Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-207c7.6

Gene Name Gene ID Reads Annotation
si:ch211-207c7.6 si:ch211-207c7.6 23










Genes with expression patterns similar to si:ch211-207c7.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-207c7.6 si:ch211-207c7.6 23 8 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000
2. trpc5b ENSDARG00000060837, ENSDARG00000114021 15 2.61 - 0.903 0.902 - - - - - 0.805 transient receptor potential cation channel, subfamily C, member 5b [Source:ZFIN;Acc:ZDB-GENE-091112-24]
3. RGS14 RGS14 15 2.581 - 0.919 - - - - 0.874 0.788 -
4. IKZF4 ENSDARG00000037068 36 1.919 - 0.919 - - - 1.000 - - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
5. zgc:113295_1 ENSDARG00000074768, ENSDARG00000103947 21 1.901 - 0.986 - - - - 0.915 - - zgc:113295 [Source:ZFIN;Acc:ZDB-GENE-050320-122]
6. LAMA3 ENSDARG00000071462 5 1.874 - - - - - 1.000 0.874 - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
7. wu:fe11b02_1 wu:fe11b02_1 7 1.874 - - - - - 1.000 0.874 - -
8. mapk9 ENSDARG00000077364 38 1.813 - - 0.813 - - 1.000 - - - mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]
9. sh2d3cb ENSDARG00000104555, ENSDARG00000116530 21 1.807 - - 0.902 - - - - - 0.905 SH2 domain containing 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1052]
10. psmb11 psmb11 5 1.792 - - - - 0.792 1.000 - - -
11. dyx1c1 dyx1c1 36 1.785 - 0.986 - - - - 0.799 - -
12. slc25a29 ENSDARG00000057352 9 1.776 - - 0.902 - - - 0.874 - - solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:ZFIN;Acc:ZDB-GENE-050913-70]
13. gpr98 gpr98 717 1.764 0.868 0.896 - - - - - - -
14. ADAM12 ENSDARG00000116062 35 1.753 - 0.906 - - - 0.847 - - - ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]
15. ube2l3b ENSDARG00000027141 26 1.753 - 0.903 0.850 - - - - - - ubiquitin-conjugating enzyme E2L 3b [Source:ZFIN;Acc:ZDB-GENE-030131-662]
16. C5H9orf117 C5H9orf117 88 1.748 - 0.845 - - - - 0.903 - -
17. sema3e ENSDARG00000036571, ENSDARG00000116446 115 1.746 - 0.987 0.759 - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E [Source:ZFIN;Acc:ZDB-GENE-030131-7864]
18. FAM177A1 ENSDARG00000079636 19 1.731 0.731 - - - - 1.000 - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
19. si:dkeyp-82a1.5 si:dkeyp-82a1.5 6 1.728 - - - - 0.728 1.000 - - -
20. si:ch211-212k5.2 si:ch211-212k5.2 152 1.72 - 0.876 - - - - 0.844 - -
21. sumo2a ENSDARG00000104390 4 1.696 - - 0.822 - - - 0.874 - - small ubiquitin-like modifier 2a [Source:ZFIN;Acc:ZDB-GENE-120215-155]
22. NFAT5 NFAT5 62 1.677 - 0.891 0.786 - - - - - -
23. bivm ENSDARG00000061409, ENSDARG00000111376 25 1.673 - 0.914 - - - 0.759 - - - basic, immunoglobulin-like variable motif containing [Source:ZFIN;Acc:ZDB-GENE-010822-3]
24. BX323854.3 BX323854.3 62 1.656 0.731 0.925 - - - - - - -
25. tph1b ENSDARG00000036082, ENSDARG00000112888 79 1.649 - 0.903 - - - 0.746 - - - tryptophan hydroxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030805-6]
26. C24H3orf58 C24H3orf58 99 1.644 - 0.859 - - - 0.785 - - -
27. cadm1b ENSDARG00000042677 277 1.641 - 0.919 - - - 0.722 - - - cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-080327-34]
28. si:dkey-121j17.5 ENSDARG00000014232 18 1.637 - 0.763 - - - - 0.874 - - si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]
29. klf6b ENSDARG00000038561 27 1.635 0.731 0.904 - - - - - - - Kruppel-like factor 6b [Source:ZFIN;Acc:ZDB-GENE-070912-633]
30. dync1i2a ENSDARG00000078386 53 1.632 - 0.869 - - 0.763 - - - - dynein, cytoplasmic 1, intermediate chain 2a [Source:ZFIN;Acc:ZDB-GENE-060929-1086]
31. CABZ01070852.2 ENSDARG00000114999 16 1.622 0.731 0.891 - - - - - - -
32. wdr65 wdr65 251 1.617 - 0.825 - - - - 0.792 - -
33. PHYH ENSDARG00000086740 15 1.61 - - - - - 0.762 - - 0.848 phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
34. si:ch211-160d14.9 8 1.605 0.731 - - - - - 0.874 - - si:ch211-160d14.9, transcript variant X1
35. SOX8 SOX8 22 1.605 0.731 - - - - - 0.874 - -
36. 5S_rRNA_10 5S_rRNA_10 2 1.605 0.731 - - - - - 0.874 - -
37. F2RL3 ENSDARG00000079399 29 1.605 0.731 - - - - - 0.874 - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
38. AL954372.1_1 ENSDARG00000112499 57 1.604 - 0.865 - - - 0.739 - - -
39. dnali1 ENSDARG00000069815 10 1.602 - - - - - 0.847 - - 0.755 dynein, axonemal, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-080204-7]
40. zgc:92658 8 1.598 0.731 0.867 - - - - - - - zgc:92658
41. tbx16 ENSDARG00000007329 255 1.578 - - - - - 0.819 0.759 - - T-box 16 [Source:ZFIN;Acc:ZDB-GENE-990615-5]
42. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1.57 0.731 - - - - - 0.839 - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
43. slco5a1 slco5a1 383 1.566 0.845 - - - - - 0.721 - -
44. csrnp1b ENSDARG00000038429 10 1.557 0.731 0.826 - - - - - - - cysteine-serine-rich nuclear protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1515]
45. BICD1 BICD1 9 1.554 - - 0.777 - - - - - 0.777
46. ttc12 ENSDARG00000056896 97 1.538 - 0.814 - - - - 0.724 - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
47. CU683898.1 CU683898.1 203 1.524 - 0.771 - - - 0.753 - - -
48. CABZ01069081.1 CABZ01069081.1 16 1.514 0.731 - - - - - 0.783 - -
49. si:dkey-105h11.2 13 1.508 - - - - - - 0.731 - 0.777 si:dkey-105h11.2
50. SLC4A5 9 1.506 - - - - 0.782 0.724 - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 5, transcript variant X7
51. dock9b ENSDARG00000016311 122 1.501 - 0.741 - - - 0.760 - - - dedicator of cytokinesis 9b [Source:ZFIN;Acc:ZDB-GENE-090916-2]
52. MYO5C ENSDARG00000104235 1285 1.501 - 0.710 - - - 0.791 - - - myosin VC [Source:ZFIN;Acc:ZDB-GENE-131127-196]
53. esr2b ENSDARG00000034181 20 1.498 - - - - 0.767 - 0.731 - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]
54. cacnb2a ENSDARG00000099045 374 1.49 0.731 - - - - - 0.759 - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
55. erc1a ENSDARG00000009941, ENSDARG00000110965 7 1.486 0.731 - - - - - - - 0.755 ELKS/RAB6-interacting/CAST family member 1a [Source:ZFIN;Acc:ZDB-GENE-091214-5]
56. CU695076.1 CU695076.1 7 1.477 0.731 - - - - 0.746 - - -
57. ypel2a ENSDARG00000077224 242 1.446 - 0.721 - - - - 0.725 - - yippee-like 2a [Source:ZFIN;Acc:ZDB-GENE-091118-98]
58. hnf4g ENSDARG00000071565 117 1.445 - 0.741 - - - - 0.704 - - hepatocyte nuclear factor 4, gamma [Source:ZFIN;Acc:ZDB-GENE-060929-100]
59. cldn10l2 ENSDARG00000105042 11 1.441 - - - - 0.710 - 0.731 - - claudin 10-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9598]
60. dph2 ENSDARG00000078077 36 1.441 - - - - - 0.724 0.717 - - DPH2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030219-100]
61. trpm2_1 ENSDARG00000095696, ENSDARG00000101641 1 1 - - - - - 1.000 - - - transient receptor potential cation channel, subfamily M, member 2 [Source:ZFIN;Acc:ZDB-GENE-061214-4]
62. CYP27A1 CYP27A1 4 1 - - - - - 1.000 - - -
63. BX511266.1 BX511266.1 21 1 - - - - - 1.000 - - -
64. mir15a-1 36 1 - - - - - 1.000 - - - microRNA 15a-1
65. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 - - - - - 1.000 - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
66. hsd17b7_1 ENSDARG00000088140 36 1 - - - - - 1.000 - - - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
67. CR381630.1 CR381630.1 23 1 - - - - - 1.000 - - -
68. hivep3a ENSDARG00000075928 17 1 - - - - - 1.000 - - - human immunodeficiency virus type I enhancer binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-081029-2]
69. porcnl ENSDARG00000052455 29 1 - - - - - 1.000 - - - porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]
70. BRINP3 BRINP3 11 1 - - - - - 1.000 - - -
71. BX005052.1 BX005052.1 16 1 - - - - - 1.000 - - -
72. CABZ01073654.1 CABZ01073654.1 16 1 - - - - - 1.000 - - -
73. CR388129.1 ENSDARG00000097173 89 1 - - - - - 1.000 - - -
74. gabbr1a ENSDARG00000018967 2 1 - - - - - 1.000 - - - gamma-aminobutyric acid (GABA) B receptor, 1a [Source:ZFIN;Acc:ZDB-GENE-030904-5]
75. rbp1b rbp1b 36 1 - - - - - 1.000 - - -
76. ppp4r4 ENSDARG00000010407 1 1 - - - - - 1.000 - - - protein phosphatase 4, regulatory subunit 4 [Source:ZFIN;Acc:ZDB-GENE-041001-164]
77. si:dkey-234k7.2 si:dkey-234k7.2 4 1 - - - - - 1.000 - - -
78. NPY2R ENSDARG00000094763, ENSDARG00000112792 1 1 - - - - - 1.000 - - - neuropeptide Y receptor Y2 [Source:ZFIN;Acc:ZDB-GENE-040924-8]
79. si:ch73-94f11.5 si:ch73-94f11.5 6 1 - - - - - 1.000 - - -
80. KCNA2_1 KCNA2_1 15 1 - - - - - 1.000 - - -
81. BX927362.1 ENSDARG00000097469 13 1 - - - - - 1.000 - - -
82. xcr1a xcr1a 3 1 - - - - - 1.000 - - -
83. cyp2n13 ENSDARG00000042953 10 1 - - - - - 1.000 - - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
84. cecr1b 2 1 - - - - - 1.000 - - - cat eye syndrome chromosome region, candidate 1b
85. si:dkey-122c11.4 si:dkey-122c11.4 13 1 - - - - - 1.000 - - -
86. ARHGEF10L ARHGEF10L 18 1 - - - - - 1.000 - - -
87. CABZ01009626.1 CABZ01009626.1 2 1 - - - - - 1.000 - - -
88. bokb ENSDARG00000008807 29 1 - - - - - - - - 1.000 BOK, BCL2 family apoptosis regulator b [Source:ZFIN;Acc:ZDB-GENE-040426-1346]
89. ccr7 ENSDARG00000044561 2 1 - - - - - 1.000 - - - chemokine (C-C motif) receptor 7 [Source:ZFIN;Acc:ZDB-GENE-060522-2]
90. scn1ba ENSDARG00000060222, ENSDARG00000115181 76 1 - - - - - 1.000 - - - sodium channel, voltage-gated, type I, beta a [Source:ZFIN;Acc:ZDB-GENE-060503-604]
91. 5S_rRNA_15 5S_rRNA_15 9 1 - - - - - 1.000 - - -
92. si:dkey-272j9.2 si:dkey-272j9.2 91 1 - - - - - 1.000 - - -
93. si:ch211-168h21.3 10 1 - - - - - 1.000 - - - si:ch211-168h21.3
94. scai ENSDARG00000060865 6 1 - - - - - - - - 1.000 suppressor of cancer cell invasion [Source:ZFIN;Acc:ZDB-GENE-060526-57]
95. wnt10b ENSDARG00000040925 162 1 - - - - - 1.000 - - - wingless-type MMTV integration site family, member 10b [Source:ZFIN;Acc:ZDB-GENE-980526-524]
96. nsfa ENSDARG00000007654 16 1 - - - - - 1.000 - - - N-ethylmaleimide-sensitive factor a [Source:ZFIN;Acc:ZDB-GENE-030616-37]
97. wfs1b ENSDARG00000074617 69 1 - - - - - 1.000 - - - Wolfram syndrome 1b (wolframin) [Source:ZFIN;Acc:ZDB-GENE-050809-19]
98. shank3a ENSDARG00000063332 5 1 - - - - - 1.000 - - - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
99. si:ch211-214c7.4 ENSDARG00000069595 56 1 - - - - - 1.000 - - - si:ch211-214c7.4 [Source:ZFIN;Acc:ZDB-GENE-030131-6275]
100. PRKCA_1 ENSDARG00000099841 12 1 - - - - - 1.000 - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]

There are 1450 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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