Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-202e12.3

Gene Name Gene ID Reads Annotation
si:ch211-202e12.3 401 si:ch211-202e12.3, transcript variant X6










Genes with expression patterns similar to si:ch211-202e12.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-202e12.3 401 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-202e12.3, transcript variant X6
2. celf3a ENSDARG00000034668 2432 3.312 - - - - - 0.919 0.772 0.747 0.874 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
3. nrarpb ENSDARG00000018958 6225 3.112 - - - 0.723 - 0.928 0.707 - 0.754 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
4. fbxl16 ENSDARG00000060915 259 3.091 - - - 0.730 - 0.812 0.833 0.716 - F-box and leucine-rich repeat protein 16 [Source:ZFIN;Acc:ZDB-GENE-120215-180]
5. coe2 coe2 1633 3.062 - - - 0.707 - 0.814 - 0.793 0.748
6. DACT3_1 DACT3_1 1235 3.03 - - - 0.782 - 0.787 0.721 0.740 -
7. msl2a ENSDARG00000038909 1357 3.019 - - - - - 0.789 0.736 0.771 0.723 male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
8. pcdh19 ENSDARG00000034344 2378 2.993 - - - 0.767 - - 0.713 0.741 0.772 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
9. ctnnd2b ENSDARG00000003779 964 2.914 - - 0.700 0.753 - - 0.753 - 0.708 catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
10. st18 663 2.525 - - - - - 0.919 - 0.866 0.740 suppression of tumorigenicity 18, zinc finger
11. ADAM22 ENSDARG00000060532 2259 2.506 - - - - - 0.906 0.744 0.856 - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
12. bcl11ab ENSDARG00000063153 3032 2.504 - - - 0.826 - 0.818 - - 0.860 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
13. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 2.49 - - - - - 0.840 - 0.899 0.751 contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
14. fez1 ENSDARG00000023174 701 2.48 - - - - - 0.843 - 0.836 0.801 fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
15. myt1b ENSDARG00000102879 5411 2.476 - - - 0.792 - 0.953 0.731 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
16. relnl relnl 863 2.475 - - - 0.800 - 0.892 0.783 - -
17. stap2a ENSDARG00000092810 591 2.467 - - - - - 0.883 0.831 - 0.753 signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
18. zbtb18 ENSDARG00000028228 3653 2.458 - - - - - 0.917 - 0.720 0.821 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
19. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.456 - - - 0.720 - 0.884 - - 0.852 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
20. nes ENSDARG00000088805 2710 2.455 - - - 0.858 - 0.870 0.727 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
21. gap43 ENSDARG00000099744 4114 2.451 - - - - - 0.876 - 0.739 0.836 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
22. pou3f2a ENSDARG00000070220 817 2.451 - - - - - - 0.800 0.861 0.790 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
23. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.451 - - - 0.848 - - - 0.783 0.820 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
24. CYTH2 ENSDARG00000028800 2349 2.45 - - - - - 0.895 0.785 - 0.770 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
25. si:ch73-21g5.7 ENSDARG00000093156 9412 2.446 - - - - - 0.950 0.701 0.795 - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
26. ek1 ENSDARG00000020080 742 2.445 - - - 0.768 - 0.878 0.799 - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
27. her4.1 ENSDARG00000056732 1264 2.433 - - - - - 0.815 0.758 0.860 - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
28. ptprna ENSDARG00000058646 1327 2.43 - - - 0.721 - 0.889 0.820 - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
29. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 2.427 - - - - - 0.817 0.853 - 0.757 G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
30. rcor2 ENSDARG00000008278 1678 2.417 - - - - - 0.837 0.749 0.831 - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
31. lhx5 ENSDARG00000057936 785 2.416 - - - 0.761 - 0.816 - 0.839 - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
32. nrsn1 ENSDARG00000111235 123 2.414 - - - - - 0.805 0.890 0.719 - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
33. TUBA1A ENSDARG00000001889 25294 2.407 - - - 0.769 - 0.929 0.709 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
34. sept5b ENSDARG00000036031 188 2.396 - - - - - 0.921 - 0.763 0.712 septin 5b [Source:ZFIN;Acc:ZDB-GENE-040808-43]
35. nova2 ENSDARG00000017673 7685 2.388 - - - 0.774 - 0.857 0.757 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
36. vezf1a ENSDARG00000008247 1449 2.388 - - - - - 0.890 0.720 - 0.778 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
37. npas3b npas3b 1446 2.383 - - - 0.830 - 0.762 0.791 - -
38. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 2.373 - - - - - 0.787 - 0.822 0.764 cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
39. ptbp2b ENSDARG00000015901 2458 2.364 - - - - - 0.886 - 0.739 0.739 polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
40. ttc9b ENSDARG00000068421 251 2.356 - - - - - 0.877 - 0.760 0.719 tetratricopeptide repeat domain 9B [Source:ZFIN;Acc:ZDB-GENE-050419-67]
41. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.346 - - - 0.718 - - - 0.838 0.790 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
42. adcyap1b ENSDARG00000027740 1539 2.343 - - - - - 0.792 0.736 0.815 - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
43. nbeaa ENSDARG00000070080 862 2.341 - - - 0.802 - - - 0.739 0.800 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
44. VWA7 ENSDARG00000061462 816 2.325 - - - 0.724 - 0.738 0.863 - - von Willebrand factor A domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060503-234]
45. rap2ip rap2ip 681 2.317 - - - - - 0.861 - 0.703 0.753
46. sox2 ENSDARG00000070913 2763 2.311 - - - 0.711 - 0.825 0.775 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
47. marcksa ENSDARG00000004049 2518 2.31 - - - - - - 0.708 0.766 0.836 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
48. mllt11 ENSDARG00000071026 2518 2.31 - - - - - 0.869 - 0.733 0.708 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
49. DTX4 ENSDARG00000076302 2642 2.301 - - - - - 0.853 0.731 0.717 - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
50. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.293 - - - - - 0.721 0.787 0.785 - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
51. sema6a ENSDARG00000102165 1401 2.284 - - - - - 0.784 0.744 - 0.756 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
52. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.265 - - - 0.706 - 0.787 - - 0.772 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
53. nmnat2 ENSDARG00000004580 370 2.26 - - - - - 0.772 0.787 - 0.701 nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
54. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 2.259 - - - - - 0.734 - 0.766 0.759 zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
55. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.255 - - - - - 0.798 0.724 - 0.733 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
56. dpysl4 ENSDARG00000103490 534 2.245 - - - - - 0.711 - 0.743 0.791 dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
57. arnt2 ENSDARG00000103697 5731 2.245 - - - - - 0.761 - 0.781 0.703 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
58. zgc:112425 zgc:112425 293873 2.245 - - - 0.721 - 0.763 - 0.761 -
59. negr1 ENSDARG00000021607 1051 2.222 - - - - - 0.708 0.738 - 0.776 neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
60. nr4a2a ENSDARG00000017007 140 2.193 - - - - - - 0.753 0.713 0.727 nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
61. scrt1a ENSDARG00000100821 2687 2.182 - - - 0.706 - 0.733 - 0.743 - scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
62. nhlh2 ENSDARG00000025495 1860 2.154 - - - 0.711 - - 0.717 - 0.726 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
63. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.824 - - - - - 0.915 0.909 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
64. st8sia2 ENSDARG00000018788 2183 1.802 - - - 0.841 - 0.961 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
65. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.8 - - - - - 0.915 0.885 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
66. CDK5R1 CDK5R1 562 1.798 - - - - - 0.892 0.906 - -
67. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 1.79 - - - - - 0.890 0.900 - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
68. flrt1b ENSDARG00000075597 465 1.782 - - - - - 0.955 0.827 - - fibronectin leucine rich transmembrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-080327-6]
69. vim ENSDARG00000010008 3551 1.768 - - - - - 0.903 0.865 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
70. CU856359.2 CU856359.2 182 1.759 - - - - - 0.899 0.860 - -
71. atp1b4 ENSDARG00000053262 1337 1.755 - - - - - 0.902 0.853 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
72. ncana 1537 1.754 - - - - - 0.919 0.835 - - neurocan a
73. isl1 ENSDARG00000004023 981 1.748 - - - - - 0.948 0.800 - - ISL LIM homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-112]
74. CABZ01088330.1 CABZ01088330.1 679 1.718 - - - - - 0.927 0.791 - -
75. aplp1 ENSDARG00000098368 2317 1.717 - - - - - 0.938 - - 0.779 amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
76. zgc:113531 ENSDARG00000038794 2063 1.71 - - - - - 0.848 0.862 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
77. eno2 ENSDARG00000014287 2162 1.706 - - - - - 0.939 0.767 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
78. cnrip1a ENSDARG00000091683 1491 1.704 - - - - - 0.810 - 0.894 - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
79. slc1a3a ENSDARG00000104431 9888 1.703 - - - - - 0.875 0.828 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
80. cldn19 ENSDARG00000044569 281 1.702 - - - - - 0.856 0.846 - - claudin 19 [Source:ZFIN;Acc:ZDB-GENE-050417-242]
81. hmp19 2554 1.7 - - - - - 0.934 - - 0.766 HMP19 protein
82. tuba1c ENSDARG00000055216 8384 1.7 - - - - - 0.873 - - 0.827 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
83. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.692 - - - - - 0.897 - 0.795 - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
84. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.691 - - - - - 0.894 0.797 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
85. glra1 ENSDARG00000012019 315 1.688 - - - - - 0.900 0.788 - - glycine receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991117-1]
86. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.686 - - - - - 0.843 - - 0.843 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
87. TTYH1 ENSDARG00000076804 399 1.684 - - - - - 0.911 - - 0.773 tweety family member 1 [Source:ZFIN;Acc:ZDB-GENE-100922-257]
88. zic1 ENSDARG00000015567 2520 1.684 - - - - - 0.828 0.856 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
89. PROCA1 ENSDARG00000069823 343 1.679 - - - - - 0.763 0.916 - - protein interacting with cyclin A1 [Source:ZFIN;Acc:ZDB-GENE-110418-1]
90. kif5aa ENSDARG00000098936 2428 1.675 - - - - - 0.952 - - 0.723 kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
91. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 1.674 - - - 0.743 - 0.931 - - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
92. C7H4orf48 C7H4orf48 1455 1.671 - - - - - 0.863 - 0.808 -
93. ndrg4 ENSDARG00000103937 1234 1.671 - - - - - 0.882 - - 0.789 NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
94. tmtc2 tmtc2 798 1.667 - - - - - 0.800 0.867 - -
95. btg2 ENSDARG00000020298 6616 1.663 - - - - - 0.903 0.760 - - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
96. plp1a ENSDARG00000103732 3544 1.663 - - - - - 0.959 0.704 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
97. b4galt2 ENSDARG00000077994 480 1.66 - - - - - 0.895 0.765 - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-070912-258]
98. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.66 - - - - - - - 0.830 0.830 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
99. hmgb3a ENSDARG00000056725 15668 1.657 - - - - - 0.910 - - 0.747 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
100. nrn1a ENSDARG00000071860 1311 1.656 - - - - - 0.874 0.782 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]

There are 1535 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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