Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-197h24.6

Gene Name Gene ID Reads Annotation
si:ch211-197h24.6 ENSDARG00000091631 1933 si:ch211-197h24.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1361]










Genes with expression patterns similar to si:ch211-197h24.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-197h24.6 ENSDARG00000091631 1933 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-197h24.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1361]
2. CDCA4 ENSDARG00000042319 7918 2.578 - - - 0.791 0.977 0.810 - - - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
3. esd ENSDARG00000019496 3192 2.488 - 0.806 - - 0.978 - 0.704 - - esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
4. sf1 ENSDARG00000008188 5142 2.437 - - - - 0.957 0.749 - - 0.731 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
5. cd99l2 ENSDARG00000056722 5036 2.397 - 0.826 - - - 0.848 0.723 - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
6. mdkb ENSDARG00000020708 5393 2.348 - 0.861 - 0.714 - 0.773 - - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
7. tmsb ENSDARG00000054911 6411 2.318 - 0.704 - - - 0.774 0.840 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
8. tcf7l1b ENSDARG00000007369 2785 2.3 - 0.808 - - - 0.705 0.787 - - transcription factor 7 like 1b [Source:ZFIN;Acc:ZDB-GENE-991110-10]
9. gipc1 ENSDARG00000104483 2913 2.293 - - - 0.703 - 0.853 0.737 - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
10. tmem35 ENSDARG00000052567 5685 2.269 - 0.793 - 0.713 - - 0.763 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
11. tmem47 ENSDARG00000057322 4691 2.211 - - - - 0.705 0.710 0.796 - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
12. hnrnpub ENSDARG00000004735 16496 2.151 - - - - - 0.708 0.732 - 0.711 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
13. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 1.852 - 0.859 - - 0.993 - - - - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
14. pcif1 ENSDARG00000099084 2851 1.796 - - - - 0.987 0.809 - - - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
15. atp1b4 ENSDARG00000053262 1337 1.795 - - - - 0.996 0.799 - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
16. tra2a ENSDARG00000007863 4449 1.776 - - 0.799 - 0.977 - - - - transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
17. ipo4 ENSDARG00000041493 1578 1.771 - - - - 0.990 - 0.781 - - importin 4 [Source:ZFIN;Acc:ZDB-GENE-041014-307]
18. efnb3b ENSDARG00000042277 5823 1.767 - 0.822 - - 0.945 - - - - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
19. cuedc1b ENSDARG00000054748 1638 1.754 - 0.765 - - 0.989 - - - - CUE domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070424-29]
20. actr1 ENSDARG00000011611 3879 1.75 - 0.790 - - 0.960 - - - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
21. si:dkey-251i10.2 ENSDARG00000093957 4424 1.746 - - - - 0.995 - 0.751 - - si:dkey-251i10.2 [Source:ZFIN;Acc:ZDB-GENE-050506-102]
22. nmt1a ENSDARG00000052966 5918 1.733 - 0.742 - - 0.991 - - - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
23. ube2a ENSDARG00000098466 12765 1.728 - - - - 0.922 - 0.806 - - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
24. mrgbp ENSDARG00000028894, ENSDARG00000110790 1316 1.728 - - - - 0.986 - - - 0.742 MRG/MORF4L binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1698]
25. mtor ENSDARG00000053196 2156 1.723 - - - 0.733 0.990 - - - - mechanistic target of rapamycin kinase [Source:ZFIN;Acc:ZDB-GENE-030131-2974]
26. ptgr1 ENSDARG00000024877, ENSDARG00000115676 4312 1.718 - - - - 0.986 - 0.732 - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
27. tmem198a ENSDARG00000042115 1694 1.709 - - - - 0.962 - - - 0.747 transmembrane protein 198a [Source:ZFIN;Acc:ZDB-GENE-070912-716]
28. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.709 - - - - 0.958 - - - 0.751 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
29. CABZ01013938.1 CABZ01013938.1 4497 1.707 0.754 - - - 0.953 - - - -
30. clgn ENSDARG00000009315 993 1.707 - - - - 0.988 - 0.719 - - calmegin [Source:ZFIN;Acc:ZDB-GENE-060929-708]
31. CABZ01070258.1 ENSDARG00000105687 3643 1.702 - - - - 0.948 - 0.754 - -
32. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.702 - 0.716 - - 0.986 - - - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
33. arhgap11a ENSDARG00000100019 1642 1.698 - - - - 0.990 0.708 - - - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
34. minos1 ENSDARG00000101619 5273 1.695 - 0.733 - - 0.962 - - - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
35. top2a ENSDARG00000024488 4273 1.693 - - - - 0.957 - - - 0.736 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
36. stmn1b ENSDARG00000033655 9491 1.688 - - - - 0.930 0.758 - - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
37. ck2a1 ck2a1 3749 1.688 - - - - 0.983 - - - 0.705
38. rbm25 rbm25 3629 1.687 - - - - 0.974 - - - 0.713
39. si:ch73-131e21.5 si:ch73-131e21.5 1895 1.684 - - - - 0.964 0.720 - - -
40. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.68 - - - - 0.954 - 0.726 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
41. epha4b ENSDARG00000011600 3110 1.677 - - - - 0.944 - 0.733 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
42. znf346 ENSDARG00000060695 3942 1.666 - - - - 0.956 - - - 0.710 zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]
43. camsap2 camsap2 1448 1.65 - - - - - 0.829 0.821 - -
44. notch1b ENSDARG00000052094 7874 1.646 - - - - - 0.859 0.787 - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
45. impdh1b ENSDARG00000029524 7472 1.628 - 0.819 - - - 0.809 - - - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
46. phgdh ENSDARG00000001873 8325 1.627 - 0.762 - - - 0.865 - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
47. zfr ENSDARG00000027109, ENSDARG00000116459 4171 1.62 - 0.797 - - - - 0.823 - - zinc finger RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-378]
48. mad2l1 ENSDARG00000004713 3398 1.598 - - - - 0.886 - - - 0.712 MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
49. znf292b ENSDARG00000043973 3791 1.595 - - - - 0.834 - 0.761 - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
50. smad3b ENSDARG00000010207 951 1.593 - - - - - 0.788 0.805 - - SMAD family member 3b [Source:ZFIN;Acc:ZDB-GENE-030128-4]
51. xpr1 xpr1 840 1.591 - - - - - 0.771 0.820 - -
52. HPDL ENSDARG00000113721 264 1.588 - 0.789 - - - 0.799 - - - 4-hydroxyphenylpyruvate dioxygenase like [Source:HGNC Symbol;Acc:HGNC:28242]
53. C22H10orf76 C22H10orf76 1103 1.586 - 0.832 - - - 0.754 - - -
54. hoxc1a ENSDARG00000070337 1460 1.583 - - - - - 0.806 0.777 - - homeobox C1a [Source:ZFIN;Acc:ZDB-GENE-000822-2]
55. prune2 ENSDARG00000059423, ENSDARG00000116519 646 1.583 - - - - - 0.813 0.770 - - prune homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050309-222]
56. hcfc1b ENSDARG00000012519 3633 1.578 - - - 0.756 - 0.822 - - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
57. casp3a ENSDARG00000017905, ENSDARG00000113754 2819 1.578 - 0.822 - - - - - - 0.756 caspase 3, apoptosis-related cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-011210-1]
58. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.576 - - - - - 0.723 0.853 - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
59. CABZ01072954.1 CABZ01072954.1 2330 1.574 - 0.768 - - - 0.806 - - -
60. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.574 - - - - - 0.760 0.814 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
61. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 1.569 - 0.817 - - - 0.752 - - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
62. pak2b ENSDARG00000018476 4331 1.566 - - - - - - 0.808 - 0.758 p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
63. WDFY3 ENSDARG00000078890 2092 1.564 - 0.792 - - - 0.772 - - - WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
64. ubr5 ENSDARG00000018192 9267 1.563 - 0.759 - - 0.804 - - - - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
65. CBFA2T3 ENSDARG00000079012 6799 1.562 - 0.708 - - - - 0.854 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
66. rnd1l rnd1l 984 1.562 - 0.731 - - - 0.831 - - -
67. gpr27 ENSDARG00000006607 125 1.559 - - - - - 0.749 0.810 - - G protein-coupled receptor 27 [Source:ZFIN;Acc:ZDB-GENE-071022-3]
68. sms ENSDARG00000008155 1192 1.558 - 0.753 - - - - 0.805 - - spermine synthase [Source:ZFIN;Acc:ZDB-GENE-040625-150]
69. jazf1a ENSDARG00000102551 767 1.557 - - - - - 0.755 0.802 - - JAZF zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-060503-492]
70. atp6ap1a ENSDARG00000041417 898 1.556 - - - 0.734 - 0.822 - - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
71. mapk12b ENSDARG00000006409 2246 1.555 - - - 0.756 - 0.799 - - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
72. ipo9 ENSDARG00000016753, ENSDARG00000113327 936 1.553 - 0.794 - - - - 0.759 - - importin 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2953]
73. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 1.552 - - - - - - 0.849 - 0.703 zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
74. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.551 - - - - - 0.802 - 0.749 - serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
75. bxdc2 ENSDARG00000098935 1348 1.551 - 0.835 - - - - - 0.716 - brix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-1]
76. rcor2 ENSDARG00000008278 1678 1.55 - - - - - 0.750 - 0.800 - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
77. atp6v0a2a ENSDARG00000035538 278 1.55 - - - - - 0.831 0.719 - - ATPase H+ transporting V0 subunit a2a [Source:ZFIN;Acc:ZDB-GENE-091113-4]
78. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.549 - - - - - 0.766 0.783 - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
79. nr2f1a ENSDARG00000052695 5037 1.548 - - - - - 0.841 - 0.707 - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
80. ADAM22 ENSDARG00000060532 2259 1.547 - - - - - 0.837 0.710 - - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
81. cacna2d3 ENSDARG00000078760 211 1.546 - - - - - 0.811 0.735 - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
82. CT030046.1 CT030046.1 190 1.546 - - - - - 0.772 0.774 - -
83. DTX4 ENSDARG00000076302 2642 1.544 - - - - - 0.823 0.721 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
84. adnp2b ENSDARG00000028431 4683 1.543 - 0.836 - - - 0.707 - - - ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
85. kcnn1b ENSDARG00000023546 152 1.538 - - - - - 0.801 0.737 - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1b [Source:ZFIN;Acc:ZDB-GENE-060503-397]
86. CDIP1 ENSDARG00000076118 1294 1.536 - 0.765 - - - - 0.771 - - cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18]
87. C7H4orf48 C7H4orf48 1455 1.536 - - - - - 0.736 - 0.800 -
88. klhl8 ENSDARG00000101270 1305 1.532 - - - 0.709 - 0.823 - - - kelch-like family member 8 [Source:ZFIN;Acc:ZDB-GENE-070209-226]
89. wdr33 ENSDARG00000018272 4076 1.531 - 0.728 - - - - - - 0.803 WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040924-3]
90. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 1.531 - 0.737 - - - 0.794 - - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
91. PHTF2 ENSDARG00000102123, ENSDARG00000114503 898 1.53 - 0.770 - - - 0.760 - - - putative homeodomain transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-040711-4]
92. spock2 ENSDARG00000075393 791 1.53 - - - - - 0.784 0.746 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
93. zic2b ENSDARG00000037178, ENSDARG00000112354 993 1.53 - - - - - 0.821 0.709 - - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
94. PRIMA1 PRIMA1 459 1.529 - - - - - 0.727 0.802 - -
95. mepce ENSDARG00000059461 703 1.529 - - - - - 0.757 0.772 - - methylphosphate capping enzyme [Source:ZFIN;Acc:ZDB-GENE-030131-3936]
96. COX18 ENSDARG00000102463 602 1.528 - 0.705 - - - - 0.823 - - cytochrome c oxidase assembly factor COX18 [Source:ZFIN;Acc:ZDB-GENE-080204-88]
97. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.521 - 0.780 - - - 0.741 - - - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
98. ric8a ENSDARG00000007247 229 1.52 - - - - - 0.784 0.736 - - RIC8 guanine nucleotide exchange factor A [Source:ZFIN;Acc:ZDB-GENE-040927-18]
99. pbxip1a ENSDARG00000071015 4960 1.518 - 0.713 - - - - 0.805 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
100. plp1a ENSDARG00000103732 3544 1.518 - - - 0.714 - 0.804 - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]

There are 1927 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA