Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-196n4.5

Gene Name Gene ID Reads Annotation
si:ch211-196n4.5 si:ch211-196n4.5 63










Genes with expression patterns similar to si:ch211-196n4.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-196n4.5 si:ch211-196n4.5 63 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. CABZ01081748.1 ENSDARG00000102139 31 2.551 - 0.954 0.763 - - - 0.834 - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
3. pdgfra ENSDARG00000070494, ENSDARG00000113952 6 1.978 - 0.978 - - - 1.000 - - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
4. ACBD3 ENSDARG00000042623 159 1.893 - 0.942 - - - 0.951 - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
5. mmachc ENSDARG00000043877 29 1.862 0.881 - - - - 0.981 - - - methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-030131-3167]
6. si:dkey-85n7.8 ENSDARG00000095793 31 1.859 0.881 0.978 - - - - - - - si:dkey-85n7.8 [Source:ZFIN;Acc:ZDB-GENE-110411-127]
7. CABZ01070852.2 ENSDARG00000114999 16 1.838 0.881 - - - - 0.957 - - -
8. si:dkey-104n9.1 ENSDARG00000093042 41 1.833 - - - - - 1.000 0.833 - - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
9. dnah7 ENSDARG00000060165 21 1.811 - 0.978 - - - - 0.833 - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
10. si:dkey-13m3.1 si:dkey-13m3.1 45 1.775 - 0.942 - - - - 0.833 - -
11. tob1a ENSDARG00000032619 3 1.765 0.881 - - - - 0.884 - - - transducer of ERBB2, 1a [Source:ZFIN;Acc:ZDB-GENE-031030-4]
12. plat ENSDARG00000062707 491 1.758 - 0.955 - - - - 0.803 - - plasminogen activator, tissue [Source:ZFIN;Acc:ZDB-GENE-081104-181]
13. vipr1b ENSDARG00000059058 62 1.75 0.881 - - - - - 0.869 - - vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
14. cx41.8 cx41.8 7 1.746 - - - 0.746 - 1.000 - - -
15. tnnt2a ENSDARG00000020610 313 1.74 - 0.978 - - - - - 0.762 - troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
16. TTF1_3 TTF1_3 215 1.732 - 0.908 - - - - 0.824 - -
17. CR762483.1 ENSDARG00000114454 44 1.73 - - - - - 0.900 0.830 - - growth-regulated alpha protein-like [Source:NCBI gene;Acc:101883994]
18. si:dkey-19n13.5 si:dkey-19n13.5 36 1.717 - 0.857 - - - 0.860 - - -
19. si:ch211-160d14.9 8 1.714 0.881 - - - - - 0.833 - - si:ch211-160d14.9, transcript variant X1
20. SOX8 SOX8 22 1.714 0.881 - - - - - 0.833 - -
21. F2RL3 ENSDARG00000079399 29 1.714 0.881 - - - - - 0.833 - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
22. 5S_rRNA_10 5S_rRNA_10 2 1.714 0.881 - - - - - 0.833 - -
23. wnt8b ENSDARG00000006911 98 1.709 - 0.978 0.731 - - - - - - wingless-type MMTV integration site family, member 8b [Source:ZFIN;Acc:ZDB-GENE-990415-279]
24. LRRC61 ENSDARG00000077357 55 1.705 - 0.968 - - - - 0.737 - - leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
25. BX571811.1 ENSDARG00000105621 25 1.704 - 0.846 - - - - - 0.858 -
26. si:zfos-979f1.2 ENSDARG00000011652 24 1.7 0.881 0.819 - - - - - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
27. si:ch211-260m19.8 si:ch211-260m19.8 33 1.692 - 0.933 0.759 - - - - - -
28. CT025934.2 CT025934.2 22 1.69 - 0.857 - - - - 0.833 - -
29. MYO7B MYO7B 8 1.689 - - - - - 0.856 0.833 - -
30. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1.676 0.881 - - - - - 0.795 - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
31. ippk ENSDARG00000003446 51 1.673 - 0.951 0.722 - - - - - - inositol 1,3,4,5,6-pentakisphosphate 2-kinase [Source:ZFIN;Acc:ZDB-GENE-050327-41]
32. UBAP1L UBAP1L 130 1.654 - 0.857 - - - 0.797 - - -
33. zgc:152863 ENSDARG00000099969 99 1.653 - 0.908 - - - - 0.745 - - zgc:152863 [Source:ZFIN;Acc:ZDB-GENE-061103-463]
34. U1_50 U1_50 62 1.651 - 0.893 0.758 - - - - - -
35. prkacbb_1 ENSDARG00000059125 83 1.647 - 0.929 0.718 - - - - - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
36. il15 ENSDARG00000052361 219 1.635 0.815 0.820 - - - - - - - interleukin 15 [Source:ZFIN;Acc:ZDB-GENE-060213-2]
37. si:dkey-3h3.3 ENSDARG00000067718 225 1.634 - 0.802 - - - - 0.832 - - si:dkey-3h3.3 [Source:ZFIN;Acc:ZDB-GENE-060526-299]
38. IQUB ENSDARG00000061899 91 1.632 - 0.807 - - - - 0.825 - - IQ motif and ubiquitin domain containing [Source:ZFIN;Acc:ZDB-GENE-110421-1]
39. slc6a6b ENSDARG00000098438 7 1.632 0.881 - - - - 0.751 - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
40. gpr155a ENSDARG00000090804 27 1.627 0.881 - 0.746 - - - - - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
41. CABZ01069081.1 CABZ01069081.1 16 1.62 0.881 - - - - - 0.739 - -
42. ubxn10 ENSDARG00000052535 24 1.62 0.881 - - - - - 0.739 - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
43. asic2 ENSDARG00000006849 18 1.618 0.881 - - - - 0.737 - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
44. cmlc1 ENSDARG00000032976 455 1.618 0.881 - - - - - - 0.737 - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
45. sele ENSDARG00000009123 122 1.604 0.881 0.723 - - - - - - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
46. cacnb2a ENSDARG00000099045 374 1.596 0.881 - - - - - 0.715 - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
47. gp1bb ENSDARG00000074441 116 1.594 0.881 0.713 - - - - - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
48. ptn ENSDARG00000102340 229 1.586 - 0.817 0.769 - - - - - - pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
49. sh3bp4 ENSDARG00000030104, ENSDARG00000109621 51 1.583 - - - - - 0.751 0.832 - - SH3-domain binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-509]
50. ccdc127a 39 1.574 - - 0.742 - - - 0.832 - - coiled-coil domain containing 127a, transcript variant X2
51. VPS37B ENSDARG00000039319, ENSDARG00000109293 150 1.567 - 0.755 - - - 0.812 - - - vacuolar protein sorting 37 homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-254]
52. bbc3 ENSDARG00000069282 79 1.564 - 0.846 - - - 0.718 - - - BCL2 binding component 3 [Source:ZFIN;Acc:ZDB-GENE-070119-4]
53. rx3 ENSDARG00000052893 43 1.56 - - - 0.727 - - 0.833 - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
54. si:ch73-167f18.3 si:ch73-167f18.3 78 1.549 - 0.798 - - - 0.751 - - -
55. rps6kal ENSDARG00000037574, ENSDARG00000115099 294 1.539 - 0.825 0.714 - - - - - - ribosomal protein S6 kinase a, like [Source:ZFIN;Acc:ZDB-GENE-030131-9616]
56. slco5a1 slco5a1 383 1.534 0.703 - - - - - 0.831 - -
57. PXMP4 ENSDARG00000114885 212 1.517 - 0.777 - - - - 0.740 - - peroxisomal membrane protein 4 [Source:HGNC Symbol;Acc:HGNC:15920]
58. asic1b ENSDARG00000101866 61 1.503 - - 0.784 - - - - 0.719 - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
59. tmem107l ENSDARG00000088398, ENSDARG00000109909 208 1.488 - 0.752 - - - - 0.736 - - transmembrane protein 107 like [Source:ZFIN;Acc:ZDB-GENE-090313-269]
60. CABZ01068473.1 CABZ01068473.1 67 1.488 - 0.716 0.772 - - - - - -
61. CU469544.1 CU469544.1 219 1.487 - 0.770 0.717 - - - - - -
62. ZNF800 ZNF800 72 1.48 - 0.743 - - - 0.737 - - -
63. CABZ01080142.1 CABZ01080142.1 52 1.479 0.773 - - - - - 0.706 - -
64. trhrb ENSDARG00000036159 11 1.463 - - - - - 0.715 0.748 - - thyrotropin-releasing hormone receptor b [Source:ZFIN;Acc:ZDB-GENE-060503-382]
65. CABZ01061914.2 CABZ01061914.2 2 1 - - - - - 1.000 - - -
66. soul5l ENSDARG00000089879 20 1 - - - - - 1.000 - - - heme-binding protein soul5, like [Source:ZFIN;Acc:ZDB-GENE-121214-315]
67. fut7 ENSDARG00000044775 25 1 - - - - - 1.000 - - - fucosyltransferase 7 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-997]
68. BX120005.1 ENSDARG00000089327 1 1 - - - - - 1.000 - - - cytotoxic and regulatory T-cell molecule [Source:NCBI gene;Acc:101884219]
69. APOBEC2 APOBEC2 9 1 - - - - - 1.000 - - -
70. trpm3 ENSDARG00000039181 2 1 - - - - - 1.000 - - - transient receptor potential cation channel, subfamily M, member 3 [Source:ZFIN;Acc:ZDB-GENE-060531-95]
71. tdrd9 ENSDARG00000013453 22 1 - 1.000 - - - - - - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
72. hsd3b1 ENSDARG00000069926 35 1 - - - - - 1.000 - - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-081105-30]
73. GPR20 ENSDARG00000077427 1 1 - - - - - 1.000 - - - G protein-coupled receptor 20 [Source:ZFIN;Acc:ZDB-GENE-140106-136]
74. FNDC3B FNDC3B 2 1 - - - - - 1.000 - - -
75. pdca ENSDARG00000011886 1 1 - - - - - 1.000 - - - phosducin a [Source:ZFIN;Acc:ZDB-GENE-031023-1]
76. si:ch211-238g23.1 ENSDARG00000055746 23 1 - - - - - 1.000 - - - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
77. apnl ENSDARG00000090900 21 1 - - - - - 1.000 - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
78. galnt14 ENSDARG00000023448 102 1 1.000 - - - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14) [Source:ZFIN;Acc:ZDB-GENE-041014-351]
79. DTX4_1 ENSDARG00000076302 31 1 - - - - - 1.000 - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
80. si:ch211-250m6.4 ENSDARG00000068869, ENSDARG00000116106 1 1 - - - - - 1.000 - - - si:ch211-250m6.4 [Source:ZFIN;Acc:ZDB-GENE-061009-21]
81. fam19a1 7 1 - - - - - 1.000 - - - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
82. si:ch73-285p12.4 ENSDARG00000054548 1 1 - - - - - 1.000 - - - si:ch73-285p12.4 [Source:ZFIN;Acc:ZDB-GENE-110411-145]
83. crhb ENSDARG00000027657 9 1 - - - - - 1.000 - - - corticotropin releasing hormone b [Source:ZFIN;Acc:ZDB-GENE-041114-75]
84. irx4a ENSDARG00000035648 71 1 - - - - - 1.000 - - - iroquois homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1825]
85. Metazoa_SRP_13 Metazoa_SRP_13 7 1 - - - - - 1.000 - - -
86. zgc:153896 ENSDARG00000003977 142 1 1.000 - - - - - - - - zgc:153896 [Source:ZFIN;Acc:ZDB-GENE-060825-119]
87. gdf6b ENSDARG00000005510 106 1 - - - - - 1.000 - - - growth differentiation factor 6b [Source:ZFIN;Acc:ZDB-GENE-980526-442]
88. slc38a3a ENSDARG00000027065, ENSDARG00000112018 95 1 - - - - - 1.000 - - - solute carrier family 38, member 3a [Source:ZFIN;Acc:ZDB-GENE-070615-25]
89. si:ch211-155d24.7 si:ch211-155d24.7 17 1 - - - - - 1.000 - - -
90. f8 ENSDARG00000101385 1 1 - - - - - 1.000 - - - coagulation factor VIII, procoagulant component [Source:ZFIN;Acc:ZDB-GENE-090629-2]
91. ADAMTS15_1 ADAMTS15_1 11 1 - - - - - 1.000 - - -
92. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - - - 1.000 - - - potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
93. wdr21 ENSDARG00000003197, ENSDARG00000110654 4 1 - - - - - 1.000 - - - WD repeat domain 21 [Source:ZFIN;Acc:ZDB-GENE-040109-2]
94. srd5a3 ENSDARG00000043307 142 1 - - - - - 1.000 - - - steroid 5 alpha-reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7915]
95. ipp ENSDARG00000075339 3 1 - - - - - 1.000 - - - intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
96. si:rp71-31c2.1 si:rp71-31c2.1 1 1 - - - - - 1.000 - - -
97. si:ch211-209l18.5 si:ch211-209l18.5 1 1 - - - - - 1.000 - - -
98. EBF3 EBF3 16 1 - - - - - 1.000 - - -
99. prom1b ENSDARG00000034007, ENSDARG00000111216, ENSDARG00000111262 14 1 - - - - - 1.000 - - - prominin 1 b [Source:ZFIN;Acc:ZDB-GENE-031003-1]
100. sema4aa ENSDARG00000077103 4 1 - - - - - 1.000 - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Aa [Source:ZFIN;Acc:ZDB-GENE-110411-86]

There are 1380 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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