Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-198c19.1

Gene Name Gene ID Reads Annotation
si:ch211-198c19.1 ENSDARG00000089333 3 si:ch211-198c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-218]










Genes with expression patterns similar to si:ch211-198c19.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-198c19.1 ENSDARG00000089333 3 4 - 1.000 - - 1.000 1.000 - 1.000 - si:ch211-198c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-218]
2. sdhaf1 ENSDARG00000092478 51 2 - 1.000 - - - 1.000 - - - succinate dehydrogenase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050809-56]
3. si:ch211-122l14.7 ENSDARG00000095576 5 2 - 1.000 - - - 1.000 - - - si:ch211-122l14.7 [Source:ZFIN;Acc:ZDB-GENE-041014-263]
4. TMC2 TMC2 5 2 - 1.000 - - - 1.000 - - -
5. CABZ01075242.1 ENSDARG00000114227 9 2 - 1.000 - - - - - 1.000 -
6. si:ch211-218c6.9 si:ch211-218c6.9 40 2 - 1.000 - - - 1.000 - - -
7. si:ch211-113a14.15_1 2 2 - 1.000 - - - 1.000 - - - si:ch211-113a14.15
8. zgc:110434 21 2 - 1.000 - - - 1.000 - - - zgc:110434
9. CABZ01035647.1 CABZ01035647.1 5 2 - - - - 1.000 1.000 - - -
10. camk1db ENSDARG00000017446 47 1.959 - 1.000 - - - 0.959 - - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
11. CABZ01030107.1 ENSDARG00000058631 52 1.928 - 1.000 - - 0.928 - - - -
12. cyp2j20 ENSDARG00000094057 44 1.883 - 1.000 - - - 0.883 - - - cytochrome P450, family 2, subfamily J, polypeptide 20 [Source:ZFIN;Acc:ZDB-GENE-041210-324]
13. PPFIBP1 PPFIBP1 46 1.881 - 0.881 - - - 1.000 - - -
14. SRCIN1 SRCIN1 5 1.869 - 1.000 - - - - - 0.869 -
15. lmx1a ENSDARG00000020354 111 1.859 - 1.000 - - - 0.859 - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
16. CU571323.1 CU571323.1 7 1.854 - 1.000 - - - - - 0.854 -
17. NTRK3 NTRK3 163 1.854 - 1.000 - - - 0.854 - - -
18. si:dkey-117n7.4 ENSDARG00000092064 22 1.762 - - - - 0.762 1.000 - - - si:dkey-117n7.4 [Source:ZFIN;Acc:ZDB-GENE-060503-237]
19. dctn1b ENSDARG00000056753 6 1.47 - 0.704 - - - - - 0.766 - dynactin 1b [Source:ZFIN;Acc:ZDB-GENE-050419-28]
20. TMEM74 26 1 - 1.000 - - - - - - - transmembrane protein 74, transcript variant X3
21. slc26a6l ENSDARG00000054127 8 1 - 1.000 - - - - - - - solute carrier family 26, member 6, like [Source:ZFIN;Acc:ZDB-GENE-080220-10]
22. hel_dr4 hel_dr4 12 1 - - - - - 1.000 - - -
23. gfra3 ENSDARG00000087704 122 1 - 1.000 - - - - - - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
24. nfixa ENSDARG00000043226 14 1 - 1.000 - - - - - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
25. BX897671.1 BX897671.1 10 1 - - - - 1.000 - - - -
26. coch ENSDARG00000024032 7 1 - - - - - 1.000 - - - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
27. si:dkey-43b14.8 35 1 - 1.000 - - - - - - - si:dkey-43b14.8
28. cntn2 ENSDARG00000000472, ENSDARG00000110222 3 1 - - - - - 1.000 - - - contactin 2 [Source:ZFIN;Acc:ZDB-GENE-990630-12]
29. mir184 48 1 - 1.000 - - - - - - - microRNA 184
30. EGFR_1 EGFR_1 2 1 - - - - - 1.000 - - -
31. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1 - 1.000 - - - - - - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
32. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - 1.000 - - - - - - -
33. arl11l arl11l 31 1 - 1.000 - - - - - - -
34. tmigd1 ENSDARG00000007040 19 1 - 1.000 - - - - - - - transmembrane and immunoglobulin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080303-6]
35. slc17a6a ENSDARG00000001127 337 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
36. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 1 - 1.000 - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
37. FYB FYB 3 1 - - - - 1.000 - - - -
38. adarb1b ENSDARG00000003544 31 1 - - - - - 1.000 - - - adenosine deaminase, RNA-specific, B1b [Source:ZFIN;Acc:ZDB-GENE-030219-15]
39. si:dkey-14i17.2 si:dkey-14i17.2 10 1 - 1.000 - - - - - - -
40. si:dkey-192l18.10 3 1 - - - - - - - 1.000 - si:dkey-192l18.10
41. hdac11 ENSDARG00000087573 1 1 - - - - - - - 1.000 - histone deacetylase 11 [Source:ZFIN;Acc:ZDB-GENE-040704-7]
42. fbxo43 ENSDARG00000104186 40 1 - - - - - 1.000 - - - F-box protein 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1645]
43. si:dkey-161j23.6 ENSDARG00000092347 0 1 - - - - - 1.000 - - - si:dkey-161j23.6 [Source:ZFIN;Acc:ZDB-GENE-091204-173]
44. mtmr10 ENSDARG00000010601 37 1 - - - - - 1.000 - - - myotubularin related protein 10 [Source:ZFIN;Acc:ZDB-GENE-061103-52]
45. napgl napgl 39 1 - - - - - 1.000 - - -
46. nebl ENSDARG00000021200 40 1 - 1.000 - - - - - - - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
47. cyp2p7 ENSDARG00000042980 29 1 - - - - - - - 1.000 - cytochrome P450, family 2, subfamily P, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-041001-155]
48. zgc:113307 ENSDARG00000044894 17 1 - 1.000 - - - - - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
49. ABCA7 ABCA7 12 1 - 1.000 - - - - - - -
50. FMN1_1 FMN1_1 13 1 - - - - - - - 1.000 -
51. si:ch73-191k20.4 37 1 - - - - - 1.000 - - - si:ch73-191k20.4, transcript variant X1
52. ENSDARG00000088231 ENSDARG00000088231 0 1 - 1.000 - - - - - - -
53. CABZ01066439.2 CABZ01066439.2 5 1 - 1.000 - - - - - - -
54. si:ch211-141e20.2 ENSDARG00000093349 61 1 - 1.000 - - - - - - - si:ch211-141e20.2 [Source:ZFIN;Acc:ZDB-GENE-070912-75]
55. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - 1.000 - - - si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
56. dnmt3aa ENSDARG00000005394 63 1 - - - - - 1.000 - - - DNA (cytosine-5-)-methyltransferase 3 alpha a [Source:ZFIN;Acc:ZDB-GENE-050314-5]
57. si:ch211-239m17.2 si:ch211-239m17.2 1 1 - 1.000 - - - - - - -
58. GRIK3 ENSDARG00000077715 178 1 - 1.000 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
59. DKK3 DKK3 12 1 - 1.000 - - - - - - -
60. CABZ01036951.1 CABZ01036951.1 71 1 - - - - - 1.000 - - -
61. mthfd2l ENSDARG00000054199 25 1 - 1.000 - - - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-5707]
62. si:dkey-49o11.1 0 1 - 1.000 - - - - - - - si:dkey-49o11.1
63. si:dkey-176f19.2 si:dkey-176f19.2 6 1 - - - - - - - 1.000 -
64. RIC3 ENSDARG00000105549 3 1 - - - - - 1.000 - - - RIC3 acetylcholine receptor chaperone [Source:HGNC Symbol;Acc:HGNC:30338]
65. KCNJ12 KCNJ12 17 1 - - - - - 1.000 - - -
66. crispld1a ENSDARG00000077275 7 1 - 1.000 - - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
67. si:dkey-250k10.4 ENSDARG00000099751 2 1 - - - - - 1.000 - - - si:dkey-250k10.4 [Source:ZFIN;Acc:ZDB-GENE-120703-22]
68. lingo1a ENSDARG00000034165 179 1 - 1.000 - - - - - - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
69. abcg2a ENSDARG00000100075 2 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family G (WHITE), member 2a [Source:ZFIN;Acc:ZDB-GENE-050517-35]
70. fam163b ENSDARG00000073914 46 1 - 1.000 - - - - - - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
71. ftr26 ENSDARG00000092961 1 1 - - - - - - - 1.000 - finTRIM family, member 26 [Source:ZFIN;Acc:ZDB-GENE-070912-316]
72. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 1 - 1.000 - - - - - - - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
73. slc17a6b ENSDARG00000041150 823 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
74. U6_23 U6_23 0 1 - 1.000 - - - - - - -
75. sc:d136 sc:d136 2 1 - 1.000 - - - - - - -
76. xkr8.2 ENSDARG00000076820 51 1 - 1.000 - - - - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-110106-2]
77. neflb ENSDARG00000012426 298 1 - 1.000 - - - - - - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
78. si:dkeyp-79c2.1 42 1 - 1.000 - - - - - - - si:dkeyp-79c2.1, transcript variant X2
79. BX572078.1 ENSDARG00000099083 1 1 - 1.000 - - - - - - -
80. si:dkey-272j9.2 si:dkey-272j9.2 91 1 - 1.000 - - - - - - -
81. si:dkey-20j1.5 si:dkey-20j1.5 1 1 - - - - - 1.000 - - -
82. ADTRP ADTRP 2 1 - - - - - - - 1.000 -
83. DEPDC7 19 1 - - - - - 1.000 - - - DEP domain containing 7, transcript variant X1
84. FAM184A ENSDARG00000014081 34 1 - 1.000 - - - - - - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
85. morc3b ENSDARG00000043271 8 1 - 1.000 - - - - - - - MORC family CW-type zinc finger 3b [Source:ZFIN;Acc:ZDB-GENE-040801-98]
86. hspb15 ENSDARG00000078411 6 1 - 1.000 - - - - - - - heat shock protein, alpha-crystallin-related, b15 [Source:ZFIN;Acc:ZDB-GENE-080214-5]
87. ttc6 ENSDARG00000104125 7 1 - 1.000 - - - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
88. CR944667.4 CR944667.4 2 1 - - - - 1.000 - - - -
89. AL928685.1 ENSDARG00000095786 0 1 - - - - - 1.000 - - -
90. bdnf ENSDARG00000018817 193 1 - 1.000 - - - - - - - brain-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-000412-1]
91. CABZ01086828.1 CABZ01086828.1 1 1 - 1.000 - - - - - - -
92. si:ch1073-221c23.2 si:ch1073-221c23.2 17 1 - - - - - 1.000 - - -
93. C10H5orf63 C10H5orf63 17 1 - 1.000 - - - - - - -
94. spata20 ENSDARG00000013880 46 1 - 1.000 - - - - - - - spermatogenesis associated 20 [Source:ZFIN;Acc:ZDB-GENE-030131-7269]
95. tti2 ENSDARG00000073773 19 1 - - - - - 1.000 - - - TELO2 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-110411-25]
96. GJD2_1 GJD2_1 3045 1 - 1.000 - - - - - - -
97. ENDOD1_4 ENDOD1_4 2 1 - - - - - 1.000 - - -
98. cnga3b ENSDARG00000012297 2 1 - 1.000 - - - - - - - cyclic nucleotide gated channel alpha 3b [Source:ZFIN;Acc:ZDB-GENE-090312-121]
99. ptpn20 ENSDARG00000075459 1 1 - - - - - 1.000 - - - protein tyrosine phosphatase, non-receptor type 20 [Source:ZFIN;Acc:ZDB-GENE-090313-90]
100. si:ch211-22k7.8 si:ch211-22k7.8 0 1 - - - - - 1.000 - - -

There are 693 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA