Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-197n1.2

Gene Name Gene ID Reads Annotation
si:ch211-197n1.2 58 si:ch211-197n1.2, transcript variant X1










Genes with expression patterns similar to si:ch211-197n1.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-197n1.2 58 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-197n1.2, transcript variant X1
2. zgc:110821 ENSDARG00000077085 210 1.924 - 0.984 - - - - 0.940 - - zgc:110821 [Source:ZFIN;Acc:ZDB-GENE-050227-8]
3. gcgrb ENSDARG00000036272 54 1.796 - 0.985 - - - - 0.811 - - glucagon receptor b [Source:ZFIN;Acc:ZDB-GENE-050516-2]
4. CCDC13 ENSDARG00000063451 10 1.784 - - - - 0.990 - - - 0.794 coiled-coil domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-061207-11]
5. NF1 NF1 62 1.764 - - - - 0.837 0.927 - - -
6. PAQR8 ENSDARG00000088828 26 1.732 - - - - 0.862 - 0.870 - - progestin and adipoQ receptor family member VIII [Source:ZFIN;Acc:ZDB-GENE-030728-3]
7. PDE4B PDE4B 13 1.711 - - - - 0.985 - - - 0.726
8. si:dkeyp-4f2.5 si:dkeyp-4f2.5 232 1.701 0.838 - - - 0.863 - - - -
9. iqsec2 iqsec2 304 1.697 0.725 0.972 - - - - - - -
10. si:ch211-199m9.3 50 1.691 0.949 0.742 - - - - - - - si:ch211-199m9.3, transcript variant X3
11. adamts9 ENSDARG00000077778 419 1.682 0.737 0.945 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 9 [Source:ZFIN;Acc:ZDB-GENE-070814-6]
12. lamb1a_1 ENSDARG00000101209 13 1.676 0.702 0.974 - - - - - - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
13. dclre1a ENSDARG00000091768 94 1.652 - - - - - 0.927 0.725 - - DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-124]
14. ebpl ENSDARG00000036636 79 1.648 - 0.860 - - - - 0.788 - - EBP like [Source:ZFIN;Acc:ZDB-GENE-030616-542]
15. lingo1b ENSDARG00000035899 86 1.641 - - - - 0.857 - - - 0.784 leucine rich repeat and Ig domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040912-136]
16. CABZ01069006.1 CABZ01069006.1 363 1.641 - 0.772 - - 0.869 - - - -
17. si:ch211-10a23.2 ENSDARG00000060656 471 1.641 - 0.882 - - - - - - 0.759 si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
18. CABZ01084942.1 ENSDARG00000100332 69 1.637 - 0.910 - - 0.727 - - - -
19. foxf1 ENSDARG00000015399 205 1.636 - 0.744 - - 0.892 - - - - forkhead box F1 [Source:ZFIN;Acc:ZDB-GENE-050419-153]
20. zgc:113220 ENSDARG00000014775 235 1.627 - 0.830 - - - - 0.797 - - zgc:113220 [Source:ZFIN;Acc:ZDB-GENE-050320-64]
21. tekt2 ENSDARG00000028973 160 1.602 0.868 - - - - - 0.734 - - tektin 2 (testicular) [Source:ZFIN;Acc:ZDB-GENE-040113-1]
22. HHIPL2 ENSDARG00000060008 162 1.595 - 0.789 - - 0.806 - - - - HHIP-like 2 [Source:ZFIN;Acc:ZDB-GENE-131120-145]
23. CABZ01084007.1 CABZ01084007.1 199 1.595 - 0.800 - - 0.795 - - - -
24. ccdc130 ENSDARG00000041533, ENSDARG00000113467 281 1.592 - 0.862 - - - 0.730 - - - coiled-coil domain containing 130 [Source:ZFIN;Acc:ZDB-GENE-040912-36]
25. si:dkey-208k4.1 si:dkey-208k4.1 15 1.564 - - 0.720 - 0.844 - - - -
26. tbx5b ENSDARG00000092060 37 1.507 - - - - - - 0.750 - 0.757 T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
27. ska3 ENSDARG00000069917, ENSDARG00000114978 497 1.489 - 0.735 - - - - 0.754 - - spindle and kinetochore associated complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2997]
28. si:dkey-259p7.1 si:dkey-259p7.1 59 1.482 0.702 - - - - - 0.780 - -
29. top3b ENSDARG00000027586 8 1.476 - - - - - - 0.750 - 0.726 DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
30. GIPR ENSDARG00000025478 87 1 - - - - - - 1.000 - - gastric inhibitory polypeptide receptor [Source:ZFIN;Acc:ZDB-GENE-050516-4]
31. enpep ENSDARG00000057064 84 1 1.000 - - - - - - - - glutamyl aminopeptidase [Source:ZFIN;Acc:ZDB-GENE-050309-218]
32. polg2 ENSDARG00000074933 117 1 - - - - - - 1.000 - - polymerase (DNA directed), gamma 2, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060810-116]
33. tdrd7 tdrd7 31 0.991 - - - - - - 0.991 - -
34. fam150ba 4 0.99 - - - - 0.990 - - - - family with sequence similarity 150, member Ba, transcript variant X3
35. sult1st3 ENSDARG00000018361 7 0.99 - - - - 0.990 - - - - sulfotransferase family 1, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-030804-28]
36. ppil6 ENSDARG00000042157 45 0.99 - - - - 0.990 - - - - peptidylprolyl isomerase (cyclophilin)-like 6 [Source:ZFIN;Acc:ZDB-GENE-050522-70]
37. CABZ01078481.1 CABZ01078481.1 6 0.99 - - - - 0.990 - - - -
38. si:ch211-210m1.1 si:ch211-210m1.1 4 0.99 - - - - 0.990 - - - -
39. lrrc18a ENSDARG00000078790 4 0.99 - - - - 0.990 - - - - leucine rich repeat containing 18a [Source:ZFIN;Acc:ZDB-GENE-090313-323]
40. lacc1 ENSDARG00000076914 11 0.99 - - - - 0.990 - - - - laccase (multicopper oxidoreductase) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-155]
41. zgc:154054 ENSDARG00000099923 19 0.99 - - - - 0.990 - - - - zgc:154054 [Source:ZFIN;Acc:ZDB-GENE-061103-283]
42. CCDC83 ENSDARG00000077179 29 0.99 - - - - 0.990 - - - - coiled-coil domain containing 83 [Source:ZFIN;Acc:ZDB-GENE-130723-1]
43. ighv1-2 ENSDARG00000096350 8 0.99 - - - - 0.990 - - - - immunoglobulin heavy variable 1-2 [Source:ZFIN;Acc:ZDB-GENE-030924-2]
44. p2rx4b ENSDARG00000042452 14 0.989 - - - - 0.989 - - - - purinergic receptor P2X, ligand-gated ion channel, 4b [Source:ZFIN;Acc:ZDB-GENE-030319-4]
45. SERINC3 SERINC3 21 0.989 - - - - 0.989 - - - -
46. si:dkey-22l11.6 ENSDARG00000070126 27 0.989 - - - - 0.989 - - - - si:dkey-22l11.6 [Source:ZFIN;Acc:ZDB-GENE-041210-251]
47. si:dkey-17m8.2 ENSDARG00000035797 40 0.989 - - - - 0.989 - - - - si:dkey-17m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-234]
48. si:dkey-121n8.5 si:dkey-121n8.5 10 0.988 - - - - 0.988 - - - -
49. mink1 ENSDARG00000035360, ENSDARG00000112785 13 0.988 - - - - 0.988 - - - - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
50. WDR93 ENSDARG00000087191 51 0.987 - - - - 0.987 - - - - WD repeat domain 93 [Source:ZFIN;Acc:ZDB-GENE-161017-52]
51. si:ch211-76l23.5 si:ch211-76l23.5 26 0.987 - 0.987 - - - - - - -
52. ttc5 ENSDARG00000013329, ENSDARG00000113967 219 0.987 - 0.987 - - - - - - - tetratricopeptide repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-050417-137]
53. xdh ENSDARG00000055240 250 0.987 - 0.987 - - - - - - - xanthine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070719-9]
54. tmie ENSDARG00000069423 305 0.985 - 0.985 - - - - - - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
55. CR847998.1 ENSDARG00000104784 518 0.985 - 0.985 - - - - - - -
56. htra1a ENSDARG00000032831, ENSDARG00000111829 1008 0.983 - 0.983 - - - - - - - HtrA serine peptidase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-64]
57. si:dkeyp-87d8.9 si:dkeyp-87d8.9 21 0.981 - - - - 0.981 - - - -
58. si:dkey-222o15.5 si:dkey-222o15.5 27 0.98 - - - - 0.980 - - - -
59. agtr1b ENSDARG00000045443 232 0.979 - 0.979 - - - - - - - angiotensin II receptor, type 1b [Source:ZFIN;Acc:ZDB-GENE-110411-117]
60. ubox5 ENSDARG00000058563 161 0.978 0.978 - - - - - - - - U-box domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-110411-166]
61. zgc:174642_3 zgc:174642_3 8 0.977 - - - - 0.977 - - - -
62. gabrg2 ENSDARG00000053665 434 0.977 - 0.977 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
63. zgc:158856 zgc:158856 23 0.976 - 0.976 - - - - - - -
64. CR388013.3 CR388013.3 45 0.974 - 0.974 - - - - - - -
65. CABZ01112647.1 CABZ01112647.1 147 0.974 - 0.974 - - - - - - -
66. si:dkey-149i8.3 si:dkey-149i8.3 9 0.974 - 0.974 - - - - - - -
67. si:dkey-30j10.5 ENSDARG00000093186 13 0.974 - 0.974 - - - - - - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
68. HTRA4 ENSDARG00000005943 77 0.974 - 0.974 - - - - - - - HtrA serine peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-131120-192]
69. FRRS1 FRRS1 80 0.974 - 0.974 - - - - - - -
70. opn1mw1 ENSDARG00000097008 9 0.974 - 0.974 - - - - - - - opsin 1 (cone pigments), medium-wave-sensitive, 1 [Source:ZFIN;Acc:ZDB-GENE-990604-42]
71. MYO1C MYO1C 140 0.974 - 0.974 - - - - - - -
72. VASH1 ENSDARG00000092716 33 0.974 - 0.974 - - - - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
73. BX569789.1 ENSDARG00000099678 4 0.974 - 0.974 - - - - - - - GTPase IMAP family member 4-like [Source:NCBI gene;Acc:571582]
74. epha8 22 0.974 - 0.974 - - - - - - - eph receptor A8
75. znf142 ENSDARG00000061373 47 0.974 - 0.974 - - - - - - - zinc finger protein 142 [Source:ZFIN;Acc:ZDB-GENE-080512-2]
76. ndufs8b ENSDARG00000057055 10 0.974 - 0.974 - - - - - - - NADH:ubiquinone oxidoreductase core subunit S8b [Source:ZFIN;Acc:ZDB-GENE-050522-131]
77. SOX8 SOX8 22 0.974 - 0.974 - - - - - - -
78. SSTR2 SSTR2 12 0.974 - 0.974 - - - - - - -
79. si:ch211-126g16.8 3 0.974 - 0.974 - - - - - - - si:ch211-126g16.8, transcript variant X1
80. RBM44 RBM44 25 0.974 - 0.974 - - - - - - -
81. cers4a ENSDARG00000031387 19 0.974 - 0.974 - - - - - - - ceramide synthase 4a [Source:ZFIN;Acc:ZDB-GENE-020808-1]
82. CR847511.1 CR847511.1 80 0.974 - 0.974 - - - - - - -
83. FKBP15 FKBP15 15 0.974 - 0.974 - - - - - - -
84. itln2_1 ENSDARG00000036084, ENSDARG00000093796, ENSDARG00000115958 3 0.974 - 0.974 - - - - - - - intelectin 2 [Source:NCBI gene;Acc:100007792]
85. olfml3a ENSDARG00000061852 139 0.974 - 0.974 - - - - - - - olfactomedin-like 3a [Source:ZFIN;Acc:ZDB-GENE-060825-31]
86. si:dkey-1b17.5 ENSDARG00000101425 130 0.974 - 0.974 - - - - - - - si:dkey-1b17.5 [Source:ZFIN;Acc:ZDB-GENE-050208-704]
87. pyya ENSDARG00000053449 134 0.974 - 0.974 - - - - - - - peptide YYa [Source:ZFIN;Acc:ZDB-GENE-980526-71]
88. si:ch211-251f6.7 ENSDARG00000091558 25 0.974 - 0.974 - - - - - - - si:ch211-251f6.7 [Source:ZFIN;Acc:ZDB-GENE-091113-57]
89. ch25hl1.1 ENSDARG00000039381, ENSDARG00000109469, ENSDARG00000113169 838 0.974 - 0.974 - - - - - - - cholesterol 25-hydroxylase like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8617]
90. MCC ENSDARG00000105237 4 0.974 - 0.974 - - - - - - - MCC, WNT signaling pathway regulator [Source:ZFIN;Acc:ZDB-GENE-141210-1]
91. BX005421.3 ENSDARG00000114309 7 0.974 - 0.974 - - - - - - -
92. BX511263.1 BX511263.1 64 0.974 - 0.974 - - - - - - -
93. TARBP1 TARBP1 17 0.974 - 0.974 - - - - - - -
94. si:dkey-90a24.1 3 0.974 - 0.974 - - - - - - - si:dkey-90a24.1, transcript variant X4
95. TTF1_2 TTF1_2 26 0.974 - 0.974 - - - - - - -
96. CABZ01035647.1 CABZ01035647.1 5 0.974 - 0.974 - - - - - - -
97. CU367845.1_1 CU367845.1_1 43 0.974 - 0.974 - - - - - - -
98. FMN1_1 FMN1_1 13 0.974 - 0.974 - - - - - - -
99. p2ry10 ENSDARG00000062811, ENSDARG00000111991, ENSDARG00000112838 4 0.974 - 0.974 - - - - - - - P2Y receptor family member 10 [Source:ZFIN;Acc:ZDB-GENE-070410-105]
100. cfhl1 ENSDARG00000105212, ENSDARG00000111582 35 0.974 - 0.974 - - - - - - - complement factor H like 1 [Source:ZFIN;Acc:ZDB-GENE-050208-342]

There are 1127 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA