Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-200o1.1

Gene Name Gene ID Reads Annotation
si:ch211-200o1.1 si:ch211-200o1.1 2










Genes with expression patterns similar to si:ch211-200o1.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-200o1.1 si:ch211-200o1.1 2 2 - - - - 1.000 - - - 1.000
2. CABZ01038329.1 CABZ01038329.1 8 1 - - - - 1.000 - - - -
3. ZNF135 ZNF135 14 1 - - - - - - - - 1.000
4. si:dkey-30f3.2 ENSDARG00000098087 6 1 - - - - 1.000 - - - - si:dkey-30f3.2 [Source:ZFIN;Acc:ZDB-GENE-110913-70]
5. smtna ENSDARG00000074652 6 1 - - - - 1.000 - - - - smoothelin a [Source:ZFIN;Acc:ZDB-GENE-091204-245]
6. si:dkey-248g17.3 si:dkey-248g17.3 34 1 - - - - 1.000 - - - -
7. si:ch211-12e13.4 si:ch211-12e13.4 0 1 - - - - 1.000 - - - -
8. mgp ENSDARG00000086189 9 1 - - - - 1.000 - - - - matrix Gla protein [Source:ZFIN;Acc:ZDB-GENE-060928-1]
9. adgra1a ENSDARG00000054177 19 0.984 - - - - 0.984 - - - - adhesion G protein-coupled receptor A1a [Source:ZFIN;Acc:ZDB-GENE-130603-101]
10. CABZ01073099.1 CABZ01073099.1 1 0.972 - - - - - - - - 0.972
11. C18H15orf48 C18H15orf48 3 0.972 - - - - - - - - 0.972
12. SLITRK1 2 0.972 - - - - - - - - 0.972 SLIT and NTRK like family member 1
13. MYO15B ENSDARG00000074852 6 0.972 - - - - - - - - 0.972 myosin XVB [Source:ZFIN;Acc:ZDB-GENE-030131-4797]
14. CU571333.2 CU571333.2 1 0.972 - - - - - - - - 0.972
15. CR392364.1 CR392364.1 1 0.972 - - - - - - - - 0.972
16. si:ch211-209j12.3 ENSDARG00000100568 2 0.972 - - - - - - - - 0.972 si:ch211-209j12.3 [Source:ZFIN;Acc:ZDB-GENE-120709-21]
17. NOX4 3 0.972 - - - - - - - - 0.972 NADPH oxidase 4
18. RGS14 RGS14 15 0.972 - - - - - - - - 0.972
19. cnn1a ENSDARG00000017193 6 0.972 - - - - - - - - 0.972 calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
20. CABZ01067080.1 ENSDARG00000109240 1 0.972 - - - - - - - - 0.972 interferon-induced very large GTPase 1-like [Source:NCBI gene;Acc:101883914]
21. GCNT4 GCNT4 66 0.972 - - - - - - - - 0.972
22. cryabb ENSDARG00000101380, ENSDARG00000109545 8 0.972 - - - - - - - - 0.972 crystallin, alpha B, b [Source:ZFIN;Acc:ZDB-GENE-040718-419]
23. nexn_1 ENSDARG00000057317 1 0.972 - - - - - - - - 0.972 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
24. lhfpl5b ENSDARG00000056458, ENSDARG00000111760 1 0.972 - - - - - - - - 0.972 LHFPL tetraspan subfamily member 5b [Source:ZFIN;Acc:ZDB-GENE-080220-51]
25. si:dkey-49n23.3 ENSDARG00000095325 4 0.972 - - - - - - - - 0.972 si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
26. mhc1zca ENSDARG00000069471 21 0.972 - - - - - - - - 0.972 major histocompatibility complex class I ZCA [Source:ZFIN;Acc:ZDB-GENE-070424-4]
27. chia.4 ENSDARG00000008541 14 0.966 - - - - - - - - 0.966 chitinase, acidic.4 [Source:ZFIN;Acc:ZDB-GENE-030131-9279]
28. gig2n gig2n 5 0.963 - - - - - - - - 0.963
29. fam131c ENSDARG00000037320 6 0.958 - - - - 0.958 - - - - family with sequence similarity 131, member C [Source:ZFIN;Acc:ZDB-GENE-050706-119]
30. rs1 rs1 70 0.958 - - - - 0.958 - - - -
31. spire2 ENSDARG00000003084 6 0.947 - - - - - - - - 0.947 spire-type actin nucleation factor 2 [Source:ZFIN;Acc:ZDB-GENE-041114-29]
32. KBTBD11 ENSDARG00000104958 8 0.943 - - - - - - - - 0.943 kelch repeat and BTB (POZ) domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-130530-678]
33. tmem125b ENSDARG00000075980 2 0.942 - - - - 0.942 - - - - transmembrane protein 125b [Source:ZFIN;Acc:ZDB-GENE-080220-54]
34. BX537305.1 ENSDARG00000113834 10 0.938 - - - - - - - - 0.938
35. zgc:112234_2 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 33 0.938 - - - - 0.938 - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
36. zgc:173652 22 0.931 - - - - - - - - 0.931 zgc:173652
37. si:dkey-30j10.5 ENSDARG00000093186 13 0.926 - - - - - - - - 0.926 si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
38. syt5b ENSDARG00000011640 70 0.916 - - - - 0.916 - - - - synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
39. tcf21 ENSDARG00000036869, ENSDARG00000111209 37 0.915 - - - - 0.915 - - - - transcription factor 21 [Source:ZFIN;Acc:ZDB-GENE-051113-88]
40. slc7a14b ENSDARG00000079231 6 0.908 - - - - - - - - 0.908 solute carrier family 7, member 14b [Source:ZFIN;Acc:ZDB-GENE-091113-47]
41. dbh ENSDARG00000069446, ENSDARG00000114942 60 0.905 - - - - 0.905 - - - - dopamine beta-hydroxylase (dopamine beta-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-990621-3]
42. zgc:171506 ENSDARG00000078206, ENSDARG00000112252 3 0.903 - - - - - - - - 0.903 zgc:171506 [Source:ZFIN;Acc:ZDB-GENE-080204-96]
43. si:dkeyp-75d2.5 si:dkeyp-75d2.5 21 0.895 - - - - - - - - 0.895
44. CABZ01075242.1 ENSDARG00000114227 9 0.895 - - - - - - - - 0.895
45. si:ch211-271g18.4 ENSDARG00000115564 197 0.884 - - - - - - - - 0.884 si:ch211-271g18.4 [Source:ZFIN;Acc:ZDB-GENE-110914-58]
46. TNFRSF14_3 TNFRSF14_3 135 0.878 - - - - - - - - 0.878
47. th ENSDARG00000030621, ENSDARG00000109947 6 0.873 - - - - 0.873 - - - - tyrosine hydroxylase [Source:ZFIN;Acc:ZDB-GENE-990621-5]
48. cpne5 cpne5 16 0.871 - - - - - - - - 0.871
49. si:dkey-58f10.13 ENSDARG00000095532 11 0.871 - - - - - - - - 0.871 si:dkey-58f10.13 [Source:ZFIN;Acc:ZDB-GENE-060526-315]
50. CR848814.2 CR848814.2 19 0.862 - - - - - - - - 0.862
51. CCL-C11B CCL-C11B 51 0.856 - - - - - - - - 0.856
52. slco4a1 ENSDARG00000075948 74 0.855 - - - - - - - - 0.855 solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
53. slc6a2 ENSDARG00000016141 49 0.85 - - - - 0.850 - - - - solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
54. tg ENSDARG00000020084 40 0.847 - - - - - - - - 0.847 thyroglobulin [Source:ZFIN;Acc:ZDB-GENE-030519-1]
55. trhrb ENSDARG00000036159 11 0.843 - - - - 0.843 - - - - thyrotropin-releasing hormone receptor b [Source:ZFIN;Acc:ZDB-GENE-060503-382]
56. sgms2 57 0.842 - - - - - - - - 0.842 sphingomyelin synthase 2, transcript variant X1
57. lyve1b ENSDARG00000062483 14 0.841 - - - - - - - - 0.841 lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
58. acta2 ENSDARG00000045180 96 0.839 - - - - 0.839 - - - - actin, alpha 2, smooth muscle, aorta [Source:ZFIN;Acc:ZDB-GENE-030131-1229]
59. ETV3L ETV3L 67 0.824 - - - - 0.824 - - - -
60. p2rx8 ENSDARG00000024139 25 0.817 - - - - - - - - 0.817 purinergic receptor P2X, ligand-gated ion channel, 8 [Source:ZFIN;Acc:ZDB-GENE-030319-7]
61. kcnab1 kcnab1 10 0.814 - - - - - - - - 0.814
62. si:dkey-250k15.4 ENSDARG00000092169 19 0.812 - - - - - - - - 0.812 si:dkey-250k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-254]
63. si:ch211-260o22.1 si:ch211-260o22.1 34 0.808 - - - - 0.808 - - - -
64. p4ha3 ENSDARG00000103692 2 0.806 - - - - 0.806 - - - - prolyl 4-hydroxylase, alpha polypeptide III [Source:ZFIN;Acc:ZDB-GENE-041010-4]
65. si:dkey-15h8.6 si:dkey-15h8.6 13 0.806 - - - - 0.806 - - - -
66. chrnb3b ENSDARG00000038508 7 0.802 - - - - - - - - 0.802 cholinergic receptor, nicotinic, beta 3b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-030102-4]
67. pax1b ENSDARG00000073814 105 0.799 - - - - 0.799 - - - - paired box 1b [Source:ZFIN;Acc:ZDB-GENE-060503-372]
68. si:ch211-113a14.14 si:ch211-113a14.14 3 0.78 - - - - 0.780 - - - -
69. wee1 ENSDARG00000093864, ENSDARG00000114333, ENSDARG00000115653 1 0.78 - - - - 0.780 - - - - WEE1 G2 checkpoint kinase [Source:ZFIN;Acc:ZDB-GENE-030131-5268]
70. pth2 ENSDARG00000022951 7 0.78 - - - - 0.780 - - - - parathyroid hormone 2 [Source:ZFIN;Acc:ZDB-GENE-041102-1]
71. AL929217.1 ENSDARG00000059891 1 0.78 - - - - 0.780 - - - - gamma-aminobutyric acid receptor subunit pi-like [Source:NCBI gene;Acc:562831]
72. CU695216.1 CU695216.1 0 0.78 - - - - 0.780 - - - -
73. CCDC96 ENSDARG00000035963 5 0.78 - - - - 0.780 - - - - coiled-coil domain containing 96 [Source:ZFIN;Acc:ZDB-GENE-081022-156]
74. fubp3 ENSDARG00000086896 21 0.78 - - - - 0.780 - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
75. utrnp 0 0.78 - - - - 0.780 - - - - utrophin, pseudogene
76. prelp ENSDARG00000070597 99 0.78 - - - - 0.780 - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
77. BX119910.9 BX119910.9 7 0.78 - - - - 0.780 - - - -
78. UNC119 UNC119 104 0.78 - - - - 0.780 - - - -
79. SOX8 SOX8 22 0.78 - - - - 0.780 - - - -
80. BX294653.4 BX294653.4 1 0.78 - - - - 0.780 - - - -
81. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 0.78 - - - - 0.780 - - - -
82. fancl ENSDARG00000007885 0 0.78 - - - - 0.780 - - - - FA complementation group L [Source:ZFIN;Acc:ZDB-GENE-040426-1045]
83. DGKG ENSDARG00000062696 1 0.78 - - - - 0.780 - - - - diacylglycerol kinase, gamma [Source:ZFIN;Acc:ZDB-GENE-081105-39]
84. CR749167.1 ENSDARG00000100165 38 0.78 - - - - 0.780 - - - -
85. TRIM8 TRIM8 5 0.78 - - - - 0.780 - - - -
86. hp ENSDARG00000051890, ENSDARG00000095807 4 0.78 - - - - 0.780 - - - - haptoglobin [Source:ZFIN;Acc:ZDB-GENE-030131-1259]
87. CMA1_6 CMA1_6 2 0.78 - - - - 0.780 - - - -
88. pcdh2g16 1 0.78 - - - - 0.780 - - - - protocadherin 2 gamma 16
89. si:dkeyp-35e5.5 ENSDARG00000104026 3 0.78 - - - - 0.780 - - - - si:dkeyp-35e5.5 [Source:ZFIN;Acc:ZDB-GENE-050420-335]
90. glis1b ENSDARG00000027933 14 0.78 - - - - 0.780 - - - - GLIS family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-081105-172]
91. trim108 ENSDARG00000061762, ENSDARG00000114698 5 0.78 - - - - 0.780 - - - - tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
92. Mar-11 Mar-11 5 0.78 - - - - 0.780 - - - -
93. si:dkey-206f10.5 si:dkey-206f10.5 1 0.78 - - - - 0.780 - - - -
94. sagb ENSDARG00000038378 28 0.78 - - - - 0.780 - - - - S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
95. CABZ01058422.1 CABZ01058422.1 0 0.78 - - - - 0.780 - - - -
96. si:dkey-231k6.6 si:dkey-231k6.6 2 0.78 - - - - 0.780 - - - -
97. Vault_1 Vault_1 6 0.78 - - - - 0.780 - - - -
98. zgc:171887 ENSDARG00000058791 0 0.78 - - - - 0.780 - - - - zgc:171887 [Source:ZFIN;Acc:ZDB-GENE-080220-39]
99. CABZ01029902.1 CABZ01029902.1 0 0.78 - - - - 0.780 - - - -
100. htr5a htr5a 4 0.78 - - - - 0.780 - - - -

There are 135 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA