Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-198c19.3

Gene Name Gene ID Reads Annotation
si:ch211-198c19.3 ENSDARG00000095533 5 si:ch211-198c19.3 [Source:ZFIN;Acc:ZDB-GENE-100922-226]










Genes with expression patterns similar to si:ch211-198c19.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-198c19.3 ENSDARG00000095533 5 5 - - - 1.000 1.000 - 1.000 1.000 1.000 si:ch211-198c19.3 [Source:ZFIN;Acc:ZDB-GENE-100922-226]
2. CABZ01064671.1 ENSDARG00000039935 21 2.454 - - - - 0.702 - 1.000 - 0.752
3. si:dkey-222f8.6 si:dkey-222f8.6 7 2 - - - - 1.000 - 1.000 - -
4. zbtb38 ENSDARG00000100607 17 1.955 - - - - 0.955 - 1.000 - - zinc finger and BTB domain containing 38 [Source:ZFIN;Acc:ZDB-GENE-091204-308]
5. si:dkey-222o15.4 si:dkey-222o15.4 4 1.827 - - - - 1.000 - - - 0.827
6. MAP3K2 ENSDARG00000062884 34 1.811 - - - - - - 1.000 0.811 - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
7. slc8a1a ENSDARG00000013422 12 1.772 - - - - 0.981 - - - 0.791 solute carrier family 8 (sodium/calcium exchanger), member 1a [Source:ZFIN;Acc:ZDB-GENE-050809-1]
8. ccdc170 ENSDARG00000016161 18 1.76 - - - - - - 1.000 - 0.760 coiled-coil domain containing 170 [Source:ZFIN;Acc:ZDB-GENE-070112-162]
9. 5S_rRNA_22 5S_rRNA_22 45 1.724 - - - 0.926 - - 0.798 - -
10. socs7 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 7 1.706 - - - - 1.000 - - - 0.706 suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
11. tbc1d22b ENSDARG00000026988 18 1.704 - - - - - - 1.000 - 0.704 TBC1 domain family, member 22B [Source:ZFIN;Acc:ZDB-GENE-091118-28]
12. CU104716.1 ENSDARG00000109332 12 1.668 - - - - 0.908 - - - 0.760
13. BX469915.2 BX469915.2 48 1.545 - - - - 0.766 - 0.779 - -
14. vav3b ENSDARG00000073713, ENSDARG00000075962 26 1.483 - - - 0.755 0.728 - - - - vav 3 guanine nucleotide exchange factor b [Source:ZFIN;Acc:ZDB-GENE-070912-251]
15. hmgcra ENSDARG00000052734, ENSDARG00000109336 45 1 - - - - - - 1.000 - - 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]
16. sh2d1ab ENSDARG00000074854, ENSDARG00000115149 0 1 - - - - 1.000 - - - - SH2 domain containing 1A duplicate b [Source:ZFIN;Acc:ZDB-GENE-091204-326]
17. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
18. crygs1 ENSDARG00000042992 45 1 - - - - 1.000 - - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
19. ODF2 ODF2 6 1 - - - - 1.000 - - - -
20. slc18b1 ENSDARG00000044047 7 1 - - - - 1.000 - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
21. GABRR3 GABRR3 3 1 - - - - 1.000 - - - -
22. SMCHD1 ENSDARG00000104374 2 1 - - - - 1.000 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
23. si:dkey-27p18.6 4 1 - - - - 1.000 - - - - si:dkey-27p18.6, transcript variant X1
24. ZNF70 ZNF70 2 1 - - - - - - 1.000 - -
25. CU693369.1 CU693369.1 2 1 - - - - - - 1.000 - -
26. si:dkeyp-104f11.5 si:dkeyp-104f11.5 30 1 - - - - - - 1.000 - -
27. MEX3D MEX3D 293 1 - - - - - - 1.000 - -
28. si:dkey-13i19.10 si:dkey-13i19.10 2 1 - - - - 1.000 - - - -
29. CU468142.1 CU468142.1 6 1 - - - - - - 1.000 - -
30. si:dkey-70p6.1 ENSDARG00000092039, ENSDARG00000114631 19 1 - - - - 1.000 - - - - si:dkey-70p6.1 [Source:ZFIN;Acc:ZDB-GENE-040724-140]
31. SNORA42 SNORA42 24 1 - - - - 1.000 - - - -
32. cmpk2 ENSDARG00000031359 1 1 - - - - 1.000 - - - - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040724-24]
33. CABZ01088982.1 ENSDARG00000109259 0 1 - - - - 1.000 - - - -
34. TBC1D10C ENSDARG00000037408 18 1 - - - - - - 1.000 - - TBC1 domain family, member 10C [Source:ZFIN;Acc:ZDB-GENE-130125-1]
35. si:dkey-222p3.1 ENSDARG00000071103, ENSDARG00000109854 16 1 - - - - - - 1.000 - - si:dkey-222p3.1 [Source:ZFIN;Acc:ZDB-GENE-050208-374]
36. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - 1.000 - - - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
37. rag2 ENSDARG00000052121 15 1 - - - - - - 1.000 - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
38. SLC2A11 SLC2A11 5 1 - - - - 1.000 - - - -
39. CMA1_4 CMA1_4 23 1 - - - - - - 1.000 - -
40. si:dkey-179k24.3 si:dkey-179k24.3 3 1 - - - - 1.000 - - - -
41. CABZ01015475.1 ENSDARG00000104841 6 1 - - - - - - 1.000 - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
42. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 1 - - - - - - 1.000 - -
43. BX569789.5 BX569789.5 0 1 - - - - 1.000 - - - -
44. lgals3bpa ENSDARG00000037805 2 1 - - - - 1.000 - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]
45. si:ch211-255g12.5 si:ch211-255g12.5 7 1 - - - - - - 1.000 - -
46. abcd1 ENSDARG00000074876 6 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
47. si:ch73-335d12.1 si:ch73-335d12.1 1 1 - - - - 1.000 - - - -
48. agrn_1 ENSDARG00000079388, ENSDARG00000110127 47 1 - - - - - - 1.000 - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
49. taar14l ENSDARG00000069213 11 1 - - - - 1.000 - - - - trace amine associated receptor 14l [Source:ZFIN;Acc:ZDB-GENE-041014-31]
50. nlgn4b 1 1 - - - - 1.000 - - - - neuroligin 4b, transcript variant X1
51. cyp2k6 ENSDARG00000009874, ENSDARG00000098995 2 1 - - - - - - 1.000 - - cytochrome P450, family 2, subfamily K, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1571]
52. zfp64 ENSDARG00000061147 44 1 - - - - - - 1.000 - - zinc finger protein 64 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-031118-80]
53. 5S_rRNA_29 5S_rRNA_29 0 1 - - - - 1.000 - - - -
54. trim35-38 trim35-38 3 1 - - - - 1.000 - - - -
55. WDR63 ENSDARG00000105093 13 1 - - - - - - 1.000 - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
56. CIT_1 CIT_1 6 1 - - - - - - 1.000 - -
57. pcdh2g8 2 1 - - - - - - 1.000 - - protocadherin 2 gamma 8
58. si:dkey-240n22.3 ENSDARG00000095013 0 1 - - - - 1.000 - - - - si:dkey-240n22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-409]
59. dcst2 ENSDARG00000088693 1 1 - - - - 1.000 - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
60. BX004873.3 BX004873.3 59 1 - - - - - - 1.000 - -
61. TMEM81 TMEM81 0 1 - - - - 1.000 - - - -
62. wu:fd60c08 wu:fd60c08 35 1 - - - - - - 1.000 - -
63. si:dkey-258p11.1 si:dkey-258p11.1 48 1 - - - - - - 1.000 - -
64. si:ch211-113a14.26_2 0 1 - - - - - - 1.000 - - si:ch211-113a14.26
65. CU469531.1 ENSDARG00000067872 0 1 - - - - - - 1.000 - -
66. U1_18 U1_18 0 1 - - - - 1.000 - - - -
67. ftr43 ENSDARG00000076106 2 1 - - - - - - 1.000 - - finTRIM family, member 43 [Source:ZFIN;Acc:ZDB-GENE-090507-8]
68. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
69. CR391962.2 CR391962.2 0 1 - - - - 1.000 - - - -
70. CU633740.1 CU633740.1 8 1 - - - - - - 1.000 - -
71. CU481774.2 CU481774.2 1 1 - - - - - - 1.000 - -
72. eomesa ENSDARG00000006640 257 1 - - - - - - 1.000 - - eomesodermin homolog a [Source:ZFIN;Acc:ZDB-GENE-001228-1]
73. si:ch211-3o3.7 si:ch211-3o3.7 0 1 - - - - 1.000 - - - -
74. si:dkey-250k10.3 si:dkey-250k10.3 2 1 - - - - 1.000 - - - -
75. loxl4 ENSDARG00000025089 5 1 - - - - 1.000 - - - - lysyl oxidase-like 4 [Source:ZFIN;Acc:ZDB-GENE-080722-19]
76. mir125a-1 2 1 - - - - 1.000 - - - - microRNA 125a-1
77. mirlet7b 0 1 - - - - 1.000 - - - - microRNA let7b
78. si:ch211-1f22.4 si:ch211-1f22.4 2 1 - - - - 1.000 - - - -
79. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - 1.000 - - - -
80. ido1 ENSDARG00000033594 0 1 - - - - 1.000 - - - - indoleamine 2,3-dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-080228-2]
81. rcv1 rcv1 77 1 - - - - - - 1.000 - -
82. hapln4 ENSDARG00000018542 10 1 - - - - - - 1.000 - - hyaluronan and proteoglycan link protein 4 [Source:ZFIN;Acc:ZDB-GENE-060503-243]
83. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 1 - - - - 1.000 - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
84. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
85. PRPF6 ENSDARG00000091367 48 1 - - - - - - 1.000 - - PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
86. CABZ01089980.1 ENSDARG00000117446 16 1 - - - - - - 1.000 - -
87. FNDC7_1 FNDC7_1 3 1 - - - - - - 1.000 - -
88. slc26a4 ENSDARG00000069431 2 1 - - - - 1.000 - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
89. si:dkey-20j10.2 si:dkey-20j10.2 8 1 - - - - - - 1.000 - -
90. ptk2ba ENSDARG00000022841 19 1 - - - - - - 1.000 - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
91. BX465848.1 ENSDARG00000114947 1 1 - - - - 1.000 - - - -
92. si:ch211-206i14.2 si:ch211-206i14.2 3 1 - - - - 1.000 - - - -
93. CU459094.1 ENSDARG00000110517 17 1 - - - - - - 1.000 - - uncharacterized LOC108191666 [Source:NCBI gene;Acc:108191666]
94. fam228a ENSDARG00000042936, ENSDARG00000114092 30 1 - - - - - - 1.000 - - family with sequence similarity 228, member A [Source:ZFIN;Acc:ZDB-GENE-041014-83]
95. OVGP1 ENSDARG00000075745 6 1 - - - - 1.000 - - - - oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
96. ENDOD1 ENDOD1 1 1 - - - - - - 1.000 - -
97. Metazoa_SRP_3 Metazoa_SRP_3 0 1 - - - - 1.000 - - - -
98. CMKLR1_1 CMKLR1_1 2 1 - - - - - - 1.000 - -
99. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
100. edar ENSDARG00000099088 1 1 - - - - - - 1.000 - - ectodysplasin A receptor [Source:ZFIN;Acc:ZDB-GENE-070117-2062]

There are 713 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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