Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-207l22.2

Gene Name Gene ID Reads Annotation
si:ch211-207l22.2 si:ch211-207l22.2 1










Genes with expression patterns similar to si:ch211-207l22.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-207l22.2 si:ch211-207l22.2 1 2 - - - - 1.000 1.000 - - -
2. si:ch211-93g21.1 ENSDARG00000093602 5 2 - - - - 1.000 1.000 - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
3. scg5_1 ENSDARG00000032126, ENSDARG00000077045 6 2 - - - - 1.000 1.000 - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
4. rpz3 ENSDARG00000069728 11 2 - - - - 1.000 1.000 - - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
5. CABZ01031627.2 CABZ01031627.2 1 2 - - - - 1.000 1.000 - - -
6. pcdh15b ENSDARG00000008127 2 2 - - - - 1.000 1.000 - - - protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
7. polg ENSDARG00000060951 33 1.811 - - - - 0.811 1.000 - - - polymerase (DNA directed), gamma [Source:ZFIN;Acc:ZDB-GENE-060303-1]
8. GABRA3 ENSDARG00000090883 5 1.806 - - - - 0.806 1.000 - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
9. si:ch211-76l23.5 si:ch211-76l23.5 26 1.768 - - - - 0.768 1.000 - - -
10. Mar-04 Mar-04 21 1.524 - - - - 0.753 0.771 - - -
11. ADAD1 ENSDARG00000089181 9 1 - - - - 1.000 - - - - adenosine deaminase domain containing 1 (testis-specific) [Source:ZFIN;Acc:ZDB-GENE-030131-6285]
12. pnocb ENSDARG00000024189 18 1 - - - - 1.000 - - - - prepronociceptin b [Source:ZFIN;Acc:ZDB-GENE-040114-1]
13. st8sia1 ENSDARG00000098221 34 1 - - - - - 1.000 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
14. gatsl3 7 1 - - - - 1.000 - - - - GATS protein-like 3
15. BX000981.1 ENSDARG00000092940 1 1 - - - - - 1.000 - - -
16. ela2l ENSDARG00000056765, ENSDARG00000114256 31 1 - - - - - 1.000 - - - elastase 2 like [Source:ZFIN;Acc:ZDB-GENE-040511-1]
17. CU468142.1 CU468142.1 6 1 - - - - - 1.000 - - -
18. agbl5 ENSDARG00000045900 2 1 - - - - 1.000 - - - - ATP/GTP binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-040822-29]
19. CABZ01071407.1 CABZ01071407.1 6 1 - - - - 1.000 - - - -
20. si:dkey-109j17.5 ENSDARG00000104891 2 1 - - - - - 1.000 - - - si:dkey-109j17.5 [Source:ZFIN;Acc:ZDB-GENE-090313-173]
21. bmpr1ab ENSDARG00000105045 2 1 - - - - 1.000 - - - - bone morphogenetic protein receptor, type IAb [Source:ZFIN;Acc:ZDB-GENE-040912-150]
22. BX322608.1 ENSDARG00000111690 326 1 - - - - - 1.000 - - -
23. si:ch211-59m15.2 si:ch211-59m15.2 3 1 - - - - - 1.000 - - -
24. FDFT1 ENSDARG00000101062 6 1 - - - - - 1.000 - - - farnesyl-diphosphate farnesyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-081104-242]
25. mdm1 ENSDARG00000045675 64 1 - - - - - 1.000 - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
26. si:dkey-34e4.1 ENSDARG00000022085 5 1 - - - - 1.000 - - - - si:dkey-34e4.1 [Source:ZFIN;Acc:ZDB-GENE-070705-456]
27. si:ch211-272h9.5 ENSDARG00000092167 8 1 - - - - 1.000 - - - - si:ch211-272h9.5 [Source:ZFIN;Acc:ZDB-GENE-070705-167]
28. PEG3_8 PEG3_8 1 1 - - - - 1.000 - - - -
29. il21r il21r 74 1 - - - - - 1.000 - - -
30. dgcr8 ENSDARG00000035564, ENSDARG00000113898 39 1 - - - - 1.000 - - - - DGCR8 microprocessor complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-3421]
31. zgc:113343 ENSDARG00000103196 2 1 - - - - 1.000 - - - - zgc:113343 [Source:ZFIN;Acc:ZDB-GENE-050327-90]
32. espnla ENSDARG00000078211 8 1 - - - - 1.000 - - - - espin like a [Source:ZFIN;Acc:ZDB-GENE-131121-3]
33. hs6st3b ENSDARG00000069500 5 1 - - - - - 1.000 - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
34. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1 - - - - - 1.000 - - - chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
35. CABZ01076758.1 ENSDARG00000100810 3 1 - - - - 1.000 - - - -
36. si:ch211-3o3.8 si:ch211-3o3.8 2 1 - - - - - 1.000 - - -
37. si:dkey-222f2.7 ENSDARG00000071667 1 1 - - - - - 1.000 - - - si:dkey-222f2.7 [Source:ZFIN;Acc:ZDB-GENE-050208-727]
38. si:ch211-10j20.4 si:ch211-10j20.4 0 1 - - - - - 1.000 - - -
39. emc4 ENSDARG00000039268 553 1 - - - - - 1.000 - - - ER membrane protein complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1891]
40. si:dkey-45e15.9 si:dkey-45e15.9 0 1 - - - - - 1.000 - - -
41. SNORA23 SNORA23 1 1 - - - - - 1.000 - - -
42. cul4a ENSDARG00000096578 14 1 - - - - - 1.000 - - - cullin 4A [Source:ZFIN;Acc:ZDB-GENE-040426-1357]
43. si:ch211-105d18.7 si:ch211-105d18.7 6 1 - - - - - 1.000 - - -
44. C3H19orf66 C3H19orf66 20 1 - - - - - 1.000 - - -
45. zgc:153704 ENSDARG00000045979 11 1 - - - - 1.000 - - - - zgc:153704 [Source:ZFIN;Acc:ZDB-GENE-060929-1114]
46. si:dkey-28d5.7 si:dkey-28d5.7 2 1 - - - - - 1.000 - - -
47. antxr1d ENSDARG00000060845 10 1 - - - - - 1.000 - - - ANTXR cell adhesion molecule 1d [Source:ZFIN;Acc:ZDB-GENE-090313-28]
48. BX000477.1 BX000477.1 1 1 - - - - 1.000 - - - -
49. nab2 ENSDARG00000078076 108 1 - - - - - 1.000 - - - NGFI-A binding protein 2 (EGR1 binding protein 2) [Source:ZFIN;Acc:ZDB-GENE-080204-105]
50. asic4a ENSDARG00000025162 25 1 - - - - - 1.000 - - - acid-sensing (proton-gated) ion channel family member 4a [Source:ZFIN;Acc:ZDB-GENE-040513-5]
51. phlpp2 ENSDARG00000090255 1 1 - - - - - 1.000 - - - PH domain and leucine rich repeat protein phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-070719-3]
52. CU896645.1 CU896645.1 10 1 - - - - - 1.000 - - -
53. FP236810.3 FP236810.3 1 1 - - - - - 1.000 - - -
54. si:dkey-47k20.7 ENSDARG00000056014 1 1 - - - - - 1.000 - - - si:dkey-47k20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-264]
55. caspbl ENSDARG00000094433 1 1 - - - - - 1.000 - - - caspase b, like [Source:ZFIN;Acc:ZDB-GENE-090311-53]
56. CABZ01051641.1 CABZ01051641.1 0 1 - - - - - 1.000 - - -
57. si:ch73-346o4.3 si:ch73-346o4.3 29 1 - - - - - 1.000 - - -
58. MUC5B MUC5B 1 1 - - - - 1.000 - - - -
59. rx3 ENSDARG00000052893 43 1 - - - - - 1.000 - - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
60. MFAP4_5 MFAP4_5 4 1 - - - - - 1.000 - - -
61. mucms1 ENSDARG00000069566 0 1 - - - - - 1.000 - - - mucin, multiple PTS and SEA group, member 1 [Source:ZFIN;Acc:ZDB-GENE-061009-17]
62. HEPACAM ENSDARG00000112032 1 1 - - - - - 1.000 - - - hepatic and glial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:26361]
63. uts2a ENSDARG00000053854, ENSDARG00000116102 16 1 - - - - - 1.000 - - - urotensin 2, alpha [Source:ZFIN;Acc:ZDB-GENE-040630-11]
64. CABZ01083834.1 CABZ01083834.1 38 1 - - - - - 1.000 - - -
65. fgf22 ENSDARG00000076510, ENSDARG00000114053, ENSDARG00000115407 3 1 - - - - 1.000 - - - - fibroblast growth factor 22 [Source:ZFIN;Acc:ZDB-GENE-050208-380]
66. tmprss3a ENSDARG00000053315 5 1 - - - - 1.000 - - - - transmembrane serine protease 3a [Source:ZFIN;Acc:ZDB-GENE-070912-70]
67. MEIS2 MEIS2 3 1 - - - - 1.000 - - - -
68. ZP2_2 ZP2_2 28 1 - - - - - 1.000 - - -
69. ush2a ENSDARG00000029482 10 1 - - - - - 1.000 - - - Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
70. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1 - - - - - 1.000 - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
71. CU633848.1 CU633848.1 4 1 - - - - - 1.000 - - -
72. CABZ01076817.1 CABZ01076817.1 4 1 - - - - 1.000 - - - -
73. CR792453.3 ENSDARG00000110328 5 1 - - - - - 1.000 - - - uncharacterized LOC110438862 [Source:NCBI gene;Acc:110438862]
74. C14orf80 C14orf80 20 1 - - - - - 1.000 - - -
75. htr1aa ENSDARG00000093745 0 1 - - - - - 1.000 - - - 5-hydroxytryptamine (serotonin) receptor 1A a [Source:ZFIN;Acc:ZDB-GENE-071203-1]
76. gzmk ENSDARG00000028780 1 1 - - - - - 1.000 - - - granzyme K [Source:ZFIN;Acc:ZDB-GENE-091204-352]
77. CABZ01074298.1 ENSDARG00000087767 6 1 - - - - 1.000 - - - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
78. pole2 ENSDARG00000100028 42 1 - - - - - 1.000 - - - polymerase (DNA directed), epsilon 2 [Source:ZFIN;Acc:ZDB-GENE-020419-16]
79. desi1b ENSDARG00000089529, ENSDARG00000109374, ENSDARG00000111355 3 1 - - - - 1.000 - - - - desumoylating isopeptidase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-936]
80. grin2cb ENSDARG00000077560 9 1 - - - - - 1.000 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
81. RNF14_3 RNF14_3 15 1 - - - - - 1.000 - - -
82. ddx46 ENSDARG00000099458 24 1 - - - - 1.000 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]
83. TMEM136 TMEM136 13 1 - - - - - 1.000 - - -
84. foxb1a ENSDARG00000089042 101 1 - - - - - 1.000 - - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
85. efr3a ENSDARG00000005163, ENSDARG00000115083 7 1 - - - - - 1.000 - - - EFR3 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1681]
86. si:ch211-202m22.1 ENSDARG00000094491 24 1 - - - - - 1.000 - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
87. glsa ENSDARG00000062812 1 1 - - - - 1.000 - - - - glutaminase a [Source:ZFIN;Acc:ZDB-GENE-050204-3]
88. KBTBD11 ENSDARG00000104958 8 1 - - - - 1.000 - - - - kelch repeat and BTB (POZ) domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-130530-678]
89. ZNF70_13 ZNF70_13 1 1 - - - - 1.000 - - - -
90. BX088525.2 ENSDARG00000117222 11 1 - - - - 1.000 - - - -
91. si:ch211-89f22.1 si:ch211-89f22.1 11 1 - - - - - 1.000 - - -
92. si:ch211-113a14.10_1 si:ch211-113a14.10_1 59 1 - - - - 1.000 - - - -
93. PHKA1 PHKA1 10 1 - - - - - 1.000 - - -
94. r3hdm4 ENSDARG00000063254 201 1 - - - - - 1.000 - - - R3H domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1352]
95. si:ch211-229o8.4 si:ch211-229o8.4 1 1 - - - - - 1.000 - - -
96. si:dkey-63d15.12 ENSDARG00000075480 9 1 - - - - - 1.000 - - - si:dkey-63d15.12 [Source:ZFIN;Acc:ZDB-GENE-080303-18]
97. rrh ENSDARG00000039534 4 1 - - - - - 1.000 - - - retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]
98. zp2.5 ENSDARG00000086522 15 1 - - - - - 1.000 - - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
99. si:dkey-220o5.5 ENSDARG00000099211 0 1 - - - - 1.000 - - - - si:dkey-220o5.5 [Source:ZFIN;Acc:ZDB-GENE-081104-376]
100. CABZ01069081.1 CABZ01069081.1 16 1 - - - - - 1.000 - - -

There are 438 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA