Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-198e13.3

Gene Name Gene ID Reads Annotation
si:ch211-198e13.3 5 si:ch211-198e13.3, transcript variant X1










Genes with expression patterns similar to si:ch211-198e13.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-198e13.3 5 4 - 1.000 - - 1.000 1.000 - - 1.000 si:ch211-198e13.3, transcript variant X1
2. ccdc24 ENSDARG00000038793 7 2 - - - - 1.000 - - - 1.000 coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
3. slc5a5 ENSDARG00000005392 6 2 - - - - 1.000 - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
4. zgc:172323 ENSDARG00000053201 1 2 - - - - 1.000 - - - 1.000 zgc:172323 [Source:ZFIN;Acc:ZDB-GENE-080204-113]
5. TMPRSS7 5 1.957 - - - - - 0.957 - - 1.000 transmembrane protease, serine 7
6. CR356223.1 ENSDARG00000093865 1 1.927 - - - - - 0.927 - - 1.000
7. HMGXB3 ENSDARG00000077823 2 1.927 - - - - - 0.927 - - 1.000 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
8. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1.878 - 0.878 - - 1.000 - - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
9. guk1b ENSDARG00000005776 23 1.854 - 0.854 - - 1.000 - - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
10. foxi1 ENSDARG00000104566 176 1.805 - 0.878 - - - 0.927 - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
11. vtg3 ENSDARG00000016448 8 1.805 - 0.878 - - - 0.927 - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
12. tprn ENSDARG00000101102 97 1.747 - 0.878 - - - 0.869 - - - taperin [Source:ZFIN;Acc:ZDB-GENE-081104-254]
13. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1.727 - 0.800 - - - 0.927 - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
14. bmb ENSDARG00000096603 120 1.685 - 0.880 - - - 0.805 - - - brambleberry [Source:ZFIN;Acc:ZDB-GENE-030131-5577]
15. fbxo15 ENSDARG00000016897 18 1.595 - 0.812 - - - 0.783 - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
16. rab11fip1a ENSDARG00000046124 69 1.56 - 0.738 - - - 0.822 - - - RAB11 family interacting protein 1 (class I) a [Source:ZFIN;Acc:ZDB-GENE-051113-116]
17. si:ch211-207c6.5 si:ch211-207c6.5 72 1.511 - 0.790 - - - 0.721 - - -
18. KRT9 KRT9 7 1 - - - - 1.000 - - - -
19. wee1 ENSDARG00000093864, ENSDARG00000114333, ENSDARG00000115653 1 1 - - - - 1.000 - - - - WEE1 G2 checkpoint kinase [Source:ZFIN;Acc:ZDB-GENE-030131-5268]
20. CCDC18 ENSDARG00000078822 5 1 - - - - - - - - 1.000 coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
21. mvb12bb ENSDARG00000079478 9 1 - - - - - - - - 1.000 multivesicular body subunit 12Bb [Source:ZFIN;Acc:ZDB-GENE-080414-2]
22. ptx4 ENSDARG00000038072 2 1 - - - - - - - - 1.000 pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
23. si:ch211-145h19.4 si:ch211-145h19.4 1 1 - - - - - - - - 1.000
24. si:dkeyp-73d8.12 si:dkeyp-73d8.12 0 1 - - - - 1.000 - - - -
25. si:dkey-252l8.1 si:dkey-252l8.1 2 1 - - - - 1.000 - - - -
26. ppid_1 ENSDARG00000038835 4 1 - - - - - - - - 1.000 peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
27. ptger2a ENSDARG00000011434 6 1 - - - - - - - - 1.000 prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
28. vent ENSDARG00000100483 74 1 - - - - - 1.000 - - - ventral expressed homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-2]
29. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - - - - - - 1.000
30. DGKG ENSDARG00000062696 1 1 - - - - 1.000 - - - - diacylglycerol kinase, gamma [Source:ZFIN;Acc:ZDB-GENE-081105-39]
31. UNC119 UNC119 104 1 - - - - 1.000 - - - -
32. CR457462.1 CR457462.1 11 1 - - - - - - - - 1.000
33. grid2 ENSDARG00000055302, ENSDARG00000110593 1 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]
34. SLCO2B1 ENSDARG00000054609 0 1 - - - - - - - - 1.000 solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
35. BX119910.9 BX119910.9 7 1 - - - - 1.000 - - - -
36. apba1a ENSDARG00000103848 0 1 - - - - - - - - 1.000 amyloid beta (A4) precursor protein-binding, family A, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-175]
37. CSF3 CSF3 4 1 - - - - 1.000 - - - -
38. FJX1 ENSDARG00000035873 22 1 - - - - - - - - 1.000 four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
39. si:ch211-254p10.2 ENSDARG00000056750 3 1 - - - - - - - - 1.000 si:ch211-254p10.2 [Source:ZFIN;Acc:ZDB-GENE-100922-17]
40. CABZ01056274.1 CABZ01056274.1 3 1 - - - - - - - - 1.000
41. MYO1G ENSDARG00000036104 1 1 - - - - - - - - 1.000 myosin IG [Source:HGNC Symbol;Acc:HGNC:13880]
42. si:ch211-278p9.3 ENSDARG00000094098 0 1 - - - - - - - - 1.000 si:ch211-278p9.3 [Source:ZFIN;Acc:ZDB-GENE-081028-38]
43. olfcg5 ENSDARG00000102459 5 1 - - - - 1.000 - - - - olfactory receptor C family, g5 [Source:ZFIN;Acc:ZDB-GENE-060503-913]
44. si:ch211-149k23.4 si:ch211-149k23.4 0 1 - - - - 1.000 - - - -
45. CU326366.2 ENSDARG00000068593 11 1 - - - - 1.000 - - - -
46. U1_16 U1_16 0 1 - - - - 1.000 - - - -
47. si:ch73-94f11.5 si:ch73-94f11.5 6 1 - - - - 1.000 - - - -
48. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1 - - - - - - - - 1.000 si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
49. slc35c1 ENSDARG00000104669 65 1 - - - - - - - - 1.000 solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
50. ftr55 ENSDARG00000009161 3 1 - - - - 1.000 - - - - finTRIM family, member 55 [Source:ZFIN;Acc:ZDB-GENE-070424-161]
51. Telomerase-vert Telomerase-vert 8 1 - - - - 1.000 - - - -
52. si:ch211-215l11.8 si:ch211-215l11.8 0 1 - - - - - - - - 1.000
53. GLRA2 ENSDARG00000075012, ENSDARG00000114839 0 1 - - - - - - - - 1.000 glycine receptor, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-090407-1]
54. CR388160.3 CR388160.3 0 1 - - - - 1.000 - - - -
55. si:dkey-111k7.3 si:dkey-111k7.3 0 1 - - - - 1.000 - - - -
56. TRIM8 TRIM8 5 1 - - - - 1.000 - - - -
57. si:dkey-34f9.2 si:dkey-34f9.2 0 1 - - - - - - - - 1.000
58. nudt4b ENSDARG00000045878 10 1 - - - - 1.000 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 4b [Source:ZFIN;Acc:ZDB-GENE-040912-79]
59. CDK18 ENSDARG00000012204 5 1 - - - - - - - - 1.000 cyclin dependent kinase 18 [Source:HGNC Symbol;Acc:HGNC:8751]
60. CDR2_1 CDR2_1 8 1 - - - - - - - - 1.000
61. slc47a2 2 1 - - - - - - - - 1.000 solute carrier family 47 (multidrug and toxin extrusion), member 2
62. trpm3 ENSDARG00000039181 2 1 - - - - 1.000 - - - - transient receptor potential cation channel, subfamily M, member 3 [Source:ZFIN;Acc:ZDB-GENE-060531-95]
63. PDE6H 3 1 - - - - - - - - 1.000 phosphodiesterase 6H, cGMP-specific, cone, gamma, transcript variant 2
64. si:dkey-206f10.5 si:dkey-206f10.5 1 1 - - - - 1.000 - - - -
65. si:dkeyp-51f11.3 si:dkeyp-51f11.3 0 1 - - - - - - - - 1.000
66. si:ch211-202h22.9 ENSDARG00000079980 2 1 - - - - 1.000 - - - - si:ch211-202h22.9 [Source:ZFIN;Acc:ZDB-GENE-030131-1143]
67. CR749167.1 ENSDARG00000100165 38 1 - - - - 1.000 - - - -
68. si:dkey-82i20.3 si:dkey-82i20.3 6 1 - - - - - - - - 1.000
69. hhat ENSDARG00000074428 8 1 - - - - - - - - 1.000 hedgehog acyltransferase [Source:ZFIN;Acc:ZDB-GENE-051118-1]
70. si:ch211-113a14.19_1 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 15 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
71. tmem54 tmem54 3 1 - - - - 1.000 - - - -
72. zgc:92161 ENSDARG00000101749 27 1 - - - - - - - - 1.000 zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
73. CU695216.1 CU695216.1 0 1 - - - - 1.000 - - - -
74. CR381673.3 CR381673.3 4 1 - - - - 1.000 - - - -
75. htr5a htr5a 4 1 - - - - 1.000 - - - -
76. taar20t ENSDARG00000095035 1 1 - - - - 1.000 - - - - trace amine associated receptor 20t [Source:ZFIN;Acc:ZDB-GENE-060414-18]
77. si:dkey-231k6.6 si:dkey-231k6.6 2 1 - - - - 1.000 - - - -
78. BX119910.4 BX119910.4 0 1 - - - - - - - - 1.000
79. sagb ENSDARG00000038378 28 1 - - - - 1.000 - - - - S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
80. dpyda dpyda 12 1 - - - - 1.000 - - - -
81. col5a2b ENSDARG00000024847 17 1 - - - - 1.000 - - - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
82. si:ch73-341k19.1 ENSDARG00000095946 5 1 - - - - - - - - 1.000 si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
83. si:ch211-145m1.3 3 1 - - - - - - - - 1.000 si:ch211-145m1.3
84. pcdh2g16 1 1 - - - - 1.000 - - - - protocadherin 2 gamma 16
85. si:dkey-149m13.2 si:dkey-149m13.2 1 1 - - - - - - - - 1.000
86. si:dkey-25o1.6 si:dkey-25o1.6 5 1 - - - - - - - - 1.000
87. CNBD1 ENSDARG00000091489 0 1 - - - - - - - - 1.000 cyclic nucleotide binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-1022]
88. SH3TC1 ENSDARG00000077330 8 1 - - - - 1.000 - - - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
89. si:dkey-179k24.6 si:dkey-179k24.6 5 1 - - - - - - - - 1.000
90. si:ch73-17k20.1 si:ch73-17k20.1 2 1 - - - - 1.000 - - - -
91. CR556708.1 ENSDARG00000100565 6 1 - - - - 1.000 - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
92. BX511034.1_1 ENSDARG00000071629 0 1 - - - - - - - - 1.000
93. si:ch211-233m11.1 ENSDARG00000074653 1 1 - - - - - - - - 1.000 si:ch211-233m11.1 [Source:ZFIN;Acc:ZDB-GENE-081028-16]
94. dcp2_1 ENSDARG00000104242 74 1 - - - - - - - - 1.000 decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
95. ZCCHC6 2 1 - - - - - - - - 1.000 zinc finger, CCHC domain containing 6
96. lifra ENSDARG00000098857 11 1 - - - - - - - - 1.000 leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
97. btr27 btr27 0 1 - - - - 1.000 - - - -
98. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1 - - - - 1.000 - - - -
99. ENSDARG00000088389 ENSDARG00000088389 2 1 - - - - 1.000 - - - -
100. CABZ01074669.1 CABZ01074669.1 12 1 - - - - - - - - 1.000

There are 885 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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