Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-202n12.5

Gene Name Gene ID Reads Annotation
si:ch211-202n12.5 si:ch211-202n12.5 19










Genes with expression patterns similar to si:ch211-202n12.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-202n12.5 si:ch211-202n12.5 19 7 1.000 - 1.000 1.000 1.000 - 1.000 1.000 1.000
2. C1S_1 C1S_1 11 2 1.000 - - - - - 1.000 - -
3. cep68 ENSDARG00000039411 30 2 1.000 - - - - - 1.000 - - centrosomal protein 68 [Source:ZFIN;Acc:ZDB-GENE-030616-565]
4. MSH4 ENSDARG00000075826 37 2 1.000 - - - - - 1.000 - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
5. RNF122 RNF122 29 2 1.000 - - - - - 1.000 - -
6. CU633479.6 ENSDARG00000116146 4 2 1.000 - - - - - 1.000 - -
7. CDHR5 CDHR5 2 2 1.000 - - - - - 1.000 - -
8. si:dkey-167k11.3 si:dkey-167k11.3 3 2 1.000 - - - - - 1.000 - -
9. fabp10a ENSDARG00000038439 4 2 1.000 - - - - - 1.000 - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
10. rictora ENSDARG00000100867 20 2 1.000 - - - - - 1.000 - - RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
11. col17a1a ENSDARG00000069415 52 1.992 - - - 0.992 - - 1.000 - - collagen, type XVII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090313-107]
12. si:ch211-264f5.5 si:ch211-264f5.5 2 1.992 - - - - - - - 1.000 0.992
13. stpg1 ENSDARG00000103765 19 1.991 - - 0.999 0.992 - - - - - sperm-tail PG-rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-373]
14. tph2 ENSDARG00000057239, ENSDARG00000109777 55 1.941 - - - - - - 1.000 0.941 - tryptophan hydroxylase 2 (tryptophan 5-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-040624-4]
15. SLC7A8 SLC7A8 25 1.934 - - - 0.934 - - 1.000 - -
16. ptger4a ENSDARG00000059236 13 1.896 - - - - 0.896 - 1.000 - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
17. ubtd1b ENSDARG00000079623 26 1.847 0.847 - - - - - 1.000 - - ubiquitin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050913-62]
18. CU633991.1 CU633991.1 16 1.796 0.796 - - - - - 1.000 - -
19. arl13a ENSDARG00000052575 25 1.776 - - - - 0.864 - 0.912 - - ADP-ribosylation factor-like 13A [Source:ZFIN;Acc:ZDB-GENE-040426-1790]
20. si:dkey-78i1.2 si:dkey-78i1.2 15 1.774 1.000 - - 0.774 - - - - -
21. si:dkey-1h24.6 ENSDARG00000092653 13 1.76 - - - 0.760 - - 1.000 - - si:dkey-1h24.6 [Source:ZFIN;Acc:ZDB-GENE-100922-103]
22. si:dkey-225h23.4 si:dkey-225h23.4 7 1.759 - - - - - - 0.759 1.000 -
23. e2f5 ENSDARG00000038812 388 1.753 - - - - - - 0.911 - 0.842 E2F transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-030828-3]
24. SIRT4 ENSDARG00000010415 118 1.75 0.750 - - - - - 1.000 - - sirtuin 4 [Source:ZFIN;Acc:ZDB-GENE-041010-65]
25. si:ch211-150j10.4 ENSDARG00000079336 23 1.745 1.000 - - - - - 0.745 - - si:ch211-150j10.4 [Source:ZFIN;Acc:ZDB-GENE-110411-215]
26. epha8 22 1.743 - - - - 0.743 - 1.000 - - eph receptor A8
27. si:dkey-22i16.9 ENSDARG00000095949 16 1.737 - - - - - - 0.745 - 0.992 si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
28. CR847906.1 ENSDARG00000099493 88 1.724 1.000 - 0.724 - - - - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
29. KCNJ16 ENSDARG00000045039 59 1.675 - - - - 0.768 - 0.907 - - potassium inwardly-rectifying channel, subfamily J, member 16 [Source:ZFIN;Acc:ZDB-GENE-130603-81]
30. tbc1d22b ENSDARG00000026988 18 1.672 - - 0.809 - 0.863 - - - - TBC1 domain family, member 22B [Source:ZFIN;Acc:ZDB-GENE-091118-28]
31. comta ENSDARG00000015337 93 1.568 - - - - 0.825 - 0.743 - - catechol-O-methyltransferase a [Source:ZFIN;Acc:ZDB-GENE-050913-117]
32. dnajb13 ENSDARG00000043157 50 1.536 - - - 0.800 - - 0.736 - - DnaJ (Hsp40) homolog, subfamily B, member 13 [Source:ZFIN;Acc:ZDB-GENE-040910-4]
33. mfng ENSDARG00000042925 104 1.515 - - - - 0.797 - 0.718 - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-041130-1]
34. si:dkey-220k22.3 ENSDARG00000094693 166 1.467 0.722 - - - - - 0.745 - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
35. CABZ01071530.2 CABZ01071530.2 47 1.451 - - - 0.706 - - 0.745 - -
36. CU367845.1_1 CU367845.1_1 43 1 - - - - - - 1.000 - -
37. si:dkey-14o18.3 si:dkey-14o18.3 5 1 - - - - - - 1.000 - -
38. si:ch73-27e22.5 si:ch73-27e22.5 10 1 - - - - - - - 1.000 -
39. CR848029.1 CR848029.1 1 1 - - - - - - 1.000 - -
40. tceb3 40 1 1.000 - - - - - - - - transcription elongation factor B (SIII), polypeptide 3
41. lsm14b ENSDARG00000025386 23 1 - - - - - - 1.000 - - LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
42. si:ch73-388k15.1 si:ch73-388k15.1 0 1 - - - - - - 1.000 - -
43. CABZ01046432.1 ENSDARG00000079325 11 1 1.000 - - - - - - - - uncharacterized LOC100331045 [Source:NCBI gene;Acc:100331045]
44. CU652893.1 ENSDARG00000104131 3 1 - - - - - - 1.000 - -
45. FNDC3A ENSDARG00000105503 11 1 - - - - - - - 1.000 - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
46. si:dkey-272j9.1 si:dkey-272j9.1 10 1 - - - - - - 1.000 - -
47. U5_3 U5_3 3 1 - - - - - - - 1.000 -
48. zgc:172271 ENSDARG00000013240 2 1 - - - - - - 1.000 - - zgc:172271 [Source:ZFIN;Acc:ZDB-GENE-080204-110]
49. BX323882.1 ENSDARG00000101656 2 1 - - - - - - 1.000 - - butyrophilin subfamily 2 member A2-like [Source:NCBI gene;Acc:563995]
50. CABZ01054405.2 CABZ01054405.2 46 1 - - - - - - 1.000 - -
51. si:ch211-133l5.8 ENSDARG00000027676 23 1 1.000 - - - - - - - - si:ch211-133l5.8 [Source:ZFIN;Acc:ZDB-GENE-081104-118]
52. diaph3_1 ENSDARG00000090785 3 1 1.000 - - - - - - - - diaphanous-related formin 3 [Source:ZFIN;Acc:ZDB-GENE-040801-144]
53. si:dkey-16n15.6 ENSDARG00000095805 18 1 - - - - - - 1.000 - - si:dkey-16n15.6 [Source:ZFIN;Acc:ZDB-GENE-110411-70]
54. fech ENSDARG00000003462 212 1 - - - - - - 1.000 - - ferrochelatase [Source:ZFIN;Acc:ZDB-GENE-000928-1]
55. tmem86b ENSDARG00000038296 3 1 - - - - - - 1.000 - - transmembrane protein 86B [Source:ZFIN;Acc:ZDB-GENE-060825-132]
56. si:ch73-44m9.2 ENSDARG00000094821 101 1 - - - - - - 1.000 - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
57. ELFN2 ELFN2 7 1 - - - - - - 1.000 - -
58. ssrp1b ENSDARG00000016994 58 1 - - - - - - 1.000 - - structure specific recognition protein 1b [Source:ZFIN;Acc:ZDB-GENE-041008-209]
59. mb21d1 ENSDARG00000021572 12 1 - - - - - - 1.000 - - Mab-21 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-23]
60. kitb ENSDARG00000056133, ENSDARG00000113747 10 1 - - - - - - - 1.000 - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050916-2]
61. PEG3_10 PEG3_10 45 1 - - - - - - 1.000 - -
62. themis ENSDARG00000010619 5 1 - - - - - - 1.000 - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
63. gper gper 4 1 1.000 - - - - - - - -
64. tet1 ENSDARG00000075230, ENSDARG00000110764 8 1 - - - - - - 1.000 - - tet methylcytosine dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-090312-88]
65. cul4a ENSDARG00000096578 14 1 - - - - - - 1.000 - - cullin 4A [Source:ZFIN;Acc:ZDB-GENE-040426-1357]
66. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - - - 1.000 - -
67. BX004994.2 BX004994.2 17 1 1.000 - - - - - - - -
68. si:ch211-194e1.8 si:ch211-194e1.8 14 1 - - - - - - 1.000 - -
69. nt5dc1 ENSDARG00000006797 3 1 - - - - - - - 1.000 - 5'-nucleotidase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8274]
70. ulk4 ENSDARG00000004176 85 1 1.000 - - - - - - - - unc-51 like kinase 4 [Source:ZFIN;Acc:ZDB-GENE-100922-243]
71. zgc:195633_2 34 1 1.000 - - - - - - - - zgc:195633
72. LRTM1 ENSDARG00000098742 21 1 - - - - - - 1.000 - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
73. si:ch211-274p24.2 ENSDARG00000095185 92 1 - - - - - - 1.000 - - si:ch211-274p24.2 [Source:ZFIN;Acc:ZDB-GENE-050309-265]
74. si:ch211-196h16.12 ENSDARG00000028276 3 1 - - - - - - - 1.000 - si:ch211-196h16.12 [Source:ZFIN;Acc:ZDB-GENE-121214-351]
75. CR387932.1 ENSDARG00000097344 2 1 1.000 - - - - - - - -
76. si:dkeyp-51f12.2 ENSDARG00000095606 24 1 - - - - - - 1.000 - - si:dkeyp-51f12.2 [Source:ZFIN;Acc:ZDB-GENE-070705-546]
77. rsad1 ENSDARG00000077698, ENSDARG00000112179 93 1 1.000 - - - - - - - - radical S-adenosyl methionine domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2508]
78. CABZ01033205.2 CABZ01033205.2 5 1 - - - - - - 1.000 - -
79. tmem244 ENSDARG00000043847 3 1 - - - - - - - 1.000 - transmembrane protein 244 [Source:ZFIN;Acc:ZDB-GENE-040724-54]
80. ifit2 ifit2 11 1 - - - - - - 1.000 - -
81. CR753886.1 ENSDARG00000090548 22 1 - - - - - - 1.000 - - prolactin releasing hormone 2 [Source:NCBI gene;Acc:793765]
82. CABZ01077140.1 CABZ01077140.1 2 1 - - - - - - - 1.000 -
83. BX572630.2 BX572630.2 0 1 - - - - - - 1.000 - -
84. FHDC1_3 FHDC1_3 66 1 - - - - - - 1.000 - -
85. si:dkeyp-80d11.12 ENSDARG00000101728 4 1 - - - - - - 1.000 - - si:dkeyp-80d11.12 [Source:ZFIN;Acc:ZDB-GENE-070424-273]
86. znf330 ENSDARG00000020494 3 1 - - - - - - 1.000 - - zinc finger protein 330 [Source:ZFIN;Acc:ZDB-GENE-040426-2697]
87. VDAC3 ENSDARG00000003695 34 1 - - - - - - 1.000 - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
88. try 21 1 - - - - - - 1.000 - - trypsin
89. ANKRD34A 22 1 - - - - - - 1.000 - - ankyrin repeat domain 34A, transcript variant X2
90. RDM1 RDM1 28 1 - - - - - - 1.000 - -
91. BX255969.1 BX255969.1 16 1 - - - - - - 1.000 - -
92. CR936442.1 ENSDARG00000105592 2 1 - - - - - - 1.000 - -
93. abcg1 ENSDARG00000063475 97 1 1.000 - - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
94. wisp2 ENSDARG00000077882 3 1 - - - - - - 1.000 - - WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1]
95. or135-1 ENSDARG00000053648 1 1 1.000 - - - - - - - - odorant receptor, family H, subfamily 135, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-32]
96. GGA3 ENSDARG00000103667 0 1 - - - - - - - 1.000 - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
97. ms4a17a.4 ENSDARG00000014024 36 1 - - - - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 17A.4 [Source:ZFIN;Acc:ZDB-GENE-070822-16]
98. ppfia2 ENSDARG00000013000 45 1 - - - - - - 1.000 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7905]
99. HEPACAM ENSDARG00000112032 1 1 - - - - - - 1.000 - - hepatic and glial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:26361]
100. si:dkey-163m14.5 si:dkey-163m14.5 1 1 1.000 - - - - - - - -

There are 840 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA