Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-197k17.3

Gene Name Gene ID Reads Annotation
si:ch211-197k17.3 ENSDARG00000096214 2 si:ch211-197k17.3 [Source:ZFIN;Acc:ZDB-GENE-110914-193]










Genes with expression patterns similar to si:ch211-197k17.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-197k17.3 ENSDARG00000096214 2 3 1.000 - - - 1.000 - - - 1.000 si:ch211-197k17.3 [Source:ZFIN;Acc:ZDB-GENE-110914-193]
2. pdcl ENSDARG00000009480 12 1.867 1.000 - - - - - - - 0.867 phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
3. ndrg1b ENSDARG00000010420 116 1.796 1.000 - - - 0.796 - - - - N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
4. hel_dr4 hel_dr4 12 1 - - - - - - - - 1.000
5. ca4a ENSDARG00000043589 1 1 - - - - - - - - 1.000 carbonic anhydrase IV a [Source:ZFIN;Acc:ZDB-GENE-080204-85]
6. si:ch211-201o1.1 ENSDARG00000088689 1 1 - - - - - - - - 1.000 si:ch211-201o1.1 [Source:ZFIN;Acc:ZDB-GENE-120709-60]
7. si:ch211-227e10.2 ENSDARG00000100414 1 1 - - - - - - - - 1.000 si:ch211-227e10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-8]
8. CR936408.1 ENSDARG00000078938 15 1 - - - - - - - - 1.000 uncharacterized LOC799523 [Source:NCBI gene;Acc:799523]
9. si:dkey-11o15.5 ENSDARG00000095592 1 1 - - - - 1.000 - - - - si:dkey-11o15.5 [Source:ZFIN;Acc:ZDB-GENE-091204-172]
10. cryaba ENSDARG00000042621 2 1 1.000 - - - - - - - - crystallin, alpha B, a [Source:ZFIN;Acc:ZDB-GENE-991119-2]
11. VDAC3 ENSDARG00000003695 34 1 - - - - 1.000 - - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
12. zgc:113343 ENSDARG00000103196 2 1 - - - - - - - - 1.000 zgc:113343 [Source:ZFIN;Acc:ZDB-GENE-050327-90]
13. si:ch211-196c10.13 ENSDARG00000096756 28 1 - - - - - - - - 1.000 si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]
14. zp2.3 ENSDARG00000090237 45 1 - - - - - - - - 1.000 zona pellucida glycoprotein 2, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-010622-2]
15. zgc:172128 ENSDARG00000101883, ENSDARG00000104208 28 1 1.000 - - - - - - - - zgc:172128 [Source:ZFIN;Acc:ZDB-GENE-080220-2]
16. prop1 ENSDARG00000039756, ENSDARG00000109950, ENSDARG00000114449 10 1 - - - - - - - - 1.000 PROP paired-like homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-081107-40]
17. si:dkey-43f9.1_1 si:dkey-43f9.1_1 3 1 - - - - - - - - 1.000
18. cd28 ENSDARG00000095070 0 1 - - - - - - - - 1.000 CD28 molecule [Source:ZFIN;Acc:ZDB-GENE-070912-128]
19. zfp64 ENSDARG00000061147 44 1 1.000 - - - - - - - - zinc finger protein 64 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-031118-80]
20. VWDE ENSDARG00000103443 10 1 - - - - - - - - 1.000 von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
21. si:ch211-222b21.3 si:ch211-222b21.3 2 1 - - - - - - - - 1.000
22. snapc1a ENSDARG00000029569 25 1 1.000 - - - - - - - - small nuclear RNA activating complex, polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1031]
23. gpr37l1b ENSDARG00000056774, ENSDARG00000114481 143 1 1.000 - - - - - - - - G protein-coupled receptor 37 like 1b [Source:ZFIN;Acc:ZDB-GENE-081104-324]
24. TRIM46 TRIM46 73 1 1.000 - - - - - - - -
25. si:dkey-211i20.3 si:dkey-211i20.3 1 1 - - - - - - - - 1.000
26. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - - - - - 1.000
27. si:ch211-167j6.3 ENSDARG00000095504 5 1 1.000 - - - - - - - - si:ch211-167j6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-145]
28. si:dkey-238o14.1 ENSDARG00000100099 1 1 1.000 - - - - - - - - si:dkey-238o14.1 [Source:ZFIN;Acc:ZDB-GENE-081103-10]
29. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1 - - - - - - - - 1.000 POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
30. CU896645.1 CU896645.1 10 1 1.000 - - - - - - - -
31. si:ch211-284e13.9 ENSDARG00000093214 2 1 - - - - - - - - 1.000 si:ch211-284e13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-164]
32. vetz 12 1 - - - - - - - - 1.000 vezatin, adherens junctions transmembrane protein, transcript variant X2
33. CRYGM4 ENSDARG00000008219 1 1 - - - - - - - - 1.000 crystallin, gamma M4 [Source:ZFIN;Acc:ZDB-GENE-120312-2]
34. CU638740.4 CU638740.4 1 1 - - - - - - - - 1.000
35. ldlrad4 ldlrad4 0 1 - - - - - - - - 1.000
36. DNER ENSDARG00000061031 123 1 1.000 - - - - - - - - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
37. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1 - - - - - - - - 1.000
38. spata20 ENSDARG00000013880 46 1 1.000 - - - - - - - - spermatogenesis associated 20 [Source:ZFIN;Acc:ZDB-GENE-030131-7269]
39. C6H22orf23 C6H22orf23 15 1 - - - - - - - - 1.000
40. si:ch211-169j7.3 si:ch211-169j7.3 4 1 - - - - - - - - 1.000
41. CMA1_8 CMA1_8 10 1 - - - - - - - - 1.000
42. zgc:174710 13 1 1.000 - - - - - - - - zgc:174710
43. si:dkey-176f19.5 si:dkey-176f19.5 10 1 - - - - - - - - 1.000
44. bcat1 ENSDARG00000045568 39 1 1.000 - - - - - - - - branched chain amino-acid transaminase 1, cytosolic [Source:ZFIN;Acc:ZDB-GENE-030131-9358]
45. ubr1 ENSDARG00000060480 71 1 1.000 - - - - - - - - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
46. C20H2orf70 C20H2orf70 8 1 1.000 - - - - - - - -
47. BX005234.1 ENSDARG00000097761 3 1 - - - - - - - - 1.000
48. efr3ba ENSDARG00000033516 19 1 1.000 - - - - - - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
49. DYDC2 ENSDARG00000101848 2 1 - - - - - - - - 1.000 DPY30 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-121030-3]
50. si:dkey-265e15.2 ENSDARG00000089582, ENSDARG00000113391 1 1 - - - - - - - - 1.000 si:dkey-265e15.2 [Source:ZFIN;Acc:ZDB-GENE-081103-3]
51. cpne5 cpne5 16 1 1.000 - - - - - - - -
52. si:ch211-133l5.7 ENSDARG00000095633 3 1 1.000 - - - - - - - - si:ch211-133l5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-117]
53. tnfrsfa ENSDARG00000004451 4 1 - - - - - - - - 1.000 tumor necrosis factor receptor superfamily, member a [Source:ZFIN;Acc:ZDB-GENE-010802-1]
54. prpf4 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 10 1 1.000 - - - - - - - - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
55. CR848032.2 CR848032.2 0 1 - - - - - - - - 1.000
56. C8H20orf112 C8H20orf112 1 1 - - - - - - - - 1.000
57. taar16a ENSDARG00000054237 1 1 1.000 - - - - - - - - trace amine associated receptor 16a [Source:ZFIN;Acc:ZDB-GENE-100514-1]
58. CABZ01033205.2 CABZ01033205.2 5 1 - - - - - - - - 1.000
59. si:dkey-241l7.2 ENSDARG00000105335 6 1 - - - - - - - - 1.000 si:dkey-241l7.2 [Source:ZFIN;Acc:ZDB-GENE-041014-240]
60. dnajb1b ENSDARG00000041394 25 1 - - - - - - - - 1.000 DnaJ (Hsp40) homolog, subfamily B, member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5455]
61. BX511182.1 BX511182.1 8 1 - - - - - - - - 1.000
62. zgc:92658 8 1 - - - - - - - - 1.000 zgc:92658
63. si:dkey-208k22.1 si:dkey-208k22.1 1 1 - - - - - - - - 1.000
64. SYDE1 ENSDARG00000077440 4 1 - - - - - - - - 1.000 synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
65. fam101a 4 1 - - - - - - - - 1.000 family with sequence similarity 101, member A
66. CT025894.1 CT025894.1 0 1 - - - - - - - - 1.000
67. SNORD46 SNORD46 0 1 - - - - - - - - 1.000
68. zp2.2 ENSDARG00000105346 23 1 - - - - - - - - 1.000 zona pellucida glycoprotein 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-010622-1]
69. BX897747.1 ENSDARG00000117746 11 1 1.000 - - - - - - - -
70. si:ch73-119o17.1 si:ch73-119o17.1 6 1 - - - - - - - - 1.000
71. tdrd6 ENSDARG00000070052 1 1 - - - - - - - - 1.000 tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
72. TMEM100_1 TMEM100_1 44 1 1.000 - - - - - - - -
73. U11 U11 11 1 - - - - - - - - 1.000
74. zgc:112965 ENSDARG00000007787 5 1 1.000 - - - - - - - - zgc:112965 [Source:ZFIN;Acc:ZDB-GENE-050522-10]
75. NUDT13 ENSDARG00000057417, ENSDARG00000115835 5 1 - - - - - - - - 1.000 nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
76. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 1 1.000 - - - - - - - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
77. BSN_1 BSN_1 21 1 1.000 - - - - - - - -
78. kcnk15 ENSDARG00000077371 1 1 - - - - - - - - 1.000 potassium channel, subfamily K, member 15 [Source:ZFIN;Acc:ZDB-GENE-080220-30]
79. CR388416.3 CR388416.3 1 1 - - - - - - - - 1.000
80. CR352256.1 CR352256.1 3 1 - - - - - - - - 1.000
81. BX469910.2 ENSDARG00000096127 6 1 1.000 - - - - - - - -
82. zgc:114037_4 57 1 1.000 - - - - - - - - zgc:114037
83. fam178a fam178a 29 1 1.000 - - - - - - - -
84. C14H11orf80 C14H11orf80 1 1 - - - - - - - - 1.000
85. KCNIP4 ENSDARG00000088100 86 1 1.000 - - - - - - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
86. si:dkey-81i14.3 si:dkey-81i14.3 1 1 - - - - - - - - 1.000
87. si:ch211-15o14.2 si:ch211-15o14.2 6 1 - - - - - - - - 1.000
88. gabrr2a ENSDARG00000052982 21 1 1.000 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
89. zgc:165409_1 ENSDARG00000091385 65 1 1.000 - - - - - - - - zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
90. CLTCL1_1 CLTCL1_1 1 1 1.000 - - - - - - - -
91. BX248120.1 BX248120.1 4 1 1.000 - - - - - - - -
92. CABZ01073118.1 CABZ01073118.1 1 1 - - - - - - - - 1.000
93. LPHN2_1 LPHN2_1 3 1 - - - - - - - - 1.000
94. si:ch211-131e11.14 si:ch211-131e11.14 7 1 - - - - - - - - 1.000
95. CDH7 16 1 - - - - 1.000 - - - - cadherin 7, type 2, transcript variant X1
96. six6a ENSDARG00000025187 40 1 1.000 - - - - - - - - SIX homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-040426-1282]
97. NUGGC NUGGC 9 1 - - - - - - - - 1.000
98. KSR1_1 KSR1_1 1 1 - - - - - - - - 1.000
99. nog2 ENSDARG00000043066 233 1 1.000 - - - - - - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
100. gpr12 ENSDARG00000062934 7 1 1.000 - - - - - - - - G protein-coupled receptor 12 [Source:ZFIN;Acc:ZDB-GENE-100209-3]

There are 409 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA