Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-201b11.3

Gene Name Gene ID Reads Annotation
si:ch211-201b11.3 si:ch211-201b11.3 2










Genes with expression patterns similar to si:ch211-201b11.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-201b11.3 si:ch211-201b11.3 2 4 - - 1.000 - - - 1.000 1.000 1.000
2. panx3 ENSDARG00000004627 7 2 - - 1.000 - - - - 1.000 - pannexin 3 [Source:ZFIN;Acc:ZDB-GENE-091204-114]
3. si:dkeyp-34c12.1 ENSDARG00000071083, ENSDARG00000113229 6 2 - - 1.000 - - - - - 1.000 si:dkeyp-34c12.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5347]
4. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1.832 - - 0.889 - - - - 0.943 - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
5. ms4a17a.1 ENSDARG00000043798 7 1.72 - - 0.720 - - - - 1.000 - membrane-spanning 4-domains, subfamily A, member 17A.1 [Source:ZFIN;Acc:ZDB-GENE-050417-307]
6. si:ch211-202m22.1 ENSDARG00000094491 24 1.702 - - 1.000 - - - - 0.702 - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
7. STRC ENSDARG00000105391 10 1.702 - - 1.000 - - - - 0.702 - stereocilin [Source:ZFIN;Acc:ZDB-GENE-160114-58]
8. si:dkey-121n8.5 si:dkey-121n8.5 10 1 - - - - - - - 1.000 -
9. si:dkey-14i17.1 si:dkey-14i17.1 1 1 - - 1.000 - - - - - -
10. unc5da ENSDARG00000092722 8 1 - - 1.000 - - - - - - unc-5 netrin receptor Da [Source:ZFIN;Acc:ZDB-GENE-080908-2]
11. si:ch211-196h16.4 ENSDARG00000094782 0 1 - - 1.000 - - - - - - si:ch211-196h16.4 [Source:ZFIN;Acc:ZDB-GENE-081029-1]
12. si:ch211-209p16.1 si:ch211-209p16.1 1 1 - - - - - - - - 1.000
13. CR536621.1 CR536621.1 2 1 - - 1.000 - - - - - -
14. FGFBP1 FGFBP1 7 1 - - 1.000 - - - - - -
15. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - - - - - - - - 1.000
16. si:rp71-1h20.2 si:rp71-1h20.2 0 1 - - 1.000 - - - - - -
17. si:dkey-16p19.8 ENSDARG00000096481 6 1 - - - - - - - 1.000 - si:dkey-16p19.8 [Source:ZFIN;Acc:ZDB-GENE-120709-67]
18. CAMKK1 CAMKK1 2 1 - - - - - - - - 1.000
19. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 1 - - - - - - - 1.000 - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
20. SNORD12_1 SNORD12_1 0 1 - - 1.000 - - - - - -
21. nkd3_1 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 1 1 - - 1.000 - - - - - - naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]
22. ralgps1 ENSDARG00000068370 39 1 - - 1.000 - - - - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16]
23. fsd1l ENSDARG00000059432, ENSDARG00000113444, ENSDARG00000114848 3 1 - - 1.000 - - - - - - fibronectin type III and SPRY domain containing 1-like [Source:ZFIN;Acc:ZDB-GENE-070501-9]
24. asb13a.2 ENSDARG00000045765, ENSDARG00000109879 8 1 - - 1.000 - - - - - - ankyrin repeat and SOCS box containing 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041210-88]
25. U1_7 U1_7 0 1 - - 1.000 - - - - - -
26. KIF25 ENSDARG00000017532 1 1 - - - - - - - - 1.000 kinesin family member 25 [Source:ZFIN;Acc:ZDB-GENE-041001-167]
27. mxd ENSDARG00000023369 8 1 - - 1.000 - - - - - - myxovirus (influenza virus) resistance D [Source:ZFIN;Acc:ZDB-GENE-030721-8]
28. si:dkeyp-117h8.10 si:dkeyp-117h8.10 16 1 - - 1.000 - - - - - -
29. ERC2 ENSDARG00000105178 0 1 - - - - - - - 1.000 - ELKS/RAB6-interacting/CAST family member 2 [Source:ZFIN;Acc:ZDB-GENE-130530-700]
30. PEG3_36 PEG3_36 3 1 - - 1.000 - - - - - -
31. PSKH2 PSKH2 1 1 - - 1.000 - - - - - -
32. rac1l_1 ENSDARG00000054649, ENSDARG00000096549 12 1 - - - - - - 1.000 - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
33. CU928126.3 CU928126.3 18 1 - - - - - - - - 1.000
34. paqr8 ENSDARG00000088828 4 1 - - - - - - - 1.000 - progestin and adipoQ receptor family member VIII [Source:ZFIN;Acc:ZDB-GENE-030728-3]
35. sox32 ENSDARG00000100591 2 1 - - 1.000 - - - - - - SRY (sex determining region Y)-box 32 [Source:ZFIN;Acc:ZDB-GENE-011026-1]
36. si:ch211-240b21.2 ENSDARG00000068279 2 1 - - - - - - - - 1.000 si:ch211-240b21.2 [Source:ZFIN;Acc:ZDB-GENE-060526-125]
37. PEG3_14 PEG3_14 2 1 - - 1.000 - - - - - -
38. BEGAIN_1 BEGAIN_1 7 1 - - 1.000 - - - - - -
39. cnnm1 1 1 - - - - - - - - 1.000 cyclin and CBS domain divalent metal cation transport mediator 1, transcript variant X3
40. zgc:110286 92 1 - - - - - - 1.000 - - zgc:110286
41. CABZ01112215.1 CABZ01112215.1 23 1 - - - - - - - 1.000 -
42. si:dkey-21o19.6 si:dkey-21o19.6 18 1 - - 1.000 - - - - - -
43. KNCN ENSDARG00000101899 1 1 - - - - - - - 1.000 - kinocilin [Source:ZFIN;Acc:ZDB-GENE-070705-385]
44. U4_1 U4_1 2 1 - - 1.000 - - - - - -
45. CABZ01092722.1 CABZ01092722.1 2 1 - - - - - - - - 1.000
46. CABZ01072856.1 CABZ01072856.1 0 1 - - 1.000 - - - - - -
47. CABZ01012080.1 CABZ01012080.1 10 1 - - 1.000 - - - - - -
48. zgc:171759_1 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 1 1 - - 1.000 - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
49. hbaa2 ENSDARG00000069735 10 1 - - 1.000 - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
50. si:ch73-256j6.4 ENSDARG00000078519, ENSDARG00000093574 3 1 - - - - - - - - 1.000 si:ch73-256j6.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3779]
51. SNORA53 SNORA53 10 1 - - 1.000 - - - - - -
52. INPP5A 1 1 - - 1.000 - - - - - - inositol polyphosphate-5-phosphatase A
53. b3gnt9 ENSDARG00000041616 0 1 - - 1.000 - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060503-611]
54. zgc:114037_5 6 1 - - 1.000 - - - - - - zgc:114037
55. prokr1a ENSDARG00000074182 2 1 - - 1.000 - - - - - - prokineticin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-110411-180]
56. si:ch211-274k16.6 si:ch211-274k16.6 26 1 - - - - - - - - 1.000
57. ppapdc1a ppapdc1a 1 1 - - - - - - - - 1.000
58. M1AP ENSDARG00000099485 1 1 - - - - - - - - 1.000 meiosis 1 associated protein [Source:ZFIN;Acc:ZDB-GENE-070410-19]
59. si:ch211-276k2.2 4 1 - - 1.000 - - - - - - si:ch211-276k2.2
60. si:ch211-285c6.2 ENSDARG00000079234 1 1 - - 1.000 - - - - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
61. CR855307.2 CR855307.2 1 1 - - 1.000 - - - - - -
62. wisp1a ENSDARG00000054331 26 1 - - - - - - - - 1.000 WNT1 inducible signaling pathway protein 1a [Source:ZFIN;Acc:ZDB-GENE-070705-178]
63. mir150 ENSDARG00000081593 4 1 - - 1.000 - - - - - - microRNA 150 [Source:NCBI gene;Acc:100033674]
64. CCDC171 ENSDARG00000027381 3 1 - - 1.000 - - - - - - coiled-coil domain containing 171 [Source:ZFIN;Acc:ZDB-GENE-110411-270]
65. HELZ2_2 ENSDARG00000012600 5 1 - - - - - - - 1.000 - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
66. si:dkeyp-35e5.10 ENSDARG00000107425 8 1 - - - - - - - 1.000 - si:dkeyp-35e5.10 [Source:ZFIN;Acc:ZDB-GENE-110913-63]
67. slc2a11l ENSDARG00000062873 1 1 - - 1.000 - - - - - - solute carrier family 2 (facilitated glucose transporter), member 11-like [Source:ZFIN;Acc:ZDB-GENE-061215-118]
68. zgc:162322 zgc:162322 1 1 - - 1.000 - - - - - -
69. C1QL1 1 1 - - - - - - - 1.000 - complement C1q like 1
70. SLC4A3 ENSDARG00000104005 2 1 - - 1.000 - - - - - - solute carrier family 4 (anion exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-141006-1]
71. has1 ENSDARG00000042983 2 1 - - - - - - - 1.000 - hyaluronan synthase 1 [Source:ZFIN;Acc:ZDB-GENE-040218-2]
72. AL929134.2 AL929134.2 5 1 - - - - - - - - 1.000
73. si:ch211-117m20.4 ENSDARG00000094286 7 1 - - - - - - - - 1.000 si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
74. BX897671.1 BX897671.1 10 1 - - - - - - - 1.000 -
75. BX248410.2 ENSDARG00000090277 4 1 - - - - - - - 1.000 - sialic acid-binding Ig-like lectin 7 [Source:NCBI gene;Acc:103910452]
76. 5S_rRNA_10 5S_rRNA_10 2 1 - - 1.000 - - - - - -
77. rxfp3.3a3 ENSDARG00000069246 5 1 - - - - - - - 1.000 - relaxin family peptide receptor 3.3a3 [Source:ZFIN;Acc:ZDB-GENE-050419-246]
78. si:rp71-7l19.7 si:rp71-7l19.7 1 1 - - 1.000 - - - - - -
79. CU695076.1 CU695076.1 7 1 - - 1.000 - - - - - -
80. kcnq3 ENSDARG00000060085 0 1 - - 1.000 - - - - - - potassium voltage-gated channel, KQT-like subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-301]
81. abcg2a ENSDARG00000100075 2 1 - - 1.000 - - - - - - ATP-binding cassette, sub-family G (WHITE), member 2a [Source:ZFIN;Acc:ZDB-GENE-050517-35]
82. ANO2 ENSDARG00000101363 1 1 - - 1.000 - - - - - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
83. si:dkey-211e20.3 si:dkey-211e20.3 1 1 - - 1.000 - - - - - -
84. syne2a_1 0 1 - - 1.000 - - - - - - spectrin repeat containing, nuclear envelope 2a
85. CABZ01075923.1 CABZ01075923.1 6 1 - - - - - - - 1.000 -
86. mtx3_1 ENSDARG00000090195 12 1 - - - - - - - 1.000 - metaxin 3 [Source:ZFIN;Acc:ZDB-GENE-021210-3]
87. si:dkey-111b14.1 si:dkey-111b14.1 3 1 - - - - - - - - 1.000
88. si:ch211-161n3.5 ENSDARG00000095981 1 1 - - - - - - - - 1.000 si:ch211-161n3.5 [Source:ZFIN;Acc:ZDB-GENE-110913-81]
89. si:ch73-36i7.2 si:ch73-36i7.2 5 1 - - 1.000 - - - - - -
90. STOX2 STOX2 0 1 - - 1.000 - - - - - -
91. pou4f3 ENSDARG00000006206 8 1 - - 1.000 - - - - - - POU class 4 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-24]
92. tyro3 ENSDARG00000005356 4 1 - - 1.000 - - - - - - TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
93. GARNL3 GARNL3 1 1 - - 1.000 - - - - - -
94. pcdh2g12 5 1 - - 1.000 - - - - - - protocadherin 2 gamma 12
95. ttc6 ENSDARG00000104125 7 1 - - 1.000 - - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
96. XPO5 ENSDARG00000098868 3 1 - - - - - - - - 1.000 exportin 5 [Source:HGNC Symbol;Acc:HGNC:17675]
97. mir124-1 10 1 - - 1.000 - - - - - - microRNA 124-1
98. si:dkey-191j3.2 ENSDARG00000101997 1 1 - - 1.000 - - - - - - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
99. CU468041.1 ENSDARG00000092125 1 1 - - 1.000 - - - - - -
100. gata2b ENSDARG00000009094 16 1 - - 1.000 - - - - - - GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440]

There are 424 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA