Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-198a12.6

Gene Name Gene ID Reads Annotation
si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]










Genes with expression patterns similar to si:ch211-198a12.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
2. midn ENSDARG00000018524 7559 2.518 - - - - - - 0.831 0.746 0.941 midnolin [Source:ZFIN;Acc:ZDB-GENE-030131-2433]
3. pdia3 ENSDARG00000102640 7239 2.486 - 0.754 0.994 - - - 0.738 - - protein disulfide isomerase family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-031002-9]
4. fscn1a ENSDARG00000059680 3999 2.4 - - - 0.737 - - 0.797 0.866 - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
5. znf865 ENSDARG00000036698 15532 2.382 - - 0.960 0.707 - - 0.715 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
6. snrpf ENSDARG00000105037 10241 2.339 - 0.758 - 0.749 - - 0.832 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
7. ssbp4 ENSDARG00000056483 10196 2.271 - 0.750 - - - - 0.727 0.794 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
8. puf60a ENSDARG00000032175 5618 2.196 - 0.701 - - - 0.758 0.737 - - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
9. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 1.932 - - 0.995 - - - - - 0.937 Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
10. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 1.887 - - - - - 0.914 - - 0.973 ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
11. sec61g ENSDARG00000018637, ENSDARG00000117172 4899 1.858 - - - - - 0.895 - - 0.963 Sec61 translocon gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040718-203]
12. erh ENSDARG00000032866 20633 1.851 - - 0.950 - - 0.901 - - - enhancer of rudimentary homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-990415-57]
13. vta1 ENSDARG00000013732 6072 1.835 - - - - - 0.852 - - 0.983 vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
14. rplp2l ENSDARG00000011201 77026 1.835 - - 0.973 - - - - - 0.862 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
15. ik ENSDARG00000004161 3132 1.831 - - 0.995 - - 0.836 - - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
16. ubqln4 ENSDARG00000052975 6453 1.813 - - - - - - 0.836 - 0.977 ubiquilin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6269]
17. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 1.8 - - - - - 0.826 - - 0.974 aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
18. blzf1 ENSDARG00000011299 2568 1.767 - 0.772 0.995 - - - - - - basic leucine zipper nuclear factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-1]
19. ppp2cb ENSDARG00000099241, ENSDARG00000111489 25466 1.76 - - 0.990 - - - 0.770 - - protein phosphatase 2, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-040426-2487]
20. ash2l ENSDARG00000060392 4916 1.746 - - 0.995 0.751 - - - - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
21. smo ENSDARG00000002952 6411 1.746 - - 0.990 - - - 0.756 - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
22. tmed7 ENSDARG00000046022 2435 1.743 - 0.769 - - - - - - 0.974 transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
23. si:dkey-177p2.6 ENSDARG00000042322 2783 1.74 - - 0.995 - - - 0.745 - - si:dkey-177p2.6 [Source:ZFIN;Acc:ZDB-GENE-030131-5926]
24. naa15a ENSDARG00000003213 5889 1.732 - - - - - - 0.761 - 0.971 N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
25. tfdp1b ENSDARG00000016304 3071 1.73 - - 0.995 - - - 0.735 - - transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
26. ppil2 ENSDARG00000002016, ENSDARG00000116167 914 1.72 0.868 - - - - 0.852 - - - peptidylprolyl isomerase (cyclophilin)-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1096]
27. atp5mf ENSDARG00000037867 11052 1.719 - 0.741 - - - - - - 0.978 ATP synthase membrane subunit f [Source:ZFIN;Acc:ZDB-GENE-050309-87]
28. snx6 ENSDARG00000058444 2645 1.712 - 0.844 - - - - 0.868 - - sorting nexin 6 [Source:ZFIN;Acc:ZDB-GENE-050913-152]
29. ndufa2 ENSDARG00000021984 4754 1.711 - 0.730 - - - - - - 0.981 NADH:ubiquinone oxidoreductase subunit A2 [Source:ZFIN;Acc:ZDB-GENE-050522-377]
30. eif4ebp1 ENSDARG00000043608, ENSDARG00000113927 9982 1.704 - 0.711 0.993 - - - - - - eukaryotic translation initiation factor 4E binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2332]
31. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 1.701 - - - - - - - 0.727 0.974 DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
32. myeov2 3351 1.695 - 0.749 - - - 0.946 - - - myeloma overexpressed 2
33. nup155 ENSDARG00000001777 3417 1.693 - - - - - - 0.717 - 0.976 nucleoporin 155 [Source:ZFIN;Acc:ZDB-GENE-040426-711]
34. dnaja2 ENSDARG00000104066 11946 1.679 - 0.803 - - - 0.876 - - - DnaJ (Hsp40) homolog, subfamily A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2884]
35. safb ENSDARG00000020467 5608 1.674 - 0.788 - - - 0.886 - - - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
36. chtopa ENSDARG00000057234 3287 1.672 - - - - - 0.833 0.839 - - chromatin target of PRMT1a [Source:ZFIN;Acc:ZDB-GENE-030131-210]
37. ubtf ENSDARG00000035066 4070 1.665 - 0.848 - - - - 0.817 - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
38. pip5k1ab ENSDARG00000024642 1988 1.65 - - - - - 0.886 - 0.764 - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]
39. bckdk ENSDARG00000016904 3775 1.639 0.759 - - - - 0.880 - - - branched chain ketoacid dehydrogenase kinase [Source:ZFIN;Acc:ZDB-GENE-021204-1]
40. serinc1 ENSDARG00000009106 10571 1.637 - 0.792 - - - - 0.845 - - serine incorporator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4415]
41. gtf2e2 ENSDARG00000012672, ENSDARG00000109689, ENSDARG00000115211 1677 1.636 - - - - - 0.867 0.769 - - general transcription factor IIE, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-030131-6794]
42. cdc34b ENSDARG00000012627 3879 1.635 - - - - - 0.820 0.815 - - cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
43. kmt2e ENSDARG00000007523 1851 1.628 - - - - - 0.866 0.762 - - lysine (K)-specific methyltransferase 2E [Source:ZFIN;Acc:ZDB-GENE-030131-4120]
44. hk1 ENSDARG00000039452, ENSDARG00000110447, ENSDARG00000112051 5026 1.626 - 0.823 - - - - 0.803 - - hexokinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2848]
45. zgc:158409 zgc:158409 21963 1.617 - 0.858 - 0.759 - - - - -
46. actn1 ENSDARG00000007219 2919 1.613 - 0.718 - - - 0.895 - - - actinin, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081113-4]
47. rabac1 ENSDARG00000004171 2708 1.609 0.766 - - - - 0.843 - - - Rab acceptor 1 (prenylated) [Source:ZFIN;Acc:ZDB-GENE-040625-146]
48. nkap ENSDARG00000033450, ENSDARG00000116152 1929 1.607 - - - - - 0.854 0.753 - - NFKB activating protein [Source:ZFIN;Acc:ZDB-GENE-030131-8064]
49. brd8 ENSDARG00000025071 2605 1.606 - - - - - 0.848 0.758 - - bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
50. med31 ENSDARG00000008020 4161 1.603 - - - - - 0.813 0.790 - - mediator complex subunit 31 [Source:ZFIN;Acc:ZDB-GENE-040718-114]
51. cln6a ENSDARG00000077584 1090 1.601 - - - - - 0.877 0.724 - - CLN6, transmembrane ER protein a [Source:ZFIN;Acc:ZDB-GENE-041010-57]
52. si:dkey-13i19.8 ENSDARG00000093058 4617 1.601 - 0.793 - - - 0.808 - - - si:dkey-13i19.8 [Source:ZFIN;Acc:ZDB-GENE-041210-156]
53. minos1 ENSDARG00000101619 5273 1.6 - 0.844 - - - - 0.756 - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
54. tm7sf3 ENSDARG00000093658 754 1.599 - - - - - 0.839 0.760 - - transmembrane 7 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1770]
55. parp1 ENSDARG00000019529 6787 1.594 - - - - 0.731 - - 0.863 - poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
56. TNRC6A ENSDARG00000079688 14433 1.594 - - - - - - 0.718 - 0.876 trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
57. nipa2 ENSDARG00000055912 1574 1.591 0.739 - - - - 0.852 - - - NIPA magnesium transporter 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2134]
58. ptpn9a ENSDARG00000077495 2295 1.582 - - - - - 0.859 0.723 - - protein tyrosine phosphatase, non-receptor type 9, a [Source:ZFIN;Acc:ZDB-GENE-101027-1]
59. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 1.58 - - - - - 0.852 - 0.728 - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
60. bcas2 ENSDARG00000043631 1971 1.579 - - - - - 0.820 0.759 - - BCAS2, pre-mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-030408-5]
61. crkl ENSDARG00000028699 2966 1.578 - 0.784 - - - 0.794 - - - v-crk avian sarcoma virus CT10 oncogene homolog-like [Source:ZFIN;Acc:ZDB-GENE-040426-2951]
62. sf3a3 ENSDARG00000100114 4511 1.577 - - - - - 0.875 0.702 - - splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
63. g2e3 ENSDARG00000001313 1485 1.576 - - - - - 0.864 0.712 - - G2/M-phase specific E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030616-400]
64. sbds ENSDARG00000027803 846 1.574 - - - - - 0.841 0.733 - - SBDS, ribosome maturation factor [Source:ZFIN;Acc:ZDB-GENE-040426-1116]
65. elovl6l ENSDARG00000038639 1184 1.571 0.760 - - - - 0.811 - - - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
66. dusp4 ENSDARG00000044688, ENSDARG00000112584, ENSDARG00000116379 3232 1.563 - 0.717 - - - 0.846 - - - dual specificity phosphatase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-709]
67. txnrd1 11401 1.562 - - - - - 0.858 0.704 - - thioredoxin reductase 1
68. fryl ENSDARG00000040001 3256 1.558 - - - - - 0.811 0.747 - - furry homolog, like [Source:ZFIN;Acc:ZDB-GENE-040914-58]
69. stau2 ENSDARG00000026801, ENSDARG00000112268 5161 1.557 - - - - - 0.828 0.729 - - staufen double-stranded RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-687]
70. tet3 ENSDARG00000062646 6672 1.557 - 0.742 - - - 0.815 - - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
71. nup88 ENSDARG00000003235, ENSDARG00000111135 1114 1.556 - - - - - 0.851 0.705 - - nucleoporin 88 [Source:ZFIN;Acc:ZDB-GENE-050522-297]
72. uba3 ENSDARG00000057987, ENSDARG00000116639 1181 1.555 - - - - - 0.803 0.752 - - ubiquitin-like modifier activating enzyme 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2825]
73. scaf1 ENSDARG00000054010 3752 1.55 0.825 0.725 - - - - - - - SR-related CTD-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-120215-214]
74. TMEM185A TMEM185A 5505 1.546 - 0.736 - - - - 0.810 - -
75. cltcb ENSDARG00000090716 5544 1.54 - 0.713 - - - - 0.827 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
76. psmb7 ENSDARG00000037962 11542 1.54 - 0.783 - - - - 0.757 - - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
77. dvl2 ENSDARG00000056184 1525 1.539 - - - - - 0.810 0.729 - - dishevelled segment polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-041118-20]
78. pak2b ENSDARG00000018476 4331 1.539 0.819 - - - - - 0.720 - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
79. PELP1 ENSDARG00000079313 5771 1.538 - - - - - 0.767 0.771 - - proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
80. slc20a1b ENSDARG00000010641 2564 1.538 - - - - - 0.748 0.790 - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
81. ubap2 ubap2 4167 1.53 - 0.726 - - - - 0.804 - -
82. rnf13 ENSDARG00000019438 1560 1.53 0.816 0.714 - - - - - - - ring finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-040426-772]
83. CHST5 CHST5 1293 1.527 0.777 - - - - 0.750 - - -
84. mrps21 ENSDARG00000070985 3943 1.525 - 0.792 - - - - 0.733 - - mitochondrial ribosomal protein S21 [Source:ZFIN;Acc:ZDB-GENE-070615-13]
85. tmpob ENSDARG00000022978 8121 1.525 - - - 0.804 - - 0.721 - - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
86. gspt1l ENSDARG00000098627 8381 1.523 - 0.812 - - - - 0.711 - - G1 to S phase transition 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-4009]
87. vps29 ENSDARG00000069521 5599 1.521 0.729 - - - - - 0.792 - - vacuolar protein sorting 29 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8764]
88. cse1l ENSDARG00000006963 3261 1.519 - - - 0.797 - - 0.722 - - CSE1 chromosome segregation 1-like (yeast) [Source:ZFIN;Acc:ZDB-GENE-990603-1]
89. fam160a1 fam160a1 1445 1.516 - 0.705 - - - 0.811 - - -
90. brd3b ENSDARG00000100129 6387 1.514 - 0.785 - - - - - 0.729 - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
91. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 1.514 - 0.700 - - - 0.814 - - - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
92. aco2 ENSDARG00000007294, ENSDARG00000111879 5162 1.506 - 0.804 - - - - 0.702 - - aconitase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-1390]
93. TSPY2 TSPY2 1371 1.503 - - - - - 0.762 0.741 - -
94. hnrnpk ENSDARG00000018914 8841 1.503 - - - 0.719 - - 0.784 - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
95. h3f3a 66671 1.499 - - - - - - 0.753 0.746 - H3 histone, family 3A, transcript variant X1
96. smarce1 ENSDARG00000016871 9628 1.497 - - - - - - 0.772 0.725 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
97. ttk ENSDARG00000041361 3911 1.496 - - - - - 0.787 0.709 - - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
98. fam32al fam32al 5716 1.495 - 0.724 - - - - - 0.771 -
99. map3k7 ENSDARG00000020469 2845 1.495 - 0.787 - - - 0.708 - - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
100. sypl2a ENSDARG00000055307, ENSDARG00000115972 7103 1.493 - 0.734 - - - 0.759 - - - synaptophysin-like 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1434]

There are 1489 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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