Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-198n5.11

Gene Name Gene ID Reads Annotation
si:ch211-198n5.11 ENSDARG00000054400, ENSDARG00000112640 97 si:ch211-198n5.11 [Source:ZFIN;Acc:ZDB-GENE-050411-52]










Genes with expression patterns similar to si:ch211-198n5.11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-198n5.11 ENSDARG00000054400, ENSDARG00000112640 97 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-198n5.11 [Source:ZFIN;Acc:ZDB-GENE-050411-52]
2. zgc:173480 171 1.811 0.963 - - - - - - 0.848 - zgc:173480
3. atrip ENSDARG00000063076 385 1.743 - - - - - 0.822 - 0.921 - ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
4. leprel4 leprel4 34 1.716 - 0.946 - - - - 0.770 - -
5. dfna5 dfna5 361 1.695 - 0.780 - - - - 0.915 - -
6. spon2a ENSDARG00000025465, ENSDARG00000115300 294 1.68 - 0.792 - - - - - 0.888 - spondin 2a, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-160]
7. RHBDF1 RHBDF1 131 1.67 0.738 - - - - - - 0.932 -
8. setd1ba ENSDARG00000060847, ENSDARG00000111265 146 1.661 - 0.896 - - - 0.765 - - - SET domain containing 1B, a [Source:ZFIN;Acc:ZDB-GENE-050309-289]
9. ptgis ENSDARG00000060094, ENSDARG00000113227 82 1.661 - 0.938 - - - 0.723 - - - prostaglandin I2 (prostacyclin) synthase [Source:ZFIN;Acc:ZDB-GENE-070116-1]
10. fam8a1 fam8a1 561 1.647 - - - - - - 0.738 0.909 -
11. nphp4 ENSDARG00000069014 77 1.644 0.708 - - - - - - 0.936 - nephronophthisis 4 [Source:ZFIN;Acc:ZDB-GENE-060503-715]
12. BX569778.1 BX569778.1 36 1.637 0.841 - - - - - 0.796 - -
13. BX649554.3_1 BX649554.3_1 1071 1.626 0.897 - - - - 0.729 - - -
14. ccbl1 702 1.614 0.824 - - - - 0.790 - - - cysteine conjugate-beta lyase, cytoplasmic, transcript variant X1
15. pdxka ENSDARG00000088959 217 1.611 - - - - - 0.835 0.776 - - pyridoxal (pyridoxine, vitamin B6) kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8376]
16. si:ch211-282k23.2 ENSDARG00000093591 447 1.609 0.709 - - - - - - 0.900 - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
17. camk2b1 ENSDARG00000011065 79 1.609 0.907 - - - - 0.702 - - - calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9588]
18. CABZ01065246.2 CABZ01065246.2 45 1.598 - 0.890 - - - 0.708 - - -
19. mctp2b ENSDARG00000073970 238 1.591 0.829 - - - - 0.762 - - - multiple C2 domains, transmembrane 2b [Source:ZFIN;Acc:ZDB-GENE-050506-136]
20. STYK1_1 STYK1_1 34 1.589 0.720 0.869 - - - - - - -
21. hax1 ENSDARG00000036764 617 1.58 - - - - - 0.726 - 0.854 - HCLS1 associated protein X-1 [Source:ZFIN;Acc:ZDB-GENE-040718-26]
22. BX005085.3 ENSDARG00000103450 45 1.568 0.853 - - - - 0.715 - - -
23. TEAD1 TEAD1 43 1.562 0.841 - - - - 0.721 - - -
24. si:ch211-199m9.3 50 1.556 0.710 - - - - 0.846 - - - si:ch211-199m9.3, transcript variant X3
25. C11H1orf116 C11H1orf116 9 1.556 0.841 - - - - 0.715 - - -
26. SPINK4 ENSDARG00000091609 44 1.554 - - - - - 0.827 0.727 - - serine peptidase inhibitor, Kazal type 4 [Source:ZFIN;Acc:ZDB-GENE-130821-1]
27. GPR26 ENSDARG00000074389, ENSDARG00000116243 21 1.526 0.788 0.738 - - - - - - - G protein-coupled receptor 26 [Source:ZFIN;Acc:ZDB-GENE-131121-131]
28. rab9b ENSDARG00000103391 813 1.524 0.750 - - - - 0.774 - - - RAB9B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-091118-112]
29. zgc:172128 ENSDARG00000101883, ENSDARG00000104208 28 1.519 - 0.738 - - - - 0.781 - - zgc:172128 [Source:ZFIN;Acc:ZDB-GENE-080220-2]
30. FP236810.2 ENSDARG00000113218 140 1.518 0.766 - - - - 0.752 - - - UDP-glucuronosyltransferase 2B20-like [Source:NCBI gene;Acc:571561]
31. ttll3 ENSDARG00000053728 7 1.508 - 0.753 - - - - 0.755 - - tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
32. C3AR1 18 1.505 - 0.738 - - - - 0.767 - - C3a anaphylatoxin chemotactic receptor
33. si:dkey-98j1.5 ENSDARG00000094005 10 1.493 - 0.738 - - - - 0.755 - - si:dkey-98j1.5 [Source:ZFIN;Acc:ZDB-GENE-090313-358]
34. urod ENSDARG00000006818 856 1.485 - - - - - 0.757 0.728 - - uroporphyrinogen decarboxylase [Source:ZFIN;Acc:ZDB-GENE-000208-18]
35. si:ch211-10m5.3 si:ch211-10m5.3 10 1.482 - 0.738 - - - 0.744 - - -
36. ppp1r42 ENSDARG00000057632 32 1.482 0.739 - - - - 0.743 - - - protein phosphatase 1, regulatory subunit 42 [Source:ZFIN;Acc:ZDB-GENE-040704-43]
37. DYRK3 ENSDARG00000070600, ENSDARG00000115625 127 1.481 - - - - - 0.714 0.767 - - dual specificity tyrosine phosphorylation regulated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-080219-31]
38. cnga3a ENSDARG00000070726 8 1.476 - 0.738 - - - 0.738 - - - cyclic nucleotide gated channel alpha 3a [Source:ZFIN;Acc:ZDB-GENE-090611-2]
39. si:dkey-249p7.4 ENSDARG00000096663 9 1.472 0.772 - - - - - 0.700 - - si:dkey-249p7.4 [Source:ZFIN;Acc:ZDB-GENE-121214-270]
40. si:ch211-161h7.8 ENSDARG00000089919 60 1.469 - 0.738 - - - 0.731 - - - si:ch211-161h7.8 [Source:ZFIN;Acc:ZDB-GENE-091204-302]
41. cyb5d1 ENSDARG00000056007 67 1.457 0.738 - - - - - 0.719 - - cytochrome b5 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-173]
42. si:ch211-245n8.4 ENSDARG00000096222 230 1.449 - - - - - 0.717 0.732 - - si:ch211-245n8.4 [Source:ZFIN;Acc:ZDB-GENE-110914-56]
43. POLQ ENSDARG00000044622, ENSDARG00000110374 94 1.436 - 0.732 - - - 0.704 - - - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
44. si:dkey-9i23.6 ENSDARG00000094678 58 1.415 - - - - - 0.715 0.700 - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
45. ccdc103 ENSDARG00000053455 81 0.974 - 0.974 - - - - - - - coiled-coil domain containing 103 [Source:ZFIN;Acc:ZDB-GENE-040718-253]
46. map7d1a ENSDARG00000098802 118 0.961 - 0.961 - - - - - - - MAP7 domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-060503-22]
47. CU469544.1 CU469544.1 219 0.961 - - - - - - - 0.961 -
48. zgc:162160 ENSDARG00000060259 117 0.961 - 0.961 - - - - - - - zgc:162160 [Source:ZFIN;Acc:ZDB-GENE-070424-22]
49. ppfia2 ENSDARG00000013000 45 0.954 - 0.954 - - - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7905]
50. plaub ENSDARG00000039145 35 0.954 - 0.954 - - - - - - - plasminogen activator, urokinase b [Source:ZFIN;Acc:ZDB-GENE-030619-15]
51. cacng2a ENSDARG00000032565 99 0.953 - - - - - - - 0.953 - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
52. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 0.953 - - - - - - - 0.953 - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
53. KIF21B ENSDARG00000009733 53 0.953 - - - - - - - 0.953 - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
54. herc3 ENSDARG00000075887 41 0.952 0.952 - - - - - - - - HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:ZFIN;Acc:ZDB-GENE-090313-139]
55. echdc2 ENSDARG00000016607 719 0.952 - - - - - - - 0.952 - enoyl CoA hydratase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030219-147]
56. si:dkeyp-53d3.6 204 0.952 0.952 - - - - - - - - si:dkeyp-53d3.6, transcript variant X1
57. ba1 69 0.951 - - - - - - - 0.951 - ba1 globin
58. BX511006.2 BX511006.2 29 0.951 - - - - - - - 0.951 -
59. trmt5 ENSDARG00000069278 228 0.951 - - - - - - - 0.951 - TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5978]
60. GABRR1 ENSDARG00000043902 71 0.95 - - - - - - - 0.950 - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
61. bcl3 ENSDARG00000087832 69 0.95 - - - - - - - 0.950 - B cell CLL/lymphoma 3 [Source:ZFIN;Acc:ZDB-GENE-061013-1]
62. tmprss13b ENSDARG00000077573 47 0.949 - - - - - - - 0.949 - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
63. hoxa11a ENSDARG00000104162 283 0.949 - - - - - - - 0.949 - homeobox A11a [Source:ZFIN;Acc:ZDB-GENE-000823-8]
64. FHAD1 ENSDARG00000056723, ENSDARG00000116072 406 0.948 - - - - - - - 0.948 - forkhead-associated (FHA) phosphopeptide binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-041210-354]
65. srd5a2a ENSDARG00000043587 21 0.948 - - - - - - - 0.948 - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
66. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 0.946 - - - - - - - 0.946 - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
67. cdc14aa ENSDARG00000013858 18 0.946 - 0.946 - - - - - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
68. si:dkey-24g18.3 si:dkey-24g18.3 60 0.946 - 0.946 - - - - - - -
69. si:ch211-274p24.4 ENSDARG00000087088 36 0.946 - 0.946 - - - - - - - si:ch211-274p24.4 [Source:ZFIN;Acc:ZDB-GENE-091204-337]
70. si:ch211-190k17.13 si:ch211-190k17.13 48 0.946 - 0.946 - - - - - - -
71. C25H15orf27 C25H15orf27 69 0.946 - 0.946 - - - - - - -
72. ubr1 ENSDARG00000060480 71 0.945 - - - - - - - 0.945 - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
73. si:zfos-364h11.1 99 0.945 - - - - - - - 0.945 - si:zfos-364h11.1, transcript variant X4
74. si:dkey-152b24.6 ENSDARG00000105043 39 0.942 - - - - - - - 0.942 - si:dkey-152b24.6 [Source:ZFIN;Acc:ZDB-GENE-100922-31]
75. FAM84B ENSDARG00000032859, ENSDARG00000116831 127 0.942 - - - - - - - 0.942 - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
76. BX897726.3 BX897726.3 220 0.942 - - - - - - - 0.942 -
77. ZBTB8A ENSDARG00000059226 98 0.94 - - - - - - - 0.940 - zinc finger and BTB domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-060421-5153]
78. TMCO6 ENSDARG00000016336, ENSDARG00000111305 221 0.94 - - - - - - - 0.940 - transmembrane and coiled-coil domains 6 [Source:ZFIN;Acc:ZDB-GENE-070410-47]
79. CR848664.3 CR848664.3 183 0.94 - - - - - - - 0.940 -
80. slc5a3a ENSDARG00000010376 134 0.94 - - - - - - - 0.940 - solute carrier family 5 (sodium/myo-inositol cotransporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-090312-3]
81. mlh1 ENSDARG00000025948 130 0.938 - 0.938 - - - - - - - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
82. isg20l2 ENSDARG00000102266 167 0.938 - 0.938 - - - - - - - interferon stimulated exonuclease gene 20-like 2 [Source:ZFIN;Acc:ZDB-GENE-070928-8]
83. si:ch1073-174d20.2 ENSDARG00000079651 171 0.938 - - - - - - - 0.938 - si:ch1073-174d20.2 [Source:ZFIN;Acc:ZDB-GENE-121214-51]
84. wu:fb11h05 wu:fb11h05 126 0.938 - 0.938 - - - - - - -
85. tbx20 ENSDARG00000005150 335 0.938 - 0.938 - - - - - - - T-box 20 [Source:ZFIN;Acc:ZDB-GENE-000427-7]
86. CT573468.1 CT573468.1 283 0.937 - - - - - - - 0.937 -
87. nlgn1 ENSDARG00000077710 72 0.937 - - - - - - - 0.937 - neuroligin 1 [Source:ZFIN;Acc:ZDB-GENE-090918-1]
88. THEM6_1 ENSDARG00000103914 469 0.937 - - - - - - - 0.937 - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
89. CPNE8_1 CPNE8_1 140 0.933 - - - - - - - 0.933 -
90. pbx3a ENSDARG00000089262 97 0.932 - - - - - - - 0.932 - pre-B-cell leukemia homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-031218-1]
91. lrriq1 ENSDARG00000093781 83 0.932 - - - - - - - 0.932 - leucine-rich repeats and IQ motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-050419-235]
92. ASPH ENSDARG00000055945 214 0.93 - - - - - - - 0.930 - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
93. zdhhc14 ENSDARG00000037069 479 0.93 - - - - - - 0.930 - - zinc finger, DHHC-type containing 14 [Source:ZFIN;Acc:ZDB-GENE-040724-21]
94. CABZ01078431.1 CABZ01078431.1 183 0.929 - - - - - - - 0.929 -
95. mob3c ENSDARG00000043705 306 0.929 - - - - - - - 0.929 - MOB kinase activator 3C [Source:ZFIN;Acc:ZDB-GENE-040704-32]
96. myo5aa ENSDARG00000061635, ENSDARG00000116722 280 0.928 - - - - - - - 0.928 - myosin VAa [Source:ZFIN;Acc:ZDB-GENE-041027-2]
97. si:dkey-42p8.3 1117 0.927 - - - - - - - 0.927 - si:dkey-42p8.3, transcript variant X1
98. zgc:171459 ENSDARG00000077248 224 0.926 - - - - - - - 0.926 - zgc:171459 [Source:ZFIN;Acc:ZDB-GENE-030131-2059]
99. tmem180 tmem180 430 0.926 - - - - - - - 0.926 -
100. gpr137 ENSDARG00000037244 801 0.925 - - - - - - - 0.925 - G protein-coupled receptor 137 [Source:ZFIN;Acc:ZDB-GENE-040718-443]

There are 1216 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA