Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-197g22.1

Gene Name Gene ID Reads Annotation
si:ch211-197g22.1 si:ch211-197g22.1 1










Genes with expression patterns similar to si:ch211-197g22.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-197g22.1 si:ch211-197g22.1 1 2 - 1.000 - - - - - - 1.000
2. htr5al htr5al 6 2 - 1.000 - - - - - - 1.000
3. Metazoa_SRP Metazoa_SRP 1 2 - 1.000 - - - - - - 1.000
4. CABZ01081747.2 CABZ01081747.2 9 2 - 1.000 - - - - - - 1.000
5. pax6l pax6l 54 1.767 - 0.910 - - - - - - 0.857
6. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1 - 1.000 - - - - - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
7. chrm4a ENSDARG00000069254 32 1 - 1.000 - - - - - - - cholinergic receptor, muscarinic 4a [Source:ZFIN;Acc:ZDB-GENE-090410-6]
8. ARID5B ENSDARG00000037196 165 1 - 1.000 - - - - - - - AT-rich interaction domain 5B [Source:ZFIN;Acc:ZDB-GENE-121214-272]
9. cx52.9 ENSDARG00000086453 7 1 - 1.000 - - - - - - - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
10. FP102016.2 FP102016.2 0 1 - - - - - - - - 1.000
11. SYNGAP1_1 SYNGAP1_1 66 1 - 1.000 - - - - - - -
12. vtg4 ENSDARG00000078429, ENSDARG00000116698 0 1 - - - - - - - - 1.000 vitellogenin 4 [Source:ZFIN;Acc:ZDB-GENE-001201-3]
13. CR774179.1 ENSDARG00000086969 3 1 - - - - - - - - 1.000
14. CR790368.1 ENSDARG00000100936 20 1 - 1.000 - - - - - - - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
15. CABZ01044346.1 CABZ01044346.1 12 1 - 1.000 - - - - - - -
16. si:dkey-176f19.7 ENSDARG00000103348 10 1 - - - - - - - - 1.000 si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
17. SLC47A1_2 SLC47A1_2 50 1 - 1.000 - - - - - - -
18. RBBP6_3 RBBP6_3 34 1 - - - - - - - - 1.000
19. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - - - - - - - 1.000 solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
20. si:dkey-259p7.1 si:dkey-259p7.1 59 1 - 1.000 - - - - - - -
21. BX546499.1 ENSDARG00000092602 1 1 - - - - - - - - 1.000
22. BX664622.3 BX664622.3 42 1 - 1.000 - - - - - - -
23. taf4b ENSDARG00000075732 3 1 - 1.000 - - - - - - - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
24. or131-2 ENSDARG00000073812 0 1 - - - - - - - - 1.000 odorant receptor, family H, subfamily 131, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-46]
25. FAM185A ENSDARG00000019142 3 1 - - - - - - - - 1.000 family with sequence similarity 185, member A [Source:ZFIN;Acc:ZDB-GENE-131121-241]
26. FP103003.1_1 FP103003.1_1 6 1 - - - - - - - - 1.000
27. LPL ENSDARG00000087697 18 1 - 1.000 - - - - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
28. si:dkey-4j21.1 17 1 - - - - - - - - 1.000 si:dkey-4j21.1, transcript variant X2
29. si:dkey-208a9.1 si:dkey-208a9.1 3 1 - 1.000 - - - - - - -
30. grk1a ENSDARG00000058803 13 1 - 1.000 - - - - - - - G protein-coupled receptor kinase 1 a [Source:ZFIN;Acc:ZDB-GENE-050823-1]
31. si:dkey-77p23.2 si:dkey-77p23.2 22 1 - 1.000 - - - - - - -
32. FAM46D FAM46D 0 1 - - - - - - - - 1.000
33. PLA2G4C_1 PLA2G4C_1 2 1 - - - - - - - - 1.000
34. si:ch211-215m21.29 si:ch211-215m21.29 5 1 - - - - - - - - 1.000
35. TMPRSS7 5 1 - - - - - - - - 1.000 transmembrane protease, serine 7
36. org ENSDARG00000076474 16 1 - - - - - - - - 1.000 oogenesis-related gene [Source:ZFIN;Acc:ZDB-GENE-050208-584]
37. AL935186.2 ENSDARG00000097345 6 1 - 1.000 - - - - - - -
38. si:dkey-199m13.3 si:dkey-199m13.3 2 1 - 1.000 - - - - - - -
39. rps8b ENSDARG00000057368 68 1 - 1.000 - - - - - - - ribosomal protein S8b [Source:ZFIN;Acc:ZDB-GENE-050522-202]
40. ldlrap1b ENSDARG00000039750 2 1 - - - - - - - - 1.000 low density lipoprotein receptor adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1012]
41. oprd1b ENSDARG00000037159 21 1 - 1.000 - - - - - - - opioid receptor, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8473]
42. si:ch211-196n4.2 si:ch211-196n4.2 0 1 - - - - - - - - 1.000
43. si:dkey-220o10.3 si:dkey-220o10.3 0 1 - - - - - - - - 1.000
44. slc15a1b ENSDARG00000044528 6 1 - - - - - - - - 1.000 solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
45. ZNF337_24 ZNF337_24 16 1 - 1.000 - - - - - - -
46. mxc ENSDARG00000024789 68 1 - 1.000 - - - - - - - myxovirus (influenza virus) resistance C [Source:ZFIN;Acc:ZDB-GENE-030721-7]
47. CYP27A1_2 CYP27A1_2 5 1 - - - - - - - - 1.000
48. si:dkey-274m14.3 si:dkey-274m14.3 7 1 - - - - - - - - 1.000
49. si:dkey-257e4.5 si:dkey-257e4.5 3 1 - 1.000 - - - - - - -
50. C11H3orf83 C11H3orf83 30 1 - 1.000 - - - - - - -
51. 5S_rRNA_13 5S_rRNA_13 0 1 - - - - - - - - 1.000
52. C17H8orf74 C17H8orf74 4 1 - - - - - - - - 1.000
53. EPM2AIP1 EPM2AIP1 4 1 - - - - - - - - 1.000
54. wdr27 ENSDARG00000053386 2 1 - - - - - - - - 1.000 WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
55. FGFBP1 FGFBP1 7 1 - 1.000 - - - - - - -
56. fbxl8 ENSDARG00000054222 3 1 - 1.000 - - - - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
57. tecpr1a ENSDARG00000062515 7 1 - - - - - - - - 1.000 tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
58. si:ch1073-109g21.1 si:ch1073-109g21.1 0 1 - - - - - - - - 1.000
59. si:dkey-47k16.4 ENSDARG00000113005 87 1 - 1.000 - - - - - - - si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131]
60. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
61. NLRP1 NLRP1 54 1 - 1.000 - - - - - - -
62. agtr1a ENSDARG00000018616 1 1 - - - - - - - - 1.000 angiotensin II receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070912-546]
63. scn1a 8 1 - - - - - - - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
64. slc5a5 ENSDARG00000005392 6 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
65. 5_8S_rRNA 5_8S_rRNA 24 1 - 1.000 - - - - - - -
66. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - - - 1.000
67. angptl2a ENSDARG00000024030 8 1 - 1.000 - - - - - - - angiopoietin-like 2a [Source:ZFIN;Acc:ZDB-GENE-080721-15]
68. zgc:172323 ENSDARG00000053201 1 1 - - - - - - - - 1.000 zgc:172323 [Source:ZFIN;Acc:ZDB-GENE-080204-113]
69. CCDC180 ENSDARG00000032372 21 1 - 1.000 - - - - - - - coiled-coil domain containing 180 [Source:ZFIN;Acc:ZDB-GENE-130530-582]
70. GABRA2 ENSDARG00000113737 5 1 - - - - - - - - 1.000 gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
71. KIAA0319 KIAA0319 2 1 - - - - - - - - 1.000
72. SYNPO 2 1 - - - - - - - - 1.000 synaptopodin, transcript variant X2
73. C22H1orf53 C22H1orf53 24 1 - 1.000 - - - - - - -
74. clec3ba ENSDARG00000076541 3 1 - - - - - - - - 1.000 C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
75. slc17a9a ENSDARG00000042954 36 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular nucleotide transporter), member 9a [Source:ZFIN;Acc:ZDB-GENE-081021-1]
76. si:ch211-113a14.17 15 1 - 1.000 - - - - - - - si:ch211-113a14.17
77. SEMA4F ENSDARG00000100308 1 1 - - - - - - - - 1.000 ssemaphorin 4F [Source:HGNC Symbol;Acc:HGNC:10734]
78. si:ch211-12e13.12 ENSDARG00000094737 1 1 - - - - - - - - 1.000 si:ch211-12e13.12 [Source:ZFIN;Acc:ZDB-GENE-070424-121]
79. ttc6 ENSDARG00000104125 7 1 - - - - - - - - 1.000 tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
80. CABZ01060296.1 CABZ01060296.1 9 1 - 1.000 - - - - - - -
81. dym ENSDARG00000042555 1 1 - 1.000 - - - - - - - dymeclin [Source:ZFIN;Acc:ZDB-GENE-091204-348]
82. zgc:73228 zgc:73228 97 1 - 1.000 - - - - - - -
83. CNGB3 CNGB3 7 1 - - - - - - - - 1.000
84. si:dkey-199k11.5 si:dkey-199k11.5 4 1 - - - - - - - - 1.000
85. ARAP1 3 1 - - - - - - - - 1.000 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
86. si:dkey-91i10.2 ENSDARG00000074034 334 1 - 1.000 - - - - - - - si:dkey-91i10.2 [Source:ZFIN;Acc:ZDB-GENE-050208-441]
87. angptl6 ENSDARG00000020265 273 1 - 1.000 - - - - - - - angiopoietin-like 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9735]
88. rhbdd3 ENSDARG00000079816 2 1 - - - - - - - - 1.000 rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
89. OLFM4 OLFM4 6 1 - 1.000 - - - - - - -
90. CABZ01112732.1 ENSDARG00000068453 4 1 - - - - - - - - 1.000 tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
91. CABZ01030692.1 CABZ01030692.1 0 1 - - - - - - - - 1.000
92. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - - - - 1.000 si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
93. arhgap21a ENSDARG00000104295 1 1 - - - - - - - - 1.000 Rho GTPase activating protein 21a [Source:ZFIN;Acc:ZDB-GENE-090918-5]
94. zbtb14 ENSDARG00000098273 36 1 - 1.000 - - - - - - - zinc finger and BTB domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-040426-2946]
95. ENSDARG00000089996 ENSDARG00000089996 17 1 - 1.000 - - - - - - -
96. skila ENSDARG00000023933 2 1 - - - - - - - - 1.000 SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
97. gcgb ENSDARG00000040907 182 1 - 1.000 - - - - - - - glucagon b [Source:ZFIN;Acc:ZDB-GENE-040712-2]
98. coch ENSDARG00000024032 7 1 - 1.000 - - - - - - - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
99. DNAJC11 1 1 - - - - - - - - 1.000 DnaJ heat shock protein family (Hsp40) member C11
100. mpg ENSDARG00000069729 43 1 - 1.000 - - - - - - - N-methylpurine DNA glycosylase [Source:ZFIN;Acc:ZDB-GENE-070410-121]

There are 381 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA