Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-198e13.3

Gene Name Gene ID Reads Annotation
si:ch211-198e13.3 5 si:ch211-198e13.3, transcript variant X1










Genes with expression patterns similar to si:ch211-198e13.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-198e13.3 5 4 - 1.000 - - 1.000 1.000 - - 1.000 si:ch211-198e13.3, transcript variant X1
2. zgc:172323 ENSDARG00000053201 1 2 - - - - 1.000 - - - 1.000 zgc:172323 [Source:ZFIN;Acc:ZDB-GENE-080204-113]
3. slc5a5 ENSDARG00000005392 6 2 - - - - 1.000 - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
4. ccdc24 ENSDARG00000038793 7 2 - - - - 1.000 - - - 1.000 coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
5. TMPRSS7 5 1.957 - - - - - 0.957 - - 1.000 transmembrane protease, serine 7
6. HMGXB3 ENSDARG00000077823 2 1.927 - - - - - 0.927 - - 1.000 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
7. CR356223.1 ENSDARG00000093865 1 1.927 - - - - - 0.927 - - 1.000
8. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1.878 - 0.878 - - 1.000 - - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
9. guk1b ENSDARG00000005776 23 1.854 - 0.854 - - 1.000 - - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
10. vtg3 ENSDARG00000016448 8 1.805 - 0.878 - - - 0.927 - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
11. foxi1 ENSDARG00000104566 176 1.805 - 0.878 - - - 0.927 - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
12. tprn ENSDARG00000101102 97 1.747 - 0.878 - - - 0.869 - - - taperin [Source:ZFIN;Acc:ZDB-GENE-081104-254]
13. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1.727 - 0.800 - - - 0.927 - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
14. bmb ENSDARG00000096603 120 1.685 - 0.880 - - - 0.805 - - - brambleberry [Source:ZFIN;Acc:ZDB-GENE-030131-5577]
15. fbxo15 ENSDARG00000016897 18 1.595 - 0.812 - - - 0.783 - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
16. rab11fip1a ENSDARG00000046124 69 1.56 - 0.738 - - - 0.822 - - - RAB11 family interacting protein 1 (class I) a [Source:ZFIN;Acc:ZDB-GENE-051113-116]
17. si:ch211-207c6.5 si:ch211-207c6.5 72 1.511 - 0.790 - - - 0.721 - - -
18. bbs1 ENSDARG00000075169, ENSDARG00000114301 7 1 - - - - 1.000 - - - - Bardet-Biedl syndrome 1 [Source:ZFIN;Acc:ZDB-GENE-060126-1]
19. Mar-11 Mar-11 5 1 - - - - 1.000 - - - -
20. FP102016.2 FP102016.2 0 1 - - - - - - - - 1.000
21. AL929217.1 ENSDARG00000059891 1 1 - - - - 1.000 - - - - gamma-aminobutyric acid receptor subunit pi-like [Source:NCBI gene;Acc:562831]
22. CR356223.2_1 ENSDARG00000100655 1 1 - - - - 1.000 - - - -
23. CR774179.1 ENSDARG00000086969 3 1 - - - - - - - - 1.000
24. fgfr1b ENSDARG00000011190 10 1 - - - - 1.000 - - - - fibroblast growth factor receptor 1b [Source:ZFIN;Acc:ZDB-GENE-060503-14]
25. oacyl ENSDARG00000075191 351 1 - - - - 1.000 - - - - O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-090710-2]
26. vtg4 ENSDARG00000078429, ENSDARG00000116698 0 1 - - - - - - - - 1.000 vitellogenin 4 [Source:ZFIN;Acc:ZDB-GENE-001201-3]
27. GUCY2C ENSDARG00000014320, ENSDARG00000116238 8 1 - - - - 1.000 - - - - guanylate cyclase 2C [Source:ZFIN;Acc:ZDB-GENE-091118-67]
28. ccdc106 ccdc106 101 1 - 1.000 - - - - - - -
29. BX548067.4 BX548067.4 0 1 - - - - 1.000 - - - -
30. si:ch211-197g22.1 si:ch211-197g22.1 1 1 - - - - - - - - 1.000
31. si:dkey-47k20.9 ENSDARG00000055920 0 1 - - - - 1.000 - - - - si:dkey-47k20.9 [Source:ZFIN;Acc:ZDB-GENE-060503-454]
32. BX546446.1 BX546446.1 0 1 - - - - 1.000 - - - -
33. trim108 ENSDARG00000061762, ENSDARG00000114698 5 1 - - - - 1.000 - - - - tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
34. si:dkey-176f19.7 ENSDARG00000103348 10 1 - - - - - - - - 1.000 si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
35. cpdb ENSDARG00000053877 5 1 - - - - 1.000 - - - - carboxypeptidase D, b [Source:ZFIN;Acc:ZDB-GENE-060929-1270]
36. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - - - - - - - 1.000 solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
37. RBBP6_3 RBBP6_3 34 1 - - - - - - - - 1.000
38. zgc:173443 ENSDARG00000034403 26 1 - - - - 1.000 - - - - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
39. GPC6_1 GPC6_1 34 1 - - - - 1.000 - - - -
40. MMP25 MMP25 0 1 - - - - 1.000 - - - -
41. or131-2 ENSDARG00000073812 0 1 - - - - - - - - 1.000 odorant receptor, family H, subfamily 131, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-46]
42. CABZ01034707.1 CABZ01034707.1 122 1 - - - - - 1.000 - - -
43. BX546499.1 ENSDARG00000092602 1 1 - - - - - - - - 1.000
44. pth2 ENSDARG00000022951 7 1 - - - - 1.000 - - - - parathyroid hormone 2 [Source:ZFIN;Acc:ZDB-GENE-041102-1]
45. FP103003.1_1 FP103003.1_1 6 1 - - - - - - - - 1.000
46. FAM185A ENSDARG00000019142 3 1 - - - - - - - - 1.000 family with sequence similarity 185, member A [Source:ZFIN;Acc:ZDB-GENE-131121-241]
47. htr5al htr5al 6 1 - - - - - - - - 1.000
48. FAM46D FAM46D 0 1 - - - - - - - - 1.000
49. PLA2G4C_1 PLA2G4C_1 2 1 - - - - - - - - 1.000
50. si:ch211-215m21.29 si:ch211-215m21.29 5 1 - - - - - - - - 1.000
51. si:dkey-4j21.1 17 1 - - - - - - - - 1.000 si:dkey-4j21.1, transcript variant X2
52. org ENSDARG00000076474 16 1 - - - - - - - - 1.000 oogenesis-related gene [Source:ZFIN;Acc:ZDB-GENE-050208-584]
53. ENSDARG00000037617 ENSDARG00000037617 1 1 - - - - 1.000 - - - -
54. ldlrap1b ENSDARG00000039750 2 1 - - - - - - - - 1.000 low density lipoprotein receptor adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1012]
55. si:ch211-86k6.3 si:ch211-86k6.3 1 1 - - - - 1.000 - - - -
56. si:ch211-196n4.2 si:ch211-196n4.2 0 1 - - - - - - - - 1.000
57. slc15a1b ENSDARG00000044528 6 1 - - - - - - - - 1.000 solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
58. si:dkey-220o10.3 si:dkey-220o10.3 0 1 - - - - - - - - 1.000
59. guca1g ENSDARG00000045737, ENSDARG00000114717 22 1 - - - - 1.000 - - - - guanylate cyclase activator 1g [Source:ZFIN;Acc:ZDB-GENE-050120-1]
60. slc9a3.2 ENSDARG00000036722 31 1 - - - - 1.000 - - - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-640]
61. CYP27A1_2 CYP27A1_2 5 1 - - - - - - - - 1.000
62. si:dkey-274m14.3 si:dkey-274m14.3 7 1 - - - - - - - - 1.000
63. SNORD15 SNORD15 0 1 - - - - 1.000 - - - -
64. U6_10 U6_10 0 1 - - - - 1.000 - - - -
65. ddr2b ENSDARG00000058695 7 1 - - - - 1.000 - - - - discoidin domain receptor tyrosine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060503-361]
66. C17H8orf74 C17H8orf74 4 1 - - - - - - - - 1.000
67. si:ch211-113a14.14 si:ch211-113a14.14 3 1 - - - - 1.000 - - - -
68. 5S_rRNA_13 5S_rRNA_13 0 1 - - - - - - - - 1.000
69. wdr27 ENSDARG00000053386 2 1 - - - - - - - - 1.000 WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
70. fubp3 ENSDARG00000086896 21 1 - - - - 1.000 - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
71. EPM2AIP1 EPM2AIP1 4 1 - - - - - - - - 1.000
72. si:ch1073-109g21.1 si:ch1073-109g21.1 0 1 - - - - - - - - 1.000
73. si:ch211-171h4.5 ENSDARG00000077337 3 1 - - - - 1.000 - - - - si:ch211-171h4.5 [Source:ZFIN;Acc:ZDB-GENE-081104-151]
74. tecpr1a ENSDARG00000062515 7 1 - - - - - - - - 1.000 tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
75. trim35-21 ENSDARG00000102303 7 1 - - - - 1.000 - - - - tripartite motif containing 35-21 [Source:ZFIN;Acc:ZDB-GENE-060503-673]
76. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
77. CU929148.1 CU929148.1 0 1 - - - - 1.000 - - - -
78. si:dkey-246j6.2 si:dkey-246j6.2 0 1 - - - - 1.000 - - - -
79. utrnp 0 1 - - - - 1.000 - - - - utrophin, pseudogene
80. rdh14a ENSDARG00000039299 79 1 - - - - - 1.000 - - - retinol dehydrogenase 14a [Source:ZFIN;Acc:ZDB-GENE-041010-124]
81. igsf21b ENSDARG00000056084 6 1 - - - - 1.000 - - - - immunoglobin superfamily, member 21b [Source:ZFIN;Acc:ZDB-GENE-070424-59]
82. agtr1a ENSDARG00000018616 1 1 - - - - - - - - 1.000 angiotensin II receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070912-546]
83. scn1a 8 1 - - - - - - - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
84. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - - - 1.000
85. KIAA0319 KIAA0319 2 1 - - - - - - - - 1.000
86. SYNPO 2 1 - - - - - - - - 1.000 synaptopodin, transcript variant X2
87. GABRA2 ENSDARG00000113737 5 1 - - - - - - - - 1.000 gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
88. CABZ01030889.1 CABZ01030889.1 4 1 - - - - 1.000 - - - -
89. CR352258.1 CR352258.1 3 1 - - - - 1.000 - - - -
90. clec3ba ENSDARG00000076541 3 1 - - - - - - - - 1.000 C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
91. SEMA4F ENSDARG00000100308 1 1 - - - - - - - - 1.000 ssemaphorin 4F [Source:HGNC Symbol;Acc:HGNC:10734]
92. si:ch211-12e13.12 ENSDARG00000094737 1 1 - - - - - - - - 1.000 si:ch211-12e13.12 [Source:ZFIN;Acc:ZDB-GENE-070424-121]
93. si:dkeyp-98a7.5 0 1 - - - - 1.000 - - - - si:dkeyp-98a7.5
94. Vault_1 Vault_1 6 1 - - - - 1.000 - - - -
95. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - 1.000 - - - -
96. CMA1_6 CMA1_6 2 1 - - - - 1.000 - - - -
97. sele ENSDARG00000009123 122 1 - - - - 1.000 - - - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
98. ttc6 ENSDARG00000104125 7 1 - - - - - - - - 1.000 tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
99. si:dkey-199k11.5 si:dkey-199k11.5 4 1 - - - - - - - - 1.000
100. ARAP1 3 1 - - - - - - - - 1.000 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1

There are 885 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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