Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-198e13.3

Gene Name Gene ID Reads Annotation
si:ch211-198e13.3 5 si:ch211-198e13.3, transcript variant X1










Genes with expression patterns similar to si:ch211-198e13.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-198e13.3 5 4 - 1.000 - - 1.000 1.000 - - 1.000 si:ch211-198e13.3, transcript variant X1
2. slc5a5 ENSDARG00000005392 6 2 - - - - 1.000 - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
3. ccdc24 ENSDARG00000038793 7 2 - - - - 1.000 - - - 1.000 coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
4. zgc:172323 ENSDARG00000053201 1 2 - - - - 1.000 - - - 1.000 zgc:172323 [Source:ZFIN;Acc:ZDB-GENE-080204-113]
5. TMPRSS7 5 1.957 - - - - - 0.957 - - 1.000 transmembrane protease, serine 7
6. CR356223.1 ENSDARG00000093865 1 1.927 - - - - - 0.927 - - 1.000
7. HMGXB3 ENSDARG00000077823 2 1.927 - - - - - 0.927 - - 1.000 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
8. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1.878 - 0.878 - - 1.000 - - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
9. guk1b ENSDARG00000005776 23 1.854 - 0.854 - - 1.000 - - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
10. foxi1 ENSDARG00000104566 176 1.805 - 0.878 - - - 0.927 - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
11. vtg3 ENSDARG00000016448 8 1.805 - 0.878 - - - 0.927 - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
12. tprn ENSDARG00000101102 97 1.747 - 0.878 - - - 0.869 - - - taperin [Source:ZFIN;Acc:ZDB-GENE-081104-254]
13. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1.727 - 0.800 - - - 0.927 - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
14. bmb ENSDARG00000096603 120 1.685 - 0.880 - - - 0.805 - - - brambleberry [Source:ZFIN;Acc:ZDB-GENE-030131-5577]
15. fbxo15 ENSDARG00000016897 18 1.595 - 0.812 - - - 0.783 - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
16. rab11fip1a ENSDARG00000046124 69 1.56 - 0.738 - - - 0.822 - - - RAB11 family interacting protein 1 (class I) a [Source:ZFIN;Acc:ZDB-GENE-051113-116]
17. si:ch211-207c6.5 si:ch211-207c6.5 72 1.511 - 0.790 - - - 0.721 - - -
18. si:dkey-4j21.1 17 1 - - - - - - - - 1.000 si:dkey-4j21.1, transcript variant X2
19. GPC6_1 GPC6_1 34 1 - - - - 1.000 - - - -
20. si:ch211-215m21.29 si:ch211-215m21.29 5 1 - - - - - - - - 1.000
21. si:dkey-199k11.5 si:dkey-199k11.5 4 1 - - - - - - - - 1.000
22. CU302316.1 ENSDARG00000109600 2 1 - - - - - - - - 1.000
23. SOX8 SOX8 22 1 - - - - 1.000 - - - -
24. si:ch211-86k6.3 si:ch211-86k6.3 1 1 - - - - 1.000 - - - -
25. CT027754.1 CT027754.1 0 1 - - - - 1.000 - - - -
26. FP102016.2 FP102016.2 0 1 - - - - - - - - 1.000
27. zgc:109965 ENSDARG00000012126 11 1 - - - - 1.000 - - - - zgc:109965 [Source:ZFIN;Acc:ZDB-GENE-050913-21]
28. ZCCHC6 2 1 - - - - - - - - 1.000 zinc finger, CCHC domain containing 6
29. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - - - - - - 1.000
30. si:ch211-149k23.4 si:ch211-149k23.4 0 1 - - - - 1.000 - - - -
31. si:dkey-206f10.5 si:dkey-206f10.5 1 1 - - - - 1.000 - - - -
32. zgc:92590 ENSDARG00000040282 13 1 - - - - 1.000 - - - - zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
33. btr27 btr27 0 1 - - - - 1.000 - - - -
34. cpdb ENSDARG00000053877 5 1 - - - - 1.000 - - - - carboxypeptidase D, b [Source:ZFIN;Acc:ZDB-GENE-060929-1270]
35. BX548067.4 BX548067.4 0 1 - - - - 1.000 - - - -
36. si:ch211-149k23.10 si:ch211-149k23.10 10 1 - - - - 1.000 - - - -
37. ccr6a ENSDARG00000087474 10 1 - - - - 1.000 - - - - chemokine (C-C motif) receptor 6a [Source:ZFIN;Acc:ZDB-GENE-040625-126]
38. glis1b ENSDARG00000027933 14 1 - - - - 1.000 - - - - GLIS family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-081105-172]
39. skila ENSDARG00000023933 2 1 - - - - - - - - 1.000 SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
40. lifra ENSDARG00000098857 11 1 - - - - - - - - 1.000 leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
41. si:zfos-979f1.2 ENSDARG00000011652 24 1 - - - - - - - - 1.000 si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
42. CU929148.1 CU929148.1 0 1 - - - - 1.000 - - - -
43. CR556708.1 ENSDARG00000100565 6 1 - - - - 1.000 - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
44. si:ch211-89o5.3 si:ch211-89o5.3 5 1 - - - - - - - - 1.000
45. pth2 ENSDARG00000022951 7 1 - - - - 1.000 - - - - parathyroid hormone 2 [Source:ZFIN;Acc:ZDB-GENE-041102-1]
46. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - - - - - - - - 1.000
47. NPM2 NPM2 41 1 - - - - - - - - 1.000
48. si:dkey-274m14.3 si:dkey-274m14.3 7 1 - - - - - - - - 1.000
49. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - - - - 1.000 si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
50. SYNPO 2 1 - - - - - - - - 1.000 synaptopodin, transcript variant X2
51. CT030048.2 CT030048.2 3 1 - - - - - - - - 1.000
52. CCDC18 ENSDARG00000078822 5 1 - - - - - - - - 1.000 coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
53. si:ch211-113a14.19_5 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 2 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
54. CABZ01112732.1 ENSDARG00000068453 4 1 - - - - - - - - 1.000 tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
55. U6_10 U6_10 0 1 - - - - 1.000 - - - -
56. BX119910.9 BX119910.9 7 1 - - - - 1.000 - - - -
57. CU633740.1 CU633740.1 8 1 - - - - 1.000 - - - -
58. ftr55 ENSDARG00000009161 3 1 - - - - 1.000 - - - - finTRIM family, member 55 [Source:ZFIN;Acc:ZDB-GENE-070424-161]
59. si:ch211-113a14.19_1 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 15 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
60. ttc25 ENSDARG00000058140 2 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
61. FIG4 ENSDARG00000107912 0 1 - - - - - - - - 1.000 FIG4 phosphoinositide 5-phosphatase [Source:HGNC Symbol;Acc:HGNC:16873]
62. vtg4 ENSDARG00000078429, ENSDARG00000116698 0 1 - - - - - - - - 1.000 vitellogenin 4 [Source:ZFIN;Acc:ZDB-GENE-001201-3]
63. slc47a2 2 1 - - - - - - - - 1.000 solute carrier family 47 (multidrug and toxin extrusion), member 2
64. si:dkey-176f19.7 ENSDARG00000103348 10 1 - - - - - - - - 1.000 si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
65. si:ch211-214p13.7 1 1 - - - - - - - - 1.000 si:ch211-214p13.7
66. si:dkey-220o10.3 si:dkey-220o10.3 0 1 - - - - - - - - 1.000
67. si:dkey-34f9.2 si:dkey-34f9.2 0 1 - - - - - - - - 1.000
68. gba ENSDARG00000076058 1 1 - - - - - - - - 1.000 glucosidase, beta, acid [Source:ZFIN;Acc:ZDB-GENE-100922-270]
69. CR749167.1 ENSDARG00000100165 38 1 - - - - 1.000 - - - -
70. si:dkey-21n8.3 si:dkey-21n8.3 5 1 - - - - - 1.000 - - -
71. SNORD15 SNORD15 0 1 - - - - 1.000 - - - -
72. zgc:173443 ENSDARG00000034403 26 1 - - - - 1.000 - - - - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
73. vent ENSDARG00000100483 74 1 - - - - - 1.000 - - - ventral expressed homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-2]
74. ctssa ctssa 24 1 - - - - 1.000 - - - -
75. BX321870.1 ENSDARG00000098519 9 1 - - - - - - - - 1.000
76. trim35-21 ENSDARG00000102303 7 1 - - - - 1.000 - - - - tripartite motif containing 35-21 [Source:ZFIN;Acc:ZDB-GENE-060503-673]
77. CR388160.3 CR388160.3 0 1 - - - - 1.000 - - - -
78. MYO1G ENSDARG00000036104 1 1 - - - - - - - - 1.000 myosin IG [Source:HGNC Symbol;Acc:HGNC:13880]
79. si:dkey-98f17.5 ENSDARG00000068863, ENSDARG00000116489 7 1 - - - - - - - - 1.000 si:dkey-98f17.5 [Source:ZFIN;Acc:ZDB-GENE-060526-354]
80. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
81. si:dkeyp-35e5.5 ENSDARG00000104026 3 1 - - - - 1.000 - - - - si:dkeyp-35e5.5 [Source:ZFIN;Acc:ZDB-GENE-050420-335]
82. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - - - - - - - - 1.000
83. C17H8orf74 C17H8orf74 4 1 - - - - - - - - 1.000
84. U1_16 U1_16 0 1 - - - - 1.000 - - - -
85. si:dkey-252l8.1 si:dkey-252l8.1 2 1 - - - - 1.000 - - - -
86. si:dkeyp-73d8.12 si:dkeyp-73d8.12 0 1 - - - - 1.000 - - - -
87. ptx4 ENSDARG00000038072 2 1 - - - - - - - - 1.000 pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
88. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - - - - - - 1.000 potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
89. si:dkey-286j17.3 si:dkey-286j17.3 8 1 - - - - 1.000 - - - -
90. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - - - 1.000
91. CR381673.3 CR381673.3 4 1 - - - - 1.000 - - - -
92. AL929217.1 ENSDARG00000059891 1 1 - - - - 1.000 - - - - gamma-aminobutyric acid receptor subunit pi-like [Source:NCBI gene;Acc:562831]
93. CDR2_1 CDR2_1 8 1 - - - - - - - - 1.000
94. si:ch211-120f16.3 si:ch211-120f16.3 0 1 - - - - 1.000 - - - -
95. si:ch73-27e22.3 ENSDARG00000077263 10 1 - - - - - - - - 1.000 si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
96. tecpr1a ENSDARG00000062515 7 1 - - - - - - - - 1.000 tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
97. BX119910.4 BX119910.4 0 1 - - - - - - - - 1.000
98. fubp3 ENSDARG00000086896 21 1 - - - - 1.000 - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
99. org ENSDARG00000076474 16 1 - - - - - - - - 1.000 oogenesis-related gene [Source:ZFIN;Acc:ZDB-GENE-050208-584]
100. cyp2n13 ENSDARG00000042953 10 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]

There are 885 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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