Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-1f22.17

Gene Name Gene ID Reads Annotation
si:ch211-1f22.17 si:ch211-1f22.17 10










Genes with expression patterns similar to si:ch211-1f22.17

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-1f22.17 si:ch211-1f22.17 10 5 - - 1.000 - 1.000 1.000 1.000 1.000 -
2. kcnj1a.2 ENSDARG00000090866 8 1.831 - - 0.831 - - - 1.000 - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050327-22]
3. BX572077.3 BX572077.3 20 1.812 - - - - - 0.812 1.000 - -
4. ncs1b ENSDARG00000054186 252 1.776 - - - - - 0.776 1.000 - - neuronal calcium sensor 1b [Source:ZFIN;Acc:ZDB-GENE-050930-1]
5. BX323819.1 BX323819.1 9 1.759 - - - - - 0.759 1.000 - -
6. CR762484.2 CR762484.2 42 1.703 - - - - 0.703 - 1.000 - -
7. si:ch211-229d2.5 ENSDARG00000079119 95 1.55 - - - - - 0.711 0.839 - - si:ch211-229d2.5 [Source:ZFIN;Acc:ZDB-GENE-121214-200]
8. LRRC30 LRRC30 83 1.505 - - - - - 0.759 0.746 - -
9. mblac2 ENSDARG00000059689 62 1.495 - - - - 0.762 - 0.733 - - metallo-beta-lactamase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-313]
10. GRID1 GRID1 51 1.458 - - 0.736 - - - 0.722 - -
11. RNH1_2 RNH1_2 12 1 - - - - - - 1.000 - -
12. lrmp ENSDARG00000045574 26 1 - - - - - - 1.000 - - lymphoid-restricted membrane protein [Source:ZFIN;Acc:ZDB-GENE-041210-152]
13. PLCG2 ENSDARG00000068763 11 1 - - - - - - 1.000 - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
14. ROCK2 ROCK2 8 1 - - - - - - 1.000 - -
15. zgc:195077 ENSDARG00000070852 1 1 - - - - - - 1.000 - - zgc:195077 [Source:ZFIN;Acc:ZDB-GENE-080724-9]
16. tmem37 ENSDARG00000059305 19 1 - - - - - - 1.000 - - transmembrane protein 37 [Source:ZFIN;Acc:ZDB-GENE-040426-2208]
17. thnsl2 ENSDARG00000032584 59 1 - - - - - - 1.000 - - threonine synthase-like 2 [Source:ZFIN;Acc:ZDB-GENE-051127-19]
18. TRIM14_10 TRIM14_10 9 1 - - - - - - 1.000 - -
19. cyp2aa12 ENSDARG00000102805 3 1 - - - - - 1.000 - - - cytochrome P450, family 2, subfamily AA, polypeptide 12 [Source:ZFIN;Acc:ZDB-GENE-071004-47]
20. si:dkey-11d20.4 si:dkey-11d20.4 6 1 - - - - - - 1.000 - -
21. BX323854.1 ENSDARG00000030778 3 1 - - - - - - 1.000 - -
22. VGLL2 VGLL2 13 1 - - - - - - 1.000 - -
23. zgc:198241 ENSDARG00000076483, ENSDARG00000116081 3 1 - - - - - - 1.000 - - zgc:198241 [Source:ZFIN;Acc:ZDB-GENE-080303-14]
24. lmod2b ENSDARG00000045864 63 1 - - - - - - 1.000 - - leiomodin 2 (cardiac) b [Source:ZFIN;Acc:ZDB-GENE-041210-356]
25. ENDOD1_1 ENDOD1_1 0 1 - - - - - - 1.000 - -
26. st3gal1l ENSDARG00000079310 10 1 - - - - - - 1.000 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-060321-2]
27. ponzr6 ENSDARG00000036382 16 1 - - - - - - 1.000 - - plac8 onzin related protein 6 [Source:ZFIN;Acc:ZDB-GENE-081104-326]
28. si:ch211-93g21.3 si:ch211-93g21.3 1 1 - - - - - - 1.000 - -
29. ubxn1 ENSDARG00000090309 17 1 - - - - - 1.000 - - - UBX domain protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-792]
30. tusc3 ENSDARG00000078854 4 1 - - - - - - 1.000 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
31. TRIM14_12 TRIM14_12 1 1 - - - - - - 1.000 - -
32. qkib ENSDARG00000002026 15 1 - - - - - - 1.000 - - QKI, KH domain containing, RNA binding b [Source:ZFIN;Acc:ZDB-GENE-081028-54]
33. BX511065.1 BX511065.1 214 1 - - - - - - 1.000 - -
34. POLQ ENSDARG00000044622, ENSDARG00000110374 94 1 - - - - - - 1.000 - - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
35. ebf1b ENSDARG00000069196 64 1 - - - - - - 1.000 - - early B cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]
36. NPC1L1 ENSDARG00000099558 0 1 - - - - - - 1.000 - - NPC1 like intracellular cholesterol transporter 1 [Source:HGNC Symbol;Acc:HGNC:7898]
37. ACTN4 ENSDARG00000099786 25 1 - - - - - - 1.000 - - actinin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-030131-940]
38. trim35-29 ENSDARG00000055730 24 1 - - - - - - 1.000 - - tripartite motif containing 35-29 [Source:ZFIN;Acc:ZDB-GENE-041114-35]
39. KSR1 KSR1 8 1 - - - - - - 1.000 - -
40. BCAM ENSDARG00000090190 19 1 - - - - - - 1.000 - - basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
41. mfsd10 ENSDARG00000086786 304 1 - - - - - - 1.000 - - major facilitator superfamily domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050417-154]
42. cmlc1 ENSDARG00000032976 455 1 - - - - - - 1.000 - - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
43. mov10b.2 ENSDARG00000056065, ENSDARG00000111814 3 1 - - - - - - 1.000 - - Moloney leukemia virus 10b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060526-371]
44. casp3b ENSDARG00000055045 54 1 - - - - - - 1.000 - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
45. zgc:173716 9 1 - - - - - - 1.000 - - zgc:173716
46. msnb ENSDARG00000028740, ENSDARG00000109311, ENSDARG00000110190 24 1 - - - - - - 1.000 - - moesin b [Source:ZFIN;Acc:ZDB-GENE-030717-7]
47. si:ch211-223g7.7 si:ch211-223g7.7 1 1 - - - - - - 1.000 - -
48. MXRA5 MXRA5 58 1 - - - - - - 1.000 - -
49. lrrc38 lrrc38 20 1 - - - - - - 1.000 - -
50. akap1a ENSDARG00000089802 5 1 - - - - - - 1.000 - - A kinase (PRKA) anchor protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5980]
51. pvalb5 ENSDARG00000032836 242 1 - - - - - - 1.000 - - parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336]
52. si:ch211-105d18.7 si:ch211-105d18.7 6 1 - - - - 1.000 - - - -
53. he1b 11900 1 - - - - - - 1.000 - - hatching enzyme 1b
54. zgc:194189 ENSDARG00000008010 26 1 - - - - - - 1.000 - - zgc:194189 [Source:ZFIN;Acc:ZDB-GENE-081022-71]
55. CU681840.1 CU681840.1 3 1 - - - - - - 1.000 - -
56. PLA2G10 PLA2G10 9 1 - - - - - - 1.000 - -
57. tex30 ENSDARG00000030636, ENSDARG00000111168 36 1 - - - - - - 1.000 - - testis expressed 30 [Source:ZFIN;Acc:ZDB-GENE-041210-219]
58. si:ch211-250o15.5 si:ch211-250o15.5 1 1 - - - - - - 1.000 - -
59. BTBD17_1 BTBD17_1 42 1 - - - - - - 1.000 - -
60. GRM1 GRM1 4 1 - - - - - - 1.000 - -
61. SNORA26 SNORA26 1 1 - - - - - - 1.000 - -
62. npas4a ENSDARG00000055752 5 1 - - - - - 1.000 - - - neuronal PAS domain protein 4a [Source:ZFIN;Acc:ZDB-GENE-060616-396]
63. TXNRD2 TXNRD2 14 1 - - - - - - 1.000 - -
64. aste1 5 1 - - - - - - 1.000 - - asteroid homolog 1 (Drosophila)
65. MFAP4_3 MFAP4_3 7 1 - - - - - - 1.000 - -
66. si:dkey-201i6.6 si:dkey-201i6.6 2 1 - - - - - - 1.000 - -
67. zgc:154142 ENSDARG00000100792 42 1 - - - - - - 1.000 - - zgc:154142 [Source:ZFIN;Acc:ZDB-GENE-070615-2]
68. radil ENSDARG00000079779 14 1 - - - - - - 1.000 - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
69. C4H12orf39 C4H12orf39 73 1 - - - - - - 1.000 - -
70. GLS2 GLS2 10 1 - - - - - - 1.000 - -
71. chrna9 ENSDARG00000054680 4 1 - - - - - - 1.000 - - cholinergic receptor, nicotinic, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-090312-63]
72. si:dkey-57b6.4 si:dkey-57b6.4 3 1 - - - - - - 1.000 - -
73. si:dkey-1j5.4 ENSDARG00000073747 1 1 - - - - - - 1.000 - - si:dkey-1j5.4 [Source:ZFIN;Acc:ZDB-GENE-130603-91]
74. kcnab1 kcnab1 10 1 - - - - - - 1.000 - -
75. SLC9B1 SLC9B1 137 1 - - - - - - 1.000 - -
76. CU467646.3 ENSDARG00000099076 36 1 - - - - - - 1.000 - - mucin-2-like [Source:NCBI gene;Acc:108179180]
77. atp2b1b ENSDARG00000007788 56 1 - - - - - - 1.000 - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
78. myd88 ENSDARG00000010169 86 1 - - - - - - 1.000 - - myeloid differentiation primary response 88 [Source:ZFIN;Acc:ZDB-GENE-040219-3]
79. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 1 - - - - - - 1.000 - - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
80. fam151a ENSDARG00000058218 40 1 - - - - - - 1.000 - - family with sequence similarity 151, member A [Source:ZFIN;Acc:ZDB-GENE-070705-105]
81. prpf3_1 ENSDARG00000086425, ENSDARG00000116776 84 1 - - - - - - 1.000 - - PRP3 pre-mRNA processing factor 3 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040823-3]
82. cyp1c2 ENSDARG00000101789 3 1 - - - - - - 1.000 - - cytochrome P450, family 1, subfamily C, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050705-1]
83. UBAC2_1 UBAC2_1 23 1 - - - - - - 1.000 - -
84. tnni2a.1 ENSDARG00000045592 15 1 - - - - - - 1.000 - - troponin I type 2a (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041114-60]
85. CT025887.1 ENSDARG00000114574 1 1 - - - - - - 1.000 - - uncharacterized LOC110440185 [Source:NCBI gene;Acc:110440185]
86. klhl24 klhl24 40 1 - - - - - - 1.000 - -
87. si:dkey-279j5.1 ENSDARG00000101459 17 1 - - - - - - 1.000 - - si:dkey-279j5.1 [Source:ZFIN;Acc:ZDB-GENE-120703-27]
88. CT027682.3 CT027682.3 0 1 - - - - - - 1.000 - -
89. socs1a ENSDARG00000038095 20 1 - - - - - - 1.000 - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
90. CABZ01048021.1 CABZ01048021.1 15 1 - - - - - - 1.000 - -
91. asb2a_1 asb2a_1 6 1 - - - - - - 1.000 - -
92. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 1 - - - - - - 1.000 - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
93. prom1b ENSDARG00000034007, ENSDARG00000111216, ENSDARG00000111262 14 1 - - - - - - 1.000 - - prominin 1 b [Source:ZFIN;Acc:ZDB-GENE-031003-1]
94. cacng5a ENSDARG00000003326 17 1 - - - - - - 1.000 - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
95. CU695006.1 CU695006.1 4 1 - - - - - - 1.000 - -
96. WIPF1 WIPF1 32 1 - - - - - - 1.000 - -
97. XCR1 XCR1 9 1 - - - - - - 1.000 - -
98. si:ch211-203l7.3 si:ch211-203l7.3 0 1 - - - - - - 1.000 - -
99. ptchd4 ENSDARG00000008249 17 1 - - - - - 1.000 - - - patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]
100. gpr75 ENSDARG00000098526 32 1 - - - - - - 1.000 - - G protein-coupled receptor 75 [Source:ZFIN;Acc:ZDB-GENE-100316-3]

There are 330 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA