Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-198e13.3

Gene Name Gene ID Reads Annotation
si:ch211-198e13.3 5 si:ch211-198e13.3, transcript variant X1










Genes with expression patterns similar to si:ch211-198e13.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-198e13.3 5 4 - 1.000 - - 1.000 1.000 - - 1.000 si:ch211-198e13.3, transcript variant X1
2. ccdc24 ENSDARG00000038793 7 2 - - - - 1.000 - - - 1.000 coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
3. slc5a5 ENSDARG00000005392 6 2 - - - - 1.000 - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
4. zgc:172323 ENSDARG00000053201 1 2 - - - - 1.000 - - - 1.000 zgc:172323 [Source:ZFIN;Acc:ZDB-GENE-080204-113]
5. TMPRSS7 5 1.957 - - - - - 0.957 - - 1.000 transmembrane protease, serine 7
6. CR356223.1 ENSDARG00000093865 1 1.927 - - - - - 0.927 - - 1.000
7. HMGXB3 ENSDARG00000077823 2 1.927 - - - - - 0.927 - - 1.000 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
8. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1.878 - 0.878 - - 1.000 - - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
9. guk1b ENSDARG00000005776 23 1.854 - 0.854 - - 1.000 - - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
10. foxi1 ENSDARG00000104566 176 1.805 - 0.878 - - - 0.927 - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
11. vtg3 ENSDARG00000016448 8 1.805 - 0.878 - - - 0.927 - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
12. tprn ENSDARG00000101102 97 1.747 - 0.878 - - - 0.869 - - - taperin [Source:ZFIN;Acc:ZDB-GENE-081104-254]
13. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1.727 - 0.800 - - - 0.927 - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
14. bmb ENSDARG00000096603 120 1.685 - 0.880 - - - 0.805 - - - brambleberry [Source:ZFIN;Acc:ZDB-GENE-030131-5577]
15. fbxo15 ENSDARG00000016897 18 1.595 - 0.812 - - - 0.783 - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
16. rab11fip1a ENSDARG00000046124 69 1.56 - 0.738 - - - 0.822 - - - RAB11 family interacting protein 1 (class I) a [Source:ZFIN;Acc:ZDB-GENE-051113-116]
17. si:ch211-207c6.5 si:ch211-207c6.5 72 1.511 - 0.790 - - - 0.721 - - -
18. si:ch211-254p10.2 ENSDARG00000056750 3 1 - - - - - - - - 1.000 si:ch211-254p10.2 [Source:ZFIN;Acc:ZDB-GENE-100922-17]
19. trpm3 ENSDARG00000039181 2 1 - - - - 1.000 - - - - transient receptor potential cation channel, subfamily M, member 3 [Source:ZFIN;Acc:ZDB-GENE-060531-95]
20. si:ch73-17k20.1 si:ch73-17k20.1 2 1 - - - - 1.000 - - - -
21. si:dkeyp-73d8.12 si:dkeyp-73d8.12 0 1 - - - - 1.000 - - - -
22. si:ch73-94f11.5 si:ch73-94f11.5 6 1 - - - - 1.000 - - - -
23. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - - - - 1.000 si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
24. CR318624.1 ENSDARG00000094618 5 1 - - - - - - - - 1.000
25. slc15a1b ENSDARG00000044528 6 1 - - - - - - - - 1.000 solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
26. si:dkey-149m13.2 si:dkey-149m13.2 1 1 - - - - - - - - 1.000
27. sele ENSDARG00000009123 122 1 - - - - 1.000 - - - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
28. nudt4b ENSDARG00000045878 10 1 - - - - 1.000 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 4b [Source:ZFIN;Acc:ZDB-GENE-040912-79]
29. si:dkey-179k24.6 si:dkey-179k24.6 5 1 - - - - - - - - 1.000
30. scn1a 8 1 - - - - - - - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
31. ftr55 ENSDARG00000009161 3 1 - - - - 1.000 - - - - finTRIM family, member 55 [Source:ZFIN;Acc:ZDB-GENE-070424-161]
32. CU302316.1 ENSDARG00000109600 2 1 - - - - - - - - 1.000
33. ssh1a ENSDARG00000056780 3 1 - - - - 1.000 - - - - slingshot protein phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-040724-201]
34. CABZ01030692.1 CABZ01030692.1 0 1 - - - - - - - - 1.000
35. trim35-21 ENSDARG00000102303 7 1 - - - - 1.000 - - - - tripartite motif containing 35-21 [Source:ZFIN;Acc:ZDB-GENE-060503-673]
36. cyp2n13 ENSDARG00000042953 10 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
37. rdh14a ENSDARG00000039299 79 1 - - - - - 1.000 - - - retinol dehydrogenase 14a [Source:ZFIN;Acc:ZDB-GENE-041010-124]
38. CT737184.1 ENSDARG00000102726 0 1 - - - - - - - - 1.000
39. si:dkey-252l8.1 si:dkey-252l8.1 2 1 - - - - 1.000 - - - -
40. CABZ01074669.1 CABZ01074669.1 12 1 - - - - - - - - 1.000
41. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - - - - - - 1.000
42. BX546446.1 BX546446.1 0 1 - - - - 1.000 - - - -
43. BX119910.4 BX119910.4 0 1 - - - - - - - - 1.000
44. SLCO2B1 ENSDARG00000054609 0 1 - - - - - - - - 1.000 solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
45. zgc:92161 ENSDARG00000101749 27 1 - - - - - - - - 1.000 zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
46. FP102016.2 FP102016.2 0 1 - - - - - - - - 1.000
47. MEI1 MEI1 2 1 - - - - - - - - 1.000
48. CSF3 CSF3 4 1 - - - - 1.000 - - - -
49. KIAA0319 KIAA0319 2 1 - - - - - - - - 1.000
50. htr5al htr5al 6 1 - - - - - - - - 1.000
51. si:ch211-120f16.3 si:ch211-120f16.3 0 1 - - - - 1.000 - - - -
52. si:ch1073-109g21.1 si:ch1073-109g21.1 0 1 - - - - - - - - 1.000
53. CU633740.1 CU633740.1 8 1 - - - - 1.000 - - - -
54. si:dkey-286j17.3 si:dkey-286j17.3 8 1 - - - - 1.000 - - - -
55. mlphb ENSDARG00000062481 14 1 - - - - 1.000 - - - - melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]
56. BX927130.1 ENSDARG00000099328 7 1 - - - - - - - - 1.000 si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
57. cdc14aa ENSDARG00000013858 18 1 - - - - - - - - 1.000 cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
58. CDK18 ENSDARG00000012204 5 1 - - - - - - - - 1.000 cyclin dependent kinase 18 [Source:HGNC Symbol;Acc:HGNC:8751]
59. agtr1a ENSDARG00000018616 1 1 - - - - - - - - 1.000 angiotensin II receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070912-546]
60. zgc:172131 ENSDARG00000076269 32 1 - - - - 1.000 - - - - zgc:172131 [Source:ZFIN;Acc:ZDB-GENE-080204-47]
61. CR356223.2_1 ENSDARG00000100655 1 1 - - - - 1.000 - - - -
62. si:dkey-4j21.1 17 1 - - - - - - - - 1.000 si:dkey-4j21.1, transcript variant X2
63. ENSDARG00000088389 ENSDARG00000088389 2 1 - - - - 1.000 - - - -
64. clec3ba ENSDARG00000076541 3 1 - - - - - - - - 1.000 C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
65. si:ch73-341k19.1 ENSDARG00000095946 5 1 - - - - - - - - 1.000 si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
66. slc47a2 2 1 - - - - - - - - 1.000 solute carrier family 47 (multidrug and toxin extrusion), member 2
67. si:dkey-172k15.6 ENSDARG00000095717 0 1 - - - - 1.000 - - - - si:dkey-172k15.6 [Source:ZFIN;Acc:ZDB-GENE-121214-9]
68. CT027754.1 CT027754.1 0 1 - - - - 1.000 - - - -
69. mybpc2a ENSDARG00000030157 11 1 - - - - - - - - 1.000 myosin binding protein C, fast type a [Source:ZFIN;Acc:ZDB-GENE-060901-1]
70. NPM2 NPM2 41 1 - - - - - - - - 1.000
71. PDE6H 3 1 - - - - - - - - 1.000 phosphodiesterase 6H, cGMP-specific, cone, gamma, transcript variant 2
72. si:dkey-274m14.3 si:dkey-274m14.3 7 1 - - - - - - - - 1.000
73. si:dkey-188i13.8 ENSDARG00000092725 1 1 - - - - - - - - 1.000 si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
74. CDR2_1 CDR2_1 8 1 - - - - - - - - 1.000
75. ttc6 ENSDARG00000104125 7 1 - - - - - - - - 1.000 tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
76. rbm22 ENSDARG00000010238 523 1 - - - - 1.000 - - - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
77. ptger2a ENSDARG00000011434 6 1 - - - - - - - - 1.000 prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
78. MMP25 MMP25 0 1 - - - - 1.000 - - - -
79. FP103003.1_1 FP103003.1_1 6 1 - - - - - - - - 1.000
80. vcam1a ENSDARG00000078201 1 1 - - - - - - - - 1.000 vascular cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-060503-172]
81. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - - - - - - - 1.000 solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
82. zgc:162724 zgc:162724 9 1 - - - - - - - - 1.000
83. taar20t ENSDARG00000095035 1 1 - - - - 1.000 - - - - trace amine associated receptor 20t [Source:ZFIN;Acc:ZDB-GENE-060414-18]
84. C17H8orf74 C17H8orf74 4 1 - - - - - - - - 1.000
85. CT030048.2 CT030048.2 3 1 - - - - - - - - 1.000
86. si:ch211-214p13.7 1 1 - - - - - - - - 1.000 si:ch211-214p13.7
87. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - - - 1.000
88. CR352258.1 CR352258.1 3 1 - - - - 1.000 - - - -
89. LIX1 ENSDARG00000052154 9 1 - - - - - - - - 1.000 limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
90. si:ch73-27e22.2 ENSDARG00000092266 8 1 - - - - 1.000 - - - - si:ch73-27e22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-230]
91. CNBD1 ENSDARG00000091489 0 1 - - - - - - - - 1.000 cyclic nucleotide binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-1022]
92. CR381673.3 CR381673.3 4 1 - - - - 1.000 - - - -
93. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - - - - - - 1.000 potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
94. si:ch211-215m21.29 si:ch211-215m21.29 5 1 - - - - - - - - 1.000
95. rhbdd3 ENSDARG00000079816 2 1 - - - - - - - - 1.000 rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
96. 5S_rRNA_13 5S_rRNA_13 0 1 - - - - - - - - 1.000
97. GPC6_1 GPC6_1 34 1 - - - - 1.000 - - - -
98. si:dkey-111k7.3 si:dkey-111k7.3 0 1 - - - - 1.000 - - - -
99. SH3TC1 ENSDARG00000077330 8 1 - - - - 1.000 - - - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
100. fgfr1b ENSDARG00000011190 10 1 - - - - 1.000 - - - - fibroblast growth factor receptor 1b [Source:ZFIN;Acc:ZDB-GENE-060503-14]

There are 885 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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