Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-197k17.3

Gene Name Gene ID Reads Annotation
si:ch211-197k17.3 ENSDARG00000096214 2 si:ch211-197k17.3 [Source:ZFIN;Acc:ZDB-GENE-110914-193]










Genes with expression patterns similar to si:ch211-197k17.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-197k17.3 ENSDARG00000096214 2 3 1.000 - - - 1.000 - - - 1.000 si:ch211-197k17.3 [Source:ZFIN;Acc:ZDB-GENE-110914-193]
2. pdcl ENSDARG00000009480 12 1.867 1.000 - - - - - - - 0.867 phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
3. ndrg1b ENSDARG00000010420 116 1.796 1.000 - - - 0.796 - - - - N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
4. prop1 ENSDARG00000039756, ENSDARG00000109950, ENSDARG00000114449 10 1 - - - - - - - - 1.000 PROP paired-like homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-081107-40]
5. chrm2a ENSDARG00000098612 5 1 1.000 - - - - - - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
6. si:dkey-199m13.1 si:dkey-199m13.1 3 1 - - - - - - - - 1.000
7. gh1 ENSDARG00000038185 1 1 - - - - - - - - 1.000 growth hormone 1 [Source:ZFIN;Acc:ZDB-GENE-030725-2]
8. si:dkey-208k22.1 si:dkey-208k22.1 1 1 - - - - - - - - 1.000
9. spry1 ENSDARG00000103985 0 1 - - - - - - - - 1.000 sprouty homolog 1, antagonist of FGF signaling (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-081215-2]
10. guca1d ENSDARG00000044629, ENSDARG00000115722 22 1 - - - - - - - - 1.000 guanylate cyclase activator 1d [Source:ZFIN;Acc:ZDB-GENE-040724-231]
11. hel_dr4 hel_dr4 12 1 - - - - - - - - 1.000
12. si:ch211-227e10.2 ENSDARG00000100414 1 1 - - - - - - - - 1.000 si:ch211-227e10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-8]
13. TRIM46 TRIM46 73 1 1.000 - - - - - - - -
14. CR942805.1 CR942805.1 94 1 - - - - - - - - 1.000
15. GABRA3 ENSDARG00000090883 5 1 1.000 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
16. BTBD17_1 BTBD17_1 42 1 1.000 - - - - - - - -
17. cpne5 cpne5 16 1 1.000 - - - - - - - -
18. CR848032.2 CR848032.2 0 1 - - - - - - - - 1.000
19. si:dkey-11o15.5 ENSDARG00000095592 1 1 - - - - 1.000 - - - - si:dkey-11o15.5 [Source:ZFIN;Acc:ZDB-GENE-091204-172]
20. cga ENSDARG00000040479 3 1 - - - - - - - - 1.000 glycoprotein hormones, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040715-2]
21. CR388013.1 CR388013.1 3 1 - - - - - - - - 1.000
22. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1 - - - - - - - - 1.000 POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
23. AL935272.2 AL935272.2 37 1 1.000 - - - - - - - -
24. fam101a 4 1 - - - - - - - - 1.000 family with sequence similarity 101, member A
25. CR352256.1 CR352256.1 3 1 - - - - - - - - 1.000
26. 5S_rRNA_31 5S_rRNA_31 3 1 1.000 - - - - - - - -
27. ldlrad4 ldlrad4 0 1 - - - - - - - - 1.000
28. BX004980.1 ENSDARG00000099680 10 1 - - - - - - - - 1.000
29. CT583709.2 CT583709.2 55 1 1.000 - - - - - - - -
30. ENSDARG00000088328 ENSDARG00000088328 2 1 - - - - - - - - 1.000
31. chrna9 ENSDARG00000054680 4 1 1.000 - - - - - - - - cholinergic receptor, nicotinic, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-090312-63]
32. htr2a htr2a 1 1 - - - - - - - - 1.000
33. six6a ENSDARG00000025187 40 1 1.000 - - - - - - - - SIX homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-040426-1282]
34. 5S_rRNA_27 5S_rRNA_27 2 1 - - - - - - - - 1.000
35. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 1 1.000 - - - - - - - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
36. GALNT9 ENSDARG00000006832 120 1 1.000 - - - - - - - - polypeptide N-acetylgalactosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060526-21]
37. si:ch211-89f22.1 si:ch211-89f22.1 11 1 - - - - - - - - 1.000
38. ATG7 ENSDARG00000102893 1 1 - - - - - - - - 1.000 ATG7 autophagy related 7 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1633]
39. syne2a_1 0 1 - - - - - - - - 1.000 spectrin repeat containing, nuclear envelope 2a
40. si:ch211-133l5.7 ENSDARG00000095633 3 1 1.000 - - - - - - - - si:ch211-133l5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-117]
41. KCNIP4 ENSDARG00000088100 86 1 1.000 - - - - - - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
42. RPS11 ENSDARG00000053058 32 1 - - - - - - - - 1.000 ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
43. INTS5 ENSDARG00000077943 0 1 - - - - - - - - 1.000 integrator complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-090908-2]
44. SNORA63 SNORA63 7 1 1.000 - - - - - - - -
45. DYDC2 ENSDARG00000101848 2 1 - - - - - - - - 1.000 DPY30 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-121030-3]
46. cryaba ENSDARG00000042621 2 1 1.000 - - - - - - - - crystallin, alpha B, a [Source:ZFIN;Acc:ZDB-GENE-991119-2]
47. CNTNAP1 ENSDARG00000074524 73 1 1.000 - - - - - - - - contactin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030916-2]
48. si:dkey-47k16.1 si:dkey-47k16.1 5 1 - - - - - - - - 1.000
49. TMEM100_1 TMEM100_1 44 1 1.000 - - - - - - - -
50. aspscr1_1 ENSDARG00000105321 4 1 1.000 - - - - - - - - alveolar soft part sarcoma chromosome region, candidate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-31]
51. CLTCL1_2 CLTCL1_2 1 1 - - - - - - - - 1.000
52. snapc1a ENSDARG00000029569 25 1 1.000 - - - - - - - - small nuclear RNA activating complex, polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1031]
53. SNORA53 SNORA53 10 1 - - - - - - - - 1.000
54. CU571315.2 ENSDARG00000101956 15 1 - - - - - - - - 1.000
55. COL18A1 COL18A1 0 1 - - - - - - - - 1.000
56. si:ch211-113a14.10 si:ch211-113a14.10 2 1 - - - - - - - - 1.000
57. si:ch211-255f4.4 si:ch211-255f4.4 0 1 - - - - - - - - 1.000
58. CMA1_8 CMA1_8 10 1 - - - - - - - - 1.000
59. fam178a fam178a 29 1 1.000 - - - - - - - -
60. BX005234.1 ENSDARG00000097761 3 1 - - - - - - - - 1.000
61. CLTCL1_1 CLTCL1_1 1 1 1.000 - - - - - - - -
62. LPHN2_1 LPHN2_1 3 1 - - - - - - - - 1.000
63. kcnk15 ENSDARG00000077371 1 1 - - - - - - - - 1.000 potassium channel, subfamily K, member 15 [Source:ZFIN;Acc:ZDB-GENE-080220-30]
64. asah2 ENSDARG00000012829 13 1 - - - - - - - - 1.000 N-acylsphingosine amidohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-041112-1]
65. si:ch211-196c10.13 ENSDARG00000096756 28 1 - - - - - - - - 1.000 si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]
66. EPM2AIP1 EPM2AIP1 4 1 1.000 - - - - - - - -
67. si:ch211-220f16.1 ENSDARG00000093977 4 1 - - - - - - - - 1.000 si:ch211-220f16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-198]
68. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 1.000 - - - - - - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
69. si:ch211-201o1.1 ENSDARG00000088689 1 1 - - - - - - - - 1.000 si:ch211-201o1.1 [Source:ZFIN;Acc:ZDB-GENE-120709-60]
70. SLC2A13 SLC2A13 74 1 1.000 - - - - - - - -
71. U11 U11 11 1 - - - - - - - - 1.000
72. lhfpl4b ENSDARG00000076943 0 1 - - - - - - - - 1.000 LHFPL tetraspan subfamily member 4b [Source:ZFIN;Acc:ZDB-GENE-110216-4]
73. BX248120.1 BX248120.1 4 1 1.000 - - - - - - - -
74. CABZ01033205.2 CABZ01033205.2 5 1 - - - - - - - - 1.000
75. CU694320.1 CU694320.1 6 1 - - - - - - - - 1.000
76. KCNT2 ENSDARG00000075812 23 1 1.000 - - - - - - - - potassium channel, subfamily T, member 2 [Source:ZFIN;Acc:ZDB-GENE-130530-783]
77. CDH7 16 1 - - - - 1.000 - - - - cadherin 7, type 2, transcript variant X1
78. SP5 SP5 8 1 - - - - - - - - 1.000
79. CR936408.1 ENSDARG00000078938 15 1 - - - - - - - - 1.000 uncharacterized LOC799523 [Source:NCBI gene;Acc:799523]
80. SDR16C5 SDR16C5 34 1 - - - - - - - - 1.000
81. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 1 - - - - 1.000 - - - - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
82. si:ch73-119o17.1 si:ch73-119o17.1 6 1 - - - - - - - - 1.000
83. zgc:172051 ENSDARG00000086569 12 1 - - - - - - - - 1.000 zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
84. CU861664.1 CU861664.1 53 1 - - - - 1.000 - - - -
85. CR391962.1 CR391962.1 31 1 1.000 - - - - - - - -
86. pigf ENSDARG00000032780 7 1 - - - - - - - - 1.000 phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
87. si:ch211-178j18.2 si:ch211-178j18.2 1 1 - - - - - - - - 1.000
88. VDAC3 ENSDARG00000003695 34 1 - - - - 1.000 - - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
89. dnajb1b ENSDARG00000041394 25 1 - - - - - - - - 1.000 DnaJ (Hsp40) homolog, subfamily B, member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5455]
90. zfp64 ENSDARG00000061147 44 1 1.000 - - - - - - - - zinc finger protein 64 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-031118-80]
91. BX324142.2 ENSDARG00000117006 1 1 - - - - - - - - 1.000
92. si:ch211-222b21.3 si:ch211-222b21.3 2 1 - - - - - - - - 1.000
93. si:dkey-241l7.2 ENSDARG00000105335 6 1 - - - - - - - - 1.000 si:dkey-241l7.2 [Source:ZFIN;Acc:ZDB-GENE-041014-240]
94. C8H20orf112 C8H20orf112 1 1 - - - - - - - - 1.000
95. vetz 12 1 - - - - - - - - 1.000 vezatin, adherens junctions transmembrane protein, transcript variant X2
96. si:dkey-43f9.1_1 si:dkey-43f9.1_1 3 1 - - - - - - - - 1.000
97. CABZ01073118.1 CABZ01073118.1 1 1 - - - - - - - - 1.000
98. CU896645.1 CU896645.1 10 1 1.000 - - - - - - - -
99. SIGLEC15 SIGLEC15 10 1 - - - - - - - - 1.000
100. nog2 ENSDARG00000043066 233 1 1.000 - - - - - - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]

There are 409 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA