1 - - - - - 1.000 - - - mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]
88. cyp2n13 ENSDARG00000042953 10 1 - - - - - 1.000 - - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
89. mmrn2a ENSDARG00000076135 37 1 1.000 - - - - - - - - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
90. si:dkey-192k22.2 ENSDARG00000095111 4 1 - - - - - - - - 1.000 si:dkey-192k22.2 [Source:ZFIN;Acc:ZDB-GENE-090313-219]
91. RP1 ENSDARG00000077687 6 1 1.000 - - - - - - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
92. wfs1b ENSDARG00000074617 69 1 - - - - - 1.000 - - - Wolfram syndrome 1b (wolframin) [Source:ZFIN;Acc:ZDB-GENE-050809-19]
93. Telomerase-vert Telomerase-vert 8 1 1.000 - - - - - - - -
94. IMPG2 IMPG2 1 1 1.000 - - - - - - - -
95. zgc:77938 ENSDARG00000088366 74 1 1.000 - - - - - - - - zgc:77938 [Source:ZFIN;Acc:ZDB-GENE-040426-1910]
96. si:dkey-272j9.2 si:dkey-272j9.2 91 1 - - - - - 1.000 - - -
97. 5S_rRNA_15 5S_rRNA_15 9 1 - - - - - 1.000 - - -
98. AL929453.1 ENSDARG00000115950 31 1 1.000 - - - - - - - -
99. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 1 1.000 - - - - - - - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
100. FAM163A_1 ENSDARG00000093021 6 1 - - - - - - - - 1.000 family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]

There are 728 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA