Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-198e13.3

Gene Name Gene ID Reads Annotation
si:ch211-198e13.3 5 si:ch211-198e13.3, transcript variant X1










Genes with expression patterns similar to si:ch211-198e13.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-198e13.3 5 4 - 1.000 - - 1.000 1.000 - - 1.000 si:ch211-198e13.3, transcript variant X1
2. zgc:172323 ENSDARG00000053201 1 2 - - - - 1.000 - - - 1.000 zgc:172323 [Source:ZFIN;Acc:ZDB-GENE-080204-113]
3. slc5a5 ENSDARG00000005392 6 2 - - - - 1.000 - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
4. ccdc24 ENSDARG00000038793 7 2 - - - - 1.000 - - - 1.000 coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
5. TMPRSS7 5 1.957 - - - - - 0.957 - - 1.000 transmembrane protease, serine 7
6. CR356223.1 ENSDARG00000093865 1 1.927 - - - - - 0.927 - - 1.000
7. HMGXB3 ENSDARG00000077823 2 1.927 - - - - - 0.927 - - 1.000 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
8. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1.878 - 0.878 - - 1.000 - - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
9. guk1b ENSDARG00000005776 23 1.854 - 0.854 - - 1.000 - - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
10. foxi1 ENSDARG00000104566 176 1.805 - 0.878 - - - 0.927 - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
11. vtg3 ENSDARG00000016448 8 1.805 - 0.878 - - - 0.927 - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
12. tprn ENSDARG00000101102 97 1.747 - 0.878 - - - 0.869 - - - taperin [Source:ZFIN;Acc:ZDB-GENE-081104-254]
13. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1.727 - 0.800 - - - 0.927 - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
14. bmb ENSDARG00000096603 120 1.685 - 0.880 - - - 0.805 - - - brambleberry [Source:ZFIN;Acc:ZDB-GENE-030131-5577]
15. fbxo15 ENSDARG00000016897 18 1.595 - 0.812 - - - 0.783 - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
16. rab11fip1a ENSDARG00000046124 69 1.56 - 0.738 - - - 0.822 - - - RAB11 family interacting protein 1 (class I) a [Source:ZFIN;Acc:ZDB-GENE-051113-116]
17. si:ch211-207c6.5 si:ch211-207c6.5 72 1.511 - 0.790 - - - 0.721 - - -
18. cdc14aa ENSDARG00000013858 18 1 - - - - - - - - 1.000 cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
19. ENSDARG00000088389 ENSDARG00000088389 2 1 - - - - 1.000 - - - -
20. cyp2n13 ENSDARG00000042953 10 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
21. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1 - - - - 1.000 - - - -
22. LIX1 ENSDARG00000052154 9 1 - - - - - - - - 1.000 limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
23. btr27 btr27 0 1 - - - - 1.000 - - - -
24. lifra ENSDARG00000098857 11 1 - - - - - - - - 1.000 leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
25. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - - - - - - 1.000 potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
26. ZCCHC6 2 1 - - - - - - - - 1.000 zinc finger, CCHC domain containing 6
27. BX511034.1_1 ENSDARG00000071629 0 1 - - - - - - - - 1.000
28. dcp2_1 ENSDARG00000104242 74 1 - - - - - - - - 1.000 decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
29. si:ch211-233m11.1 ENSDARG00000074653 1 1 - - - - - - - - 1.000 si:ch211-233m11.1 [Source:ZFIN;Acc:ZDB-GENE-081028-16]
30. cyp2p9 ENSDARG00000022631 1 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily P, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-040120-2]
31. CR556708.1 ENSDARG00000100565 6 1 - - - - 1.000 - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
32. CU467982.1 CU467982.1 12 1 - - - - - - - - 1.000
33. si:dkey-98f17.5 ENSDARG00000068863, ENSDARG00000116489 7 1 - - - - - - - - 1.000 si:dkey-98f17.5 [Source:ZFIN;Acc:ZDB-GENE-060526-354]
34. gtf2f2b ENSDARG00000006816 1 1 - - - - 1.000 - - - - general transcription factor IIF, polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-050417-374]
35. si:ch73-17k20.1 si:ch73-17k20.1 2 1 - - - - 1.000 - - - -
36. CNBD1 ENSDARG00000091489 0 1 - - - - - - - - 1.000 cyclic nucleotide binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-1022]
37. si:dkey-25o1.6 si:dkey-25o1.6 5 1 - - - - - - - - 1.000
38. si:dkey-222f2.6 si:dkey-222f2.6 1 1 - - - - 1.000 - - - -
39. SH3TC1 ENSDARG00000077330 8 1 - - - - 1.000 - - - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
40. si:dkey-179k24.6 si:dkey-179k24.6 5 1 - - - - - - - - 1.000
41. si:dkey-149m13.2 si:dkey-149m13.2 1 1 - - - - - - - - 1.000
42. si:ch73-27e22.2 ENSDARG00000092266 8 1 - - - - 1.000 - - - - si:ch73-27e22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-230]
43. ctssa ctssa 24 1 - - - - 1.000 - - - -
44. pcdh2g16 1 1 - - - - 1.000 - - - - protocadherin 2 gamma 16
45. DNAJC11 1 1 - - - - - - - - 1.000 DnaJ heat shock protein family (Hsp40) member C11
46. si:ch73-341k19.1 ENSDARG00000095946 5 1 - - - - - - - - 1.000 si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
47. si:ch211-145m1.3 3 1 - - - - - - - - 1.000 si:ch211-145m1.3
48. col5a2b ENSDARG00000024847 17 1 - - - - 1.000 - - - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
49. si:dkey-21n8.3 si:dkey-21n8.3 5 1 - - - - - 1.000 - - -
50. glis1b ENSDARG00000027933 14 1 - - - - 1.000 - - - - GLIS family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-081105-172]
51. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - - - - - - - - 1.000
52. mlphb ENSDARG00000062481 14 1 - - - - 1.000 - - - - melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]
53. dpyda dpyda 12 1 - - - - 1.000 - - - -
54. BX842593.1 BX842593.1 0 1 - - - - 1.000 - - - -
55. si:dkey-231k6.6 si:dkey-231k6.6 2 1 - - - - 1.000 - - - -
56. sagb ENSDARG00000038378 28 1 - - - - 1.000 - - - - S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
57. BX119910.4 BX119910.4 0 1 - - - - - - - - 1.000
58. taar20t ENSDARG00000095035 1 1 - - - - 1.000 - - - - trace amine associated receptor 20t [Source:ZFIN;Acc:ZDB-GENE-060414-18]
59. zgc:92590 ENSDARG00000040282 13 1 - - - - 1.000 - - - - zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
60. htr5a htr5a 4 1 - - - - 1.000 - - - -
61. si:ch211-113a14.19_1 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 15 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
62. tmem54 tmem54 3 1 - - - - 1.000 - - - -
63. si:dkey-82i20.3 si:dkey-82i20.3 6 1 - - - - - - - - 1.000
64. hhat ENSDARG00000074428 8 1 - - - - - - - - 1.000 hedgehog acyltransferase [Source:ZFIN;Acc:ZDB-GENE-051118-1]
65. zgc:92161 ENSDARG00000101749 27 1 - - - - - - - - 1.000 zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
66. CU695216.1 CU695216.1 0 1 - - - - 1.000 - - - -
67. CR381673.3 CR381673.3 4 1 - - - - 1.000 - - - -
68. CR749167.1 ENSDARG00000100165 38 1 - - - - 1.000 - - - -
69. skila ENSDARG00000023933 2 1 - - - - - - - - 1.000 SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
70. si:ch211-202h22.9 ENSDARG00000079980 2 1 - - - - 1.000 - - - - si:ch211-202h22.9 [Source:ZFIN;Acc:ZDB-GENE-030131-1143]
71. si:dkeyp-51f11.3 si:dkeyp-51f11.3 0 1 - - - - - - - - 1.000
72. CABZ01112732.1 ENSDARG00000068453 4 1 - - - - - - - - 1.000 tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
73. si:dkey-206f10.5 si:dkey-206f10.5 1 1 - - - - 1.000 - - - -
74. PDE6H 3 1 - - - - - - - - 1.000 phosphodiesterase 6H, cGMP-specific, cone, gamma, transcript variant 2
75. rhbdd3 ENSDARG00000079816 2 1 - - - - - - - - 1.000 rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
76. trpm3 ENSDARG00000039181 2 1 - - - - 1.000 - - - - transient receptor potential cation channel, subfamily M, member 3 [Source:ZFIN;Acc:ZDB-GENE-060531-95]
77. slc47a2 2 1 - - - - - - - - 1.000 solute carrier family 47 (multidrug and toxin extrusion), member 2
78. CDR2_1 CDR2_1 8 1 - - - - - - - - 1.000
79. cd247l ENSDARG00000077240 25 1 - - - - 1.000 - - - - CD247 antigen like [Source:ZFIN;Acc:ZDB-GENE-070508-2]
80. arhgap21a ENSDARG00000104295 1 1 - - - - - - - - 1.000 Rho GTPase activating protein 21a [Source:ZFIN;Acc:ZDB-GENE-090918-5]
81. CDK18 ENSDARG00000012204 5 1 - - - - - - - - 1.000 cyclin dependent kinase 18 [Source:HGNC Symbol;Acc:HGNC:8751]
82. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - - - - 1.000 si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
83. CABZ01030692.1 CABZ01030692.1 0 1 - - - - - - - - 1.000
84. fancl ENSDARG00000007885 0 1 - - - - 1.000 - - - - FA complementation group L [Source:ZFIN;Acc:ZDB-GENE-040426-1045]
85. TRIM8 TRIM8 5 1 - - - - 1.000 - - - -
86. nudt4b ENSDARG00000045878 10 1 - - - - 1.000 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 4b [Source:ZFIN;Acc:ZDB-GENE-040912-79]
87. si:dkey-34f9.2 si:dkey-34f9.2 0 1 - - - - - - - - 1.000
88. si:dkey-111k7.3 si:dkey-111k7.3 0 1 - - - - 1.000 - - - -
89. si:ch211-215l11.8 si:ch211-215l11.8 0 1 - - - - - - - - 1.000
90. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - 1.000 - - - -
91. CR388160.3 CR388160.3 0 1 - - - - 1.000 - - - -
92. Vault_1 Vault_1 6 1 - - - - 1.000 - - - -
93. GLRA2 ENSDARG00000075012, ENSDARG00000114839 0 1 - - - - - - - - 1.000 glycine receptor, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-090407-1]
94. Telomerase-vert Telomerase-vert 8 1 - - - - 1.000 - - - -
95. CMA1_6 CMA1_6 2 1 - - - - 1.000 - - - -
96. ftr55 ENSDARG00000009161 3 1 - - - - 1.000 - - - - finTRIM family, member 55 [Source:ZFIN;Acc:ZDB-GENE-070424-161]
97. slc35c1 ENSDARG00000104669 65 1 - - - - - - - - 1.000 solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
98. ttc6 ENSDARG00000104125 7 1 - - - - - - - - 1.000 tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
99. sele ENSDARG00000009123 122 1 - - - - 1.000 - - - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
100. SOX8 SOX8 22 1 - - - - 1.000 - - - -

There are 885 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA