Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-198e13.3

Gene Name Gene ID Reads Annotation
si:ch211-198e13.3 5 si:ch211-198e13.3, transcript variant X1










Genes with expression patterns similar to si:ch211-198e13.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-198e13.3 5 4 - 1.000 - - 1.000 1.000 - - 1.000 si:ch211-198e13.3, transcript variant X1
2. ccdc24 ENSDARG00000038793 7 2 - - - - 1.000 - - - 1.000 coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
3. zgc:172323 ENSDARG00000053201 1 2 - - - - 1.000 - - - 1.000 zgc:172323 [Source:ZFIN;Acc:ZDB-GENE-080204-113]
4. slc5a5 ENSDARG00000005392 6 2 - - - - 1.000 - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
5. TMPRSS7 5 1.957 - - - - - 0.957 - - 1.000 transmembrane protease, serine 7
6. CR356223.1 ENSDARG00000093865 1 1.927 - - - - - 0.927 - - 1.000
7. HMGXB3 ENSDARG00000077823 2 1.927 - - - - - 0.927 - - 1.000 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
8. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1.878 - 0.878 - - 1.000 - - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
9. guk1b ENSDARG00000005776 23 1.854 - 0.854 - - 1.000 - - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
10. vtg3 ENSDARG00000016448 8 1.805 - 0.878 - - - 0.927 - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
11. foxi1 ENSDARG00000104566 176 1.805 - 0.878 - - - 0.927 - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
12. tprn ENSDARG00000101102 97 1.747 - 0.878 - - - 0.869 - - - taperin [Source:ZFIN;Acc:ZDB-GENE-081104-254]
13. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1.727 - 0.800 - - - 0.927 - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
14. bmb ENSDARG00000096603 120 1.685 - 0.880 - - - 0.805 - - - brambleberry [Source:ZFIN;Acc:ZDB-GENE-030131-5577]
15. fbxo15 ENSDARG00000016897 18 1.595 - 0.812 - - - 0.783 - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
16. rab11fip1a ENSDARG00000046124 69 1.56 - 0.738 - - - 0.822 - - - RAB11 family interacting protein 1 (class I) a [Source:ZFIN;Acc:ZDB-GENE-051113-116]
17. si:ch211-207c6.5 si:ch211-207c6.5 72 1.511 - 0.790 - - - 0.721 - - -
18. dcp2_1 ENSDARG00000104242 74 1 - - - - - - - - 1.000 decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
19. ZCCHC6 2 1 - - - - - - - - 1.000 zinc finger, CCHC domain containing 6
20. vent ENSDARG00000100483 74 1 - - - - - 1.000 - - - ventral expressed homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-2]
21. si:ch211-89o5.3 si:ch211-89o5.3 5 1 - - - - - - - - 1.000
22. si:dkey-111k7.3 si:dkey-111k7.3 0 1 - - - - 1.000 - - - -
23. gtf2f2b ENSDARG00000006816 1 1 - - - - 1.000 - - - - general transcription factor IIF, polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-050417-374]
24. CR556708.1 ENSDARG00000100565 6 1 - - - - 1.000 - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
25. tmem54 tmem54 3 1 - - - - 1.000 - - - -
26. BX511034.1_1 ENSDARG00000071629 0 1 - - - - - - - - 1.000
27. MFRP MFRP 6 1 - - - - 1.000 - - - -
28. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - - - - - - - - 1.000
29. si:dkey-4j21.1 17 1 - - - - - - - - 1.000 si:dkey-4j21.1, transcript variant X2
30. col5a2b ENSDARG00000024847 17 1 - - - - 1.000 - - - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
31. CR774179.1 ENSDARG00000086969 3 1 - - - - - - - - 1.000
32. BX842593.1 BX842593.1 0 1 - - - - 1.000 - - - -
33. MEI1 MEI1 2 1 - - - - - - - - 1.000
34. SSTR2 SSTR2 12 1 - - - - - - - - 1.000
35. CR356223.2_1 ENSDARG00000100655 1 1 - - - - 1.000 - - - -
36. slc35c1 ENSDARG00000104669 65 1 - - - - - - - - 1.000 solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
37. BX004873.4 BX004873.4 0 1 - - - - - - - - 1.000
38. cd247l ENSDARG00000077240 25 1 - - - - 1.000 - - - - CD247 antigen like [Source:ZFIN;Acc:ZDB-GENE-070508-2]
39. SH3TC1 ENSDARG00000077330 8 1 - - - - 1.000 - - - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
40. olfcg5 ENSDARG00000102459 5 1 - - - - 1.000 - - - - olfactory receptor C family, g5 [Source:ZFIN;Acc:ZDB-GENE-060503-913]
41. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1 - - - - 1.000 - - - -
42. zgc:92161 ENSDARG00000101749 27 1 - - - - - - - - 1.000 zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
43. si:dkey-252l8.1 si:dkey-252l8.1 2 1 - - - - 1.000 - - - -
44. AL929217.1 ENSDARG00000059891 1 1 - - - - 1.000 - - - - gamma-aminobutyric acid receptor subunit pi-like [Source:NCBI gene;Acc:562831]
45. Metazoa_SRP Metazoa_SRP 1 1 - - - - - - - - 1.000
46. CU929148.1 CU929148.1 0 1 - - - - 1.000 - - - -
47. BX546446.1 BX546446.1 0 1 - - - - 1.000 - - - -
48. zgc:172131 ENSDARG00000076269 32 1 - - - - 1.000 - - - - zgc:172131 [Source:ZFIN;Acc:ZDB-GENE-080204-47]
49. mlphb ENSDARG00000062481 14 1 - - - - 1.000 - - - - melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]
50. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - - - 1.000
51. GABRA2 ENSDARG00000113737 5 1 - - - - - - - - 1.000 gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
52. CABZ01058422.1 CABZ01058422.1 0 1 - - - - 1.000 - - - -
53. tecpr1a ENSDARG00000062515 7 1 - - - - - - - - 1.000 tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
54. ppid_1 ENSDARG00000038835 4 1 - - - - - - - - 1.000 peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
55. DNAJC11 1 1 - - - - - - - - 1.000 DnaJ heat shock protein family (Hsp40) member C11
56. htr5al htr5al 6 1 - - - - - - - - 1.000
57. agtr1a ENSDARG00000018616 1 1 - - - - - - - - 1.000 angiotensin II receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070912-546]
58. FAM46D FAM46D 0 1 - - - - - - - - 1.000
59. si:ch211-215l11.8 si:ch211-215l11.8 0 1 - - - - - - - - 1.000
60. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - - - - 1.000 si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
61. BX927130.1 ENSDARG00000099328 7 1 - - - - - - - - 1.000 si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
62. si:ch211-145m1.3 3 1 - - - - - - - - 1.000 si:ch211-145m1.3
63. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1 - - - - - - - - 1.000 si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
64. ssh1a ENSDARG00000056780 3 1 - - - - 1.000 - - - - slingshot protein phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-040724-201]
65. si:dkey-246j6.2 si:dkey-246j6.2 0 1 - - - - 1.000 - - - -
66. CU695216.1 CU695216.1 0 1 - - - - 1.000 - - - -
67. MYO1G ENSDARG00000036104 1 1 - - - - - - - - 1.000 myosin IG [Source:HGNC Symbol;Acc:HGNC:13880]
68. si:dkey-179k24.6 si:dkey-179k24.6 5 1 - - - - - - - - 1.000
69. arhgap21a ENSDARG00000104295 1 1 - - - - - - - - 1.000 Rho GTPase activating protein 21a [Source:ZFIN;Acc:ZDB-GENE-090918-5]
70. edn3b ENSDARG00000086669 8 1 - - - - 1.000 - - - - endothelin 3b [Source:ZFIN;Acc:ZDB-GENE-090313-235]
71. TAAR1 TAAR1 0 1 - - - - - - - - 1.000
72. zgc:109965 ENSDARG00000012126 11 1 - - - - 1.000 - - - - zgc:109965 [Source:ZFIN;Acc:ZDB-GENE-050913-21]
73. ptx4 ENSDARG00000038072 2 1 - - - - - - - - 1.000 pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
74. si:ch211-113a14.19_1 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 15 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
75. htr5a htr5a 4 1 - - - - 1.000 - - - -
76. si:ch211-196n4.2 si:ch211-196n4.2 0 1 - - - - - - - - 1.000
77. cyp2n13 ENSDARG00000042953 10 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
78. si:ch211-278p9.3 ENSDARG00000094098 0 1 - - - - - - - - 1.000 si:ch211-278p9.3 [Source:ZFIN;Acc:ZDB-GENE-081028-38]
79. nudt4b ENSDARG00000045878 10 1 - - - - 1.000 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 4b [Source:ZFIN;Acc:ZDB-GENE-040912-79]
80. scn1a 8 1 - - - - - - - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
81. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 - - - - - - - - 1.000 si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
82. SLCO2B1 ENSDARG00000054609 0 1 - - - - - - - - 1.000 solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
83. rhbdd3 ENSDARG00000079816 2 1 - - - - - - - - 1.000 rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
84. si:dkey-47k20.9 ENSDARG00000055920 0 1 - - - - 1.000 - - - - si:dkey-47k20.9 [Source:ZFIN;Acc:ZDB-GENE-060503-454]
85. si:ch211-214p13.7 1 1 - - - - - - - - 1.000 si:ch211-214p13.7
86. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - - - - - - - - 1.000
87. si:ch211-149k23.10 si:ch211-149k23.10 10 1 - - - - 1.000 - - - -
88. gabrr2b ENSDARG00000014057 9 1 - - - - 1.000 - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
89. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - - - - - - 1.000
90. si:ch73-94f11.5 si:ch73-94f11.5 6 1 - - - - 1.000 - - - -
91. taar20t ENSDARG00000095035 1 1 - - - - 1.000 - - - - trace amine associated receptor 20t [Source:ZFIN;Acc:ZDB-GENE-060414-18]
92. hp ENSDARG00000051890, ENSDARG00000095807 4 1 - - - - 1.000 - - - - haptoglobin [Source:ZFIN;Acc:ZDB-GENE-030131-1259]
93. GUCY2C ENSDARG00000014320, ENSDARG00000116238 8 1 - - - - 1.000 - - - - guanylate cyclase 2C [Source:ZFIN;Acc:ZDB-GENE-091118-67]
94. DSEL DSEL 1 1 - - - - - - - - 1.000
95. U6_10 U6_10 0 1 - - - - 1.000 - - - -
96. FAM185A ENSDARG00000019142 3 1 - - - - - - - - 1.000 family with sequence similarity 185, member A [Source:ZFIN;Acc:ZDB-GENE-131121-241]
97. CR381673.3 CR381673.3 4 1 - - - - 1.000 - - - -
98. wdr27 ENSDARG00000053386 2 1 - - - - - - - - 1.000 WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
99. FP103003.1_1 FP103003.1_1 6 1 - - - - - - - - 1.000
100. si:dkey-274m14.3 si:dkey-274m14.3 7 1 - - - - - - - - 1.000

There are 885 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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